Insertion and deletion variants (indels) within poly glycine tracts of fused in sarcoma (FUS) were initially reported as causative of disease in amyotrophic lateral sclerosis (ALS). Subsequent studies identified similar indels in controls and suggested that these indels may confer susceptibility to ALS. We aimed to elucidate the role of previously published and novel exonic indels in FUS in an extensive cohort of 630 ALS patients and 1063 controls. We detected indels in FUS exons 5, 6, 12 and 14 with similar frequencies in patients (0.95%) and controls (0.75%). Exonic indels in poly glycine tracts were also observed with similar frequencies. The largest indel (p.Gly138_Tyr143del) was observed in one control. In one patient, a 3 base pair deletion in exon 14 (p.Gly475del) was identified, however in-vitro studies did not reveal abnormal localization of p.Gly475del mutant FUS. These findings suggest that not all exonic indels in FUS cause disease.
doi:10.1016/j.neurobiolaging.2010.09.029
PMCID: PMC3130814
PMID: 21074900
Kouri, Naomi | Murray, Melissa E. | Hassan, Anhar | Rademakers, Rosa | Uitti, Ryan J. | Boeve, Bradley F. | Graff-Radford, Neill R. | Wszolek, Zbigniew K. | Litvan, Irene | Josephs, Keith A. | Dickson, Dennis W.
Brain
2011;134(11):3264-3275.
Patients with corticobasal degeneration can present with several different clinical syndromes, making ante-mortem diagnosis a challenge. Corticobasal syndrome is the clinical phenotype originally described for corticobasal degeneration, characterized by asymmetric rigidity and apraxia, cortical sensory deficits, dystonia and myoclonus. Some patients do not develop these features, but instead have clinical features consistent with the Richardson syndrome presentation of progressive supranuclear palsy, characterized by postural instability, early unexplained falls, vertical supranuclear gaze palsy, symmetric motor disability and dysphagia. The aim of this study was to identify differences in corticobasal degeneration presenting with corticobasal syndrome (n = 11) or Richardson syndrome (n = 15) with respect to demographic, clinical and neuropathological features. Corticobasal degeneration cases were also compared with patients with pathologically proven progressive supranuclear palsy with Richardson syndrome (n = 15). Cases with corticobasal degeneration, regardless of presentation, shared histopathological and tau biochemical characteristics, but they had differing densities of tau pathology in neuroanatomical regions that correlated with their clinical presentation. In particular, those with corticobasal syndrome had greater tau pathology in the primary motor and somatosensory cortices and putamen, while those with Richardson syndrome had greater tau pathology in limbic and hindbrain structures. Compared with progressive supranuclear palsy, patients with corticobasal degeneration and Richardson syndrome had less neuronal loss in the subthalamic nucleus, but more severe neuronal loss in the medial substantia nigra and greater atrophy of the anterior corpus callosum. Clinically, they had more cognitive impairment and frontal behavioural dysfunction. The results suggest that Richardson syndrome can be a clinicopathological presentation of corticobasal degeneration. Atrophy of anterior corpus callosum may be a potential neuroimaging marker to differentiate corticobasal degeneration from progressive supranuclear palsy in patients with Richardson syndrome.
doi:10.1093/brain/awr234
PMCID: PMC3212714
PMID: 21933807
pathology; immunocytochemistry; progressive supranuclear palsy; tau protein; corticobasal degeneration
Puschmann, Andreas | Verbeeck, Christophe | Heckman, Michael G. | Soto-Ortolaza, Alexandra I. | Lynch, Timothy | Jasinska-Myga, Barbara | Opala, Grzegorz | Krygowska-Wajs, Anna | Barcikowska, Maria | Uitti, Ryan J. | Wszolek, Zbigniew K. | Ross, Owen A.
A role for the immune system in the pathogenesis of Parkinson’s Disease (PD) has previously been suggested. A recent genome-wide association (GWA) study identified an association between one single nucleotide polymorphism (SNP) in the human leucocyte antigen (HLA) region (HLA-DRA rs3129882) and PD in a population of American patients with European ancestry. In that study, the minor rs3129882 allele (G) was associated with an increased risk of PD under an additive model. Due to the increased likelihood of obtaining false positive results in GWA studies compared to studies conducted based on a hypothesis-driven approach, repeated validation of findings from GWA studies are necessary. Herein, we evaluated the association between rs3129882 and PD in three different Caucasian patient-control series (combined 1,313 patients and 1,305 controls) from the US, Ireland, and Poland. We observed no association (OR: 0.96, P=0.50) between rs3129882 and PD when analyzing our data under an additive or dominant model. In contrast, when examined under a recessive model, the GG genotype was observed to be protective in the Irish (OR: 0.55, P=0.008), Polish (OR: 0.67, P=0.040) and combined (OR: 0.75, P=0.006) patient-control series. In view of these diverging results, the exact role of genetic variation at the HLA region and susceptibility to PD remains to be resolved.
doi:10.1016/j.parkreldis.2011.03.008
PMCID: PMC3109190
PMID: 21482477
Association studies; Parkinson’s disease; Human leukocyte antigen; HLA; HLA-DRA; Immune system; Genetics
Potts, Lisa F | Cambon, Alex C | Ross, Owen A | Rademakers, Rosa | Dickson, Dennis W | Uitti, Ryan J | Wszolek, Zbigniew K | Rai, Shesh N | Farrer, Matthew J | Hein, David W | Litvan, Irene
Background
There are no known causes for progressive supranuclear palsy (PSP). The microtubule associated protein tau (MAPT) H1 haplotype is the major genetic factor associated with risk of PSP, with both oxidative stress and mitochondrial dysfunction also implicated. We investigated whether specific single nucleotide polymorphisms (SNPs) in genes encoding enzymes of xenobiotic detoxification, mitochondrial functioning, or oxidative stress response, including debrisoquine 4-hydroxylase, paraoxonase 1 and 2, N-acetyltransferase 1 and 2 (NAT2), superoxide dismutase 1 and 2, and PTEN-induced putative kinase are associated with PSP.
Methods
DNA from 553 autopsy-confirmed Caucasian PSP cases (266 females, 279 males; age at onset 68 ± 8 years; age at death 75 ± 8) from the Society for PSP Brain Bank and 425 clinical control samples (197 females, 226 males; age at draw 72 ± 11 years) from healthy volunteers were genotyped using Taqman PCR and the SequenomiPLEX Gold assay.
Results
The proportion of NAT2 rapid acetylators compared to intermediate and slow acetylators was larger in cases than in controls (OR = 1.82, p < 0.05). There were no allelic or genotypic associations with PSP for any other SNPs tested with the exception of MAPT (p < 0.001).
Conclusions
Our results show that NAT2 rapid acetylator phenotype is associated with PSP, suggesting that NAT2 may be responsible for activation of a xenobiotic whose metabolite is neurotoxic. Although our results need to be further confirmed in an independent sample, NAT2 acetylation status should be considered in future genetic and epidemiological studies of PSP.
doi:10.1186/1471-2350-13-16
PMCID: PMC3344705
PMID: 22424094
Progressive supranuclear palsy (PSP); N-acetyltransferase 2 (NAT2); Tauopathy; Single nucleotide polymorphisms (SNPs); Parkinson's disease (PD)
Xiao, Jianfeng | Zhao, Yu | Bastian, Robert W. | Perlmutter, Joel S. | Racette, Brad A. | Tabbal, Samer D. | Karimi, Morvarid | Paniello, Randal C. | Wszolek, Zbigniew K. | Uitti, Ryan J. | Van Gerpen, Jay A. | Simon, David K. | Tarsy, Daniel | Hedera, Peter | Truong, Daniel D. | Frei, Karen P. | Blitzer, Andrew | Rudzińska, Monika | Pfeiffer, Ronald F. | Le, Carrie | LeDoux, Mark S.
Sequence variants in coding and non-coding regions of THAP1 have been associated with primary dystonia. In this study, 1446 Caucasian subjects with mainly adult-onset primary dystonia and 1520 controls were genotyped for a variant located in the 5’-untranslated region of THAP1 (c.-237_236GA>TT). Minor allele frequencies were 62/2892 (2.14%) and 55/3040 (1.81%) in subjects with dystonia and controls, respectively (P = 0.202). Subgroup analyses by gender and anatomical distribution also failed to attain statistical significance. In addition, there was no effect of the TT variant on expression levels of THAP1 transcript or protein. Our findings indicate that the c.-237_236GA>TT THAP1 sequence variant does not increase risk for adult-onset primary dystonia in Caucasians.
doi:10.1002/mds.23551
PMCID: PMC3171986
PMID: 21370264
dystonia; DYT6; high-resolution melting; untranslated region; THAP1
Höglinger, Günter U. | Melhem, Nadine M. | Dickson, Dennis W. | Sleiman, Patrick M.A. | Wang, Li-San | Klei, Lambertus | Rademakers, Rosa | de Silva, Rohan | Litvan, Irene | Riley, David E. | van Swieten, John C. | Heutink, Peter | Wszolek, Zbigniew K. | Uitti, Ryan J. | Vandrovcova, Jana | Hurtig, Howard I. | Gross, Rachel G. | Maetzler, Walter | Goldwurm, Stefano | Tolosa, Eduardo | Borroni, Barbara | Pastor, Pau | Cantwell, Laura B. | Han, Mi Ryung | Dillman, Allissa | van der Brug, Marcel P. | Gibbs, J Raphael | Cookson, Mark R. | Hernandez, Dena G. | Singleton, Andrew B. | Farrer, Matthew J. | Yu, Chang-En | Golbe, Lawrence I. | Revesz, Tamas | Hardy, John | Lees, Andrew J. | Devlin, Bernie | Hakonarson, Hakon | Müller, Ulrich | Schellenberg, Gerard D.
Progressive supranuclear palsy (PSP) is a movement disorder with prominent tau neuropathology. Brain diseases with abnormal tau deposits are called tauopathies, the most common being Alzheimer’s disease. Environmental causes of tauopathies include repetitive head trauma associated with some sports. To identify common genetic variation contributing to risk for tauopathies, we carried out a genome-wide association study of 1,114 PSP cases and 3,247 controls (Stage 1) followed up by a second stage where 1,051 cases and 3,560 controls were genotyped for Stage 1 SNPs that yielded P ≤ 10−3. We found significant novel signals (P < 5 × 10−8) associated with PSP risk at STX6, EIF2AK3, and MOBP. We confirmed two independent variants in MAPT affecting risk for PSP, one of which influences MAPT brain expression. The genes implicated encode proteins for vesicle-membrane fusion at the Golgi-endosomal interface, for the endoplasmic reticulum unfolded protein response, and for a myelin structural component.
doi:10.1038/ng.859
PMCID: PMC3125476
PMID: 21685912
Rasagiline has been studied as a Parkinson disease (PD) neuroprotective agent in 2 major clinical trials, utilizing the delayed-start design in an attempt to separate symptomatic drug benefits from a disease-modifying effect. The ostensibly positive outcomes of these studies, however, are obscured by potential confounding factors that seem intrinsic to this trial design, including 1) very small changes in clinical outcome measures that could easily be overshadowed by other influences; 2) probable incomplete blinding to study end; 3) subjective components of the Unified Parkinson's Disease Rating Scale (UPDRS) scoring system; and 4) practice influences from repeated scoring. Interpretation of the recent Attenuation of Disease Progression with Azilect Given Once-daily (ADAGIO) trials is especially problematic given 1) divergent results with the 2 symptomatically beneficial doses and 2) variability in UPDRS scores with active rasagiline, which was twice the magnitude of the major finding of the study. These studies further illustrate the difficulty in documenting a disease-modifying effect when considering a PD drug with symptomatic benefit.
GLOSSARY
= Attenuation of Disease Progression with Azilect Given Once-daily trial;
= Parkinson disease;
= TVP-1012 in Early Monotherapy for PD Outpatients study;
= Unified Parkinson's Disease Rating Scale.
doi:10.1212/WNL.0b013e3181d7d8e2
PMCID: PMC2865777
PMID: 20368634
doi:10.1212/WNL.0b013e3181d7d93b
PMCID: PMC2865778
PMID: 20368636
A functional variant in the Histamine N-Methyltransferase gene (HNMT – rs11558538) resulting in a threonine to isoleucine substitution (Thr105Ile), has been shown to impair histamine degradation. Two recent studies reported that the threonine allele of this polymorphism might be a risk factor for Parkinson disease (PD) and essential tremor (ET) development. Although PD and ET are considered different entities, they share some clinical and pathological features, suggesting a possible joint etiology. In this study we assess the role of the Thr105Ile variant in PD and ET development, genotyping the variant in a North American Caucasian PD and ET case-control series. Statistical analysis did not identify any significant association between this variant and PD or ET; therefore, our findings do not support the HNMT Thr105Ile variant as a factor in disease development or a genetic link between the disorders.
doi:10.1016/j.parkreldis.2009.08.011
PMCID: PMC2845175
PMID: 19773194
Parkinson Disease; Essential Tremor; Histamine; HNMT
Variants in the dopamine receptor D3 (DRD3) and HCLS1 binding protein 3 (HS1BP3) have been nominated as risk factors for Essential Tremor (ET). Although ET and Parkinson disease (PD) are considered different entities, they have many overlapping clinical and pathological features. We aim to evaluate the role of the Ser9Gly variant in DRD3 and Ala265Gly in HS1BP3 in PD development. To this end, we genotyped these two variants in a PD matched case-control series from the United States. Statistical analysis failed to identify significant differences in the frequency of these variants between the case and control groups, therefore our results do not support a role for these DRD3 and HS1BP3 variants in PD.
doi:10.1016/j.neulet.2009.05.084
PMCID: PMC2757072
PMID: 19524641
Essential tremor; Parkinson disease; DRD3; HS1BP3
Wider, Christian | Lincoln, Sarah J. | Heckman, Michael G. | Diehl, Nancy N. | Stone, Jeremy T. | Haugarvoll, Kristoffer | Aasly, Jan O. | Gibson, J. Mark | Lynch, Timothy | Rajput, Alex | Rajput, Michele L. | Uitti, Ryan J. | Wszolek, Zbigniew K. | Farrer, Matthew J. | Ross, Owen A.
Attempts at replicating the first genome-wide association study (GWAS) in Parkinson's disease (PD) have not successfully identified genetic risk factors. The present study reevaluates data from the GWAS and focuses on the SNP (rs11155313, located in the Phactr2 gene) with the lowest P-value in the Tier 2 patient-control series of the first PD GWAS. We employed four case-control series to examine the nominated SNP rs11155313 and identified association in US (OR: 1.39, P=0.032), Canadian (OR: 1.41, P=0.014) and Irish (OR: 1.44, P=0.034) patient-control series, but not in the Norwegian series (OR: 1.15, P=0.27). When combining all four series the observed trend was statistically significant (OR: 1.30, P<0.001). This study shows reappraisal of publicly available results of GWAS may help nominate new risk factors for PD.
doi:10.1016/j.neulet.2009.02.009
PMCID: PMC2684848
PMID: 19429005
Genome-wide association; Parkinson's disease; Phactr2
Ross, Owen A. | Soto, Alexandra I. | Vilariño-Güell, Carles | Heckman, Michael G. | Diehl, Nancy N. | Hulihan, Mary M. | Aasly, Jan O. | Sando, Sigrid | Mark Gibson, J. | Lynch, Timothy | Krygowska-Wajs, Anna | Opala, Grzegorz | Barcikowska, Maria | Czyzewski, Krzysztof | Uitti, Ryan J. | Wszolek, Zbigniew K. | Farrer, Matthew J.
Variants in the Omi/HtrA2 gene have been nominated as a cause of Parkinson’s disease. This sequencing study of Omi/HtrA2 in 95 probands with apparent autosomal dominant inheritance of Parkinson’s disease did not identify any pathogenic mutations. In addition, there was no association between common variations in the Omi/HtrA2 gene and susceptibility to Parkinson’s disease in any of our four patient-control series (n=2373). Taken together our results do not support a role for Omi/HtrA2 variants in the pathogenesis of Parkinson’s disease.
doi:10.1016/j.parkreldis.2008.08.003
PMCID: PMC2614082
PMID: 18790661
PARK13; PD; HtrA2; mitochondria; neurodegeneration
Fujishiro, Hiroshige | Ferman, Tanis J. | Boeve, Bradley F. | Smith, Glenn E. | Graff-Radford, Neill R. | Uitti, Ryan J. | Wszolek, Zbigniew K. | Knopman, David S. | Petersen, Ronald C. | Parisi, Joseph E. | Dickson, Dennis W.
There is limited information on the validity of the pathological criteria of the Third Consortium on Dementia with Lewy bodies (CDLB) and none based upon prospectively diagnosed cases. In this study the core clinical features of dementia with Lewy bodies (DLB) and the suggestive clinical feature of rapid eye movement sleep behavior disorder were assessed using a battery of standardized clinical instruments in 76 patients with the clinical diagnosis of either DLB or Alzheimer disease. At autopsy, 29 patients had high-likelihood, 17 had intermediate-likelihood and 6 had low-likelihood DLB pathology. The frequency of core clinical features and the accuracy of the clinical diagnosis of probable DLB were significantly greater in high-likelihood than in low-likelihood cases. This is consistent with the concept that the DLB clinical syndrome is directly related to Lewy body pathology and inversely related to Alzheimer pathology. Thus, the Third CDLB neuropathological criteria scheme performed reasonably well and is useful for estimating the likelihood of the premortem DLB syndrome based upon postmortem findings. In view of differences in the frequency of clinically probable DLB in cases with Braak NFT stages V (90%) and VI (20%) and diffuse cortical Lewy bodies, a possible modification of the scheme considering cases with NFT stage VI to be low-likelihood DLB is suggested.
doi:10.1097/NEN.0b013e31817d7a1d
PMCID: PMC2745052
PMID: 18596548
Alzheimer disease; α-synuclein; Clinicopathologic correlation; Diagnostic criteria; Dementia with Lewy bodies; Prospective study; REM behavior disorder
Haugarvoll, Kristoffer | Toft, Mathias | Skipper, Lisa | Heckman, Michael G | Crook, Julia E | Soto, Alexandra | Ross, Owen A | Hulihan, Mary M | Kachergus, Jennifer M | Sando, Sigrid B | White, Linda R | Lynch, Timothy | Gibson, J Mark | Uitti, Ryan J | Wszolek, Zbigniew K | Aasly, Jan O | Farrer, Matthew J
Herein, we investigate whether single-nucleotide polymorphisms (SNPs) across the PARK10 locus are associated with susceptibility to Parkinson's disease (PD) or age at onset (AAO) of disease. One hundred and eighty-eight SNPs were genotyped across the PARK10 locus in 180 PD patients and 180 controls from central Norway (stage 1). We then used the linkage disequilibrium (LD) structure from stage 1 to select 75 SNPs for genotyping in 186 patients and 186 controls from Ireland (stage 2). Nineteen SNPs were selected from this and previous studies for follow-up in an extended Norwegian series (530 patients and 1142 controls), the Irish series and a US series (221 patients and 221 controls) (stage 3). After correction for multiple testing, markers within ubiquitin specific peptidase 24 (USP24) are significantly associated with PD within Norwegian, Irish, and US series combined (rs13312: odds ratio (OR) 0.78, P<0.001; rs487230: OR 0.80, P=0.001). Independently, the association for rs13312 is strongest in the extended Norwegian series (OR 0.76, P=0.005), although not significant after correction for multiple testing (P≤0.003 is considered significant). ORs in the Irish series are almost identical, and a similar but a weaker effect was observed for the US series. No marker showed consistent association with AAO. Our data indicate that genetic variability in USP24 is associated with PD. Although our work extends and confirms a previous report, the observed effect size does not explain the PARK10 linkage peak.
doi:10.1038/ejhg.2008.187
PMCID: PMC2986168
PMID: 18854859
Parkinson's disease; linkage study; association study; risk factors; USP24
Cooper, Oliver | Seo, Hyemyung | Andrabi, Shaida | Guardia-Laguarta, Cristina | Graziotto, John | Sundberg, Maria | McLean, Jesse R. | Carrillo-Reid, Luis | Xie, Zhong | Osborn, Teresia | Hargus, Gunnar | Deleidi, Michela | Lawson, Tristan | Bogetofte, Helle | Perez-Torres, Eduardo | Clark, Lorraine | Moskowitz, Carol | Mazzulli, Joseph | Chen, Li | Volpicelli-Daley, Laura | Romero, Norma | Jiang, Houbo | Uitti, Ryan J. | Huang, Zhigao | Opala, Grzegorz | Scarffe, Leslie A. | Dawson, Valina L. | Klein, Christine | Feng, Jian | Ross, Owen A. | Trojanowski, John Q. | Lee, Virginia M.-Y. | Marder, Karen | Surmeier, D. James | Wszolek, Zbigniew K. | Przedborski, Serge | Krainc, Dimitri | Dawson, Ted M. | Isacson, Ole
Parkinson's disease (PD) is a common neurodegenerative disease caused by genetic and environmental factors. We analyzed induced pluripotent stem cell (iPSC)-derived neural cells from PD patients and presymptomatic individuals carrying mutations in the PINK1 and LRRK2 genes, and healthy control subjects. We measured several aspects of mitochondrial responses in the iPSC-derived neural cells including production of reactive oxygen species, mitochondrial respiration, proton leakage and intraneuronal movement of mitochondria. Cellular vulnerability associated with mitochondrial function in iPSC-derived neural cells from PD patients and at-risk individuals could be rescued with coenzyme Q10, rapamycin or the LRRK2 kinase inhibitor GW5074. Analysis of mitochondrial responses in iPSC-derived neural cells from PD patients carrying different mutations provides insights into convergence of cellular disease mechanisms between different familial forms of PD and highlights the importance of oxidative stress and mitochondrial dysfunction in PD.
doi:10.1126/scitranslmed.3003985
PMCID: PMC3462009
PMID: 22764206
Wray, Selina | Self, Matthew | Lewis, Patrick A. | Taanman, Jan-Willem | Ryan, Natalie S. | Mahoney, Colin J. | Liang, Yuying | Devine, Michael J. | Sheerin, Una-Marie | Houlden, Henry | Morris, Huw R. | Healy, Daniel | Marti-Masso, Jose-Felix | Preza, Elisavet | Barker, Suzanne | Sutherland, Margaret | Corriveau, Roderick A. | D'Andrea, Michael | Schapira, Anthony H. V. | Uitti, Ryan J. | Guttman, Mark | Opala, Grzegorz | Jasinska-Myga, Barbara | Puschmann, Andreas | Nilsson, Christer | Espay, Alberto J. | Slawek, Jaroslaw | Gutmann, Ludwig | Boeve, Bradley F. | Boylan, Kevin | Stoessl, A. Jon | Ross, Owen A. | Maragakis, Nicholas J. | Van Gerpen, Jay | Gerstenhaber, Melissa | Gwinn, Katrina | Dawson, Ted M. | Isacson, Ole | Marder, Karen S. | Clark, Lorraine N. | Przedborski, Serge E. | Finkbeiner, Steven | Rothstein, Jeffrey D. | Wszolek, Zbigniew K. | Rossor, Martin N. | Hardy, John | Borlongan, Cesar V.
Our understanding of the molecular mechanisms of many neurological disorders has been greatly enhanced by the discovery of mutations in genes linked to familial forms of these diseases. These have facilitated the generation of cell and animal models that can be used to understand the underlying molecular pathology. Recently, there has been a surge of interest in the use of patient-derived cells, due to the development of induced pluripotent stem cells and their subsequent differentiation into neurons and glia. Access to patient cell lines carrying the relevant mutations is a limiting factor for many centres wishing to pursue this research. We have therefore generated an open-access collection of fibroblast lines from patients carrying mutations linked to neurological disease. These cell lines have been deposited in the National Institute for Neurological Disorders and Stroke (NINDS) Repository at the Coriell Institute for Medical Research and can be requested by any research group for use in in vitro disease modelling. There are currently 71 mutation-defined cell lines available for request from a wide range of neurological disorders and this collection will be continually expanded. This represents a significant resource that will advance the use of patient cells as disease models by the scientific community.
doi:10.1371/journal.pone.0043099
PMCID: PMC3428297
PMID: 22952635
Ross, Owen A. | Rutherford, Nicola J. | Baker, Matt | Soto-Ortolaza, Alexandra I. | Carrasquillo, Minerva M. | DeJesus-Hernandez, Mariely | Adamson, Jennifer | Li, Ma | Volkening, Kathryn | Finger, Elizabeth | Seeley, William W. | Hatanpaa, Kimmo J. | Lomen-Hoerth, Catherine | Kertesz, Andrew | Bigio, Eileen H. | Lippa, Carol | Woodruff, Bryan K. | Knopman, David S. | White, Charles L. | Van Gerpen, Jay A. | Meschia, James F. | Mackenzie, Ian R. | Boylan, Kevin | Boeve, Bradley F. | Miller, Bruce L. | Strong, Michael J. | Uitti, Ryan J. | Younkin, Steven G. | Graff-Radford, Neill R. | Petersen, Ronald C. | Wszolek, Zbigniew K. | Dickson, Dennis W. | Rademakers, Rosa
Expanded glutamine repeats of the ataxin-2 (ATXN2) protein cause spinocerebellar ataxia type 2 (SCA2), a rare neurodegenerative disorder. More recent studies have suggested that expanded ATXN2 repeats are a genetic risk factor for amyotrophic lateral sclerosis (ALS) via an RNA-dependent interaction with TDP-43. Given the phenotypic diversity observed in SCA2 patients, we set out to determine the polymorphic nature of the ATXN2 repeat length across a spectrum of neurodegenerative disorders. In this study, we genotyped the ATXN2 repeat in 3919 neurodegenerative disease patients and 4877 healthy controls and performed logistic regression analysis to determine the association of repeat length with the risk of disease. We confirmed the presence of a significantly higher number of expanded ATXN2 repeat carriers in ALS patients compared with healthy controls (OR = 5.57; P= 0.001; repeat length >30 units). Furthermore, we observed significant association of expanded ATXN2 repeats with the development of progressive supranuclear palsy (OR = 5.83; P= 0.004; repeat length >30 units). Although expanded repeat carriers were also identified in frontotemporal lobar degeneration, Alzheimer's and Parkinson's disease patients, these were not significantly more frequent than in controls. Of note, our study identified a number of healthy control individuals who harbor expanded repeat alleles (31–33 units), which suggests caution should be taken when attributing specific disease phenotypes to these repeat lengths. In conclusion, our findings confirm the role of ATXN2 as an important risk factor for ALS and support the hypothesis that expanded ATXN2 repeats may predispose to other neurodegenerative diseases, including progressive supranuclear palsy.
doi:10.1093/hmg/ddr227
PMCID: PMC3140823
PMID: 21610160
Background
A variety of definitions of successful aging have been proposed, many of which relate to longevity, freedom from disease and disability, or preservation of high physical and cognitive function. Many behavioral, biomedical, and psychological factors have been linked with these various measures of successful aging, however genetic predictors are less understood. Parkinson's disease (PD) is an age-related neurodegenerative disorder, and variants in the α-synuclein gene (SNCA) affect susceptibility to PD. This exploratory study examined whether SNCA variants may also promote successful aging as defined by survival without neurological disease.
Methods
We utilized 769 controls without neurological disease (Mean age: 79 years, Range: 33–99 years) and examined the frequency of 20 different SNCA variants across age groups using logistic regression models. We also included 426 PD cases to assess the effect of these variants on PD risk.
Results
There was a significant decline in the proportion of carriers of the minor allele of rs10014396 as age increased (P = 0.021), from 30% in controls younger than 60 to 14% in controls 90 years of age or older. Findings were similar for rs3775439, where the proportion of carriers of the minor allele declined from 32% in controls less than 60 years old to 19% in those 90 or older (P = 0.025). A number of SNCA variants, not including rs10014396 or rs3775439, were significantly associated with susceptibility to PD.
Conclusions
In addition to its documented roles in PD and α-synucleinopathies, our results suggest that SNCA has a role in survival free of neurological disease. Acknowledging that our findings would not have withstood correction for multiple testing, validation in an independent series of aged neurologically normal controls is needed.
doi:10.1371/journal.pone.0042877
PMCID: PMC3418246
PMID: 22912757
Elbaz, Alexis | Ross, Owen A. | Ioannidis, John P.A. | Soto-Ortolaza, Alexandra I | Moisan, Frédéric | Aasly, Jan | Annesi, Grazia | Bozi, Maria | Brighina, Laura | Chartier-Harlin, Marie-Christine | Destée, Alain | Ferrarese, Carlo | Ferraris, Alessandro | Gibson, J. Mark | Gispert, Suzana | Hadjigeorgiou, Georgios M. | Jasinska-Myga, Barbara | Klein, Christine | Krüger, Rejko | Lambert, Jean-Charles | Lohmann, Katja | van de Loo, Simone | Loriot, Marie-Anne | Lynch, Timothy | Mellick, George D. | Mutez, Eugénie | Nilsson, Christer | Opala, Grzegorz | Puschmann, Andreas | Quattrone, Aldo | Sharma, Manu | Silburn, Peter A. | Stefanis, Leonidas | Uitti, Ryan J. | Valente, Enza Maria | Vilariño-Güell, Carles | Wirdefeldt, Karin | Wszolek, Zbigniew K. | Xiromerisiou, Georgia | Maraganore, Demetrius M. | Farrer, Matthew J.
Objective
We studied the independent and joint effects of the genes encoding alpha-synuclein (SNCA) and microtubule associated protein tau (MAPT) in Parkinson's disease (PD) as part of a large meta-analysis of individual data from case-control studies participating in the Genetic Epidemiology of Parkinson's Disease (GEO-PD) consortium.
Methods
Participants of Caucasian ancestry were genotyped for a total of four SNCA (rs2583988, rs181489, rs356219, rs11931074) and two MAPT (rs1052553, rs242557) SNPs. Individual and joint effects of SNCA and MAPT SNPs were investigated using fixed- and random-effects logistic regression models. Interactions were studied both on a multiplicative and an additive scale, and using a case-control and case-only approach.
Results
Fifteen GEO-PD sites contributed a total of 5302 cases and 4161 controls. All four SNCA SNPs and the MAPT H1-haplotype defining SNP (rs1052553) displayed a highly significant marginal association with PD at the significance level adjusted for multiple comparisons. For SNCA, the strongest associations were observed for SNPs located at the 3′ end of the gene. There was no evidence of statistical interaction between any of the four SNCA SNPs and rs1052553 or rs242557, neither on the multiplicative nor on the additive scale.
Interpretation
This study confirms the association between PD and both SNCA SNPs and the H1 MAPT haplotype. It shows, based on a variety of approaches, that the joint action of variants in these two loci is consistent with independent effects of the genes without additional interacting effects.
doi:10.1002/ana.22321
PMCID: PMC3082599
PMID: 21391235
Parkinson disease; SNCA; MAPT; genetics; interaction; case-control
Allen, Mariet | Zou, Fanggeng | Chai, High Seng | Younkin, Curtis S | Miles, Richard | Nair, Asha A | Crook, Julia E | Pankratz, V Shane | Carrasquillo, Minerva M | Rowley, Christopher N | Nguyen, Thuy | Ma, Li | Malphrus, Kimberly G | Bisceglio, Gina | Ortolaza, Alexandra I | Palusak, Ryan | Middha, Sumit | Maharjan, Sooraj | Georgescu, Constantin | Schultz, Debra | Rakhshan, Fariborz | Kolbert, Christopher P | Jen, Jin | Sando, Sigrid B | Aasly, Jan O | Barcikowska, Maria | Uitti, Ryan J | Wszolek, Zbigniew K | Ross, Owen A | Petersen, Ronald C | Graff-Radford, Neill R | Dickson, Dennis W | Younkin, Steven G | Ertekin-Taner, Nilüfer
Background
Glutathione S-transferase omega-1 and 2 genes (GSTO1, GSTO2), residing within an Alzheimer and Parkinson disease (AD and PD) linkage region, have diverse functions including mitigation of oxidative stress and may underlie the pathophysiology of both diseases. GSTO polymorphisms were previously reported to associate with risk and age-at-onset of these diseases, although inconsistent follow-up study designs make interpretation of results difficult. We assessed two previously reported SNPs, GSTO1 rs4925 and GSTO2 rs156697, in AD (3,493 ADs vs. 4,617 controls) and PD (678 PDs vs. 712 controls) for association with disease risk (case-controls), age-at-diagnosis (cases) and brain gene expression levels (autopsied subjects).
Results
We found that rs156697 minor allele associates with significantly increased risk (odds ratio = 1.14, p = 0.038) in the older ADs with age-at-diagnosis > 80 years. The minor allele of GSTO1 rs4925 associates with decreased risk in familial PD (odds ratio = 0.78, p = 0.034). There was no other association with disease risk or age-at-diagnosis. The minor alleles of both GSTO SNPs associate with lower brain levels of GSTO2 (p = 4.7 × 10-11-1.9 × 10-27), but not GSTO1. Pathway analysis of significant genes in our brain expression GWAS, identified significant enrichment for glutathione metabolism genes (p = 0.003).
Conclusion
These results suggest that GSTO locus variants may lower brain GSTO2 levels and consequently confer AD risk in older age. Other glutathione metabolism genes should be assessed for their effects on AD and other chronic, neurologic diseases.
doi:10.1186/1750-1326-7-13
PMCID: PMC3393625
PMID: 22494505
GSTO genes; Disease risk; Gene expression; Association
Vilariño-Güell, Carles | Ross, Owen A. | Wider, Christian | Jasinska-Myga, Barbara | Cobb, Stephanie A. | Soto-Ortolaza, Alexandra I. | Kachergus, Jennifer M. | Keeling, Brett H. | Dachsel, Justus C. | Melrose, Heather L. | Behrouz, Bahareh | Wszolek, Zbigniew K. | Uitti, Ryan J. | Aasly, Jan O | Rajput, Alex | Farrer, Matthew J.
Recently, a variant in LINGO1 (rs9652490) was found to associate with increased risk of essential tremor. We set out to replicate this association in an independent case-control series of essential tremor from North America. In addition, given the clinical and pathological overlap between essential tremor and Parkinson disease, we also evaluate the effect of LINGO1 rs9652490 in two case-control series of Parkinson disease. Our study demonstrates a significant association between LINGO1 rs9652490 and essential tremor (P=0.014) and Parkinson disease (P=0.0003), thus providing the first evidence of a genetic link between both diseases.
doi:10.1016/j.parkreldis.2009.08.006
PMCID: PMC2844122
PMID: 19720553
LINGO1; Parkinson disease; essential tremor
Wider, Christian | Dachsel, Justus C. | Soto, Alexandra I. | Heckman, Michael G. | Diehl, Nancy N. | Yue, Mei | Lincoln, Sarah | Aasly, Jan O. | Haugarvoll, Kristoffer | Trojanowski, John Q. | Papapetropoulos, Spiridon | Mash, Deborah | Rajput, Alex | Rajput, Ali H. | Gibson, J. Mark | Lynch, Timothy | Dickson, Dennis W. | Uitti, Ryan J. | Wszolek, Zbigniew K. | Farrer, Matthew J. | Ross, Owen A.
Genetic variation in fibroblast growth factor 20 (FGF20) has been associated with risk of Parkinson's disease (PD). Functional evidence suggested the T allele of one SNP, rs12720208 C/T, altered PD risk by increasing FGF20 and α-synuclein protein levels. Herein we report our association study of FGF20 and PD risk in four patient-control series (total: 1,262 patients and 1,881 controls), and measurements of FGF20 and α-synuclein protein levels in brain samples (nine patients). We found no evidence of association between FGF20 variability and PD risk, and no relationship between the rs12720208 genotype, FGF20 and α-synuclein protein levels.
doi:10.1002/mds.22442
PMCID: PMC2875476
PMID: 19133659
Parkinson's disease; FGF20; α-synuclein; association study; genetics
Xiao, Jianfeng | Bastian, Robert W | Perlmutter, Joel S | Racette, Brad A | Tabbal, Samer D | Karimi, Morvarid | Paniello, Randal C | Blitzer, Andrew | Batish, Sat Dev | Wszolek, Zbigniew K | Uitti, Ryan J | Hedera, Peter | Simon, David K | Tarsy, Daniel | Truong, Daniel D | Frei, Karen P | Pfeiffer, Ronald F | Gong, Suzhen | Zhao, Yu | LeDoux, Mark S
Background
Although the c.904_906delGAG mutation in Exon 5 of TOR1A typically manifests as early-onset generalized dystonia, DYT1 dystonia is genetically and clinically heterogeneous. Recently, another Exon 5 mutation (c.863G>A) has been associated with early-onset generalized dystonia and some ΔGAG mutation carriers present with late-onset focal dystonia. The aim of this study was to identify TOR1A Exon 5 mutations in a large cohort of subjects with mainly non-generalized primary dystonia.
Methods
High resolution melting (HRM) was used to examine the entire TOR1A Exon 5 coding sequence in 1014 subjects with primary dystonia (422 spasmodic dysphonia, 285 cervical dystonia, 67 blepharospasm, 41 writer's cramp, 16 oromandibular dystonia, 38 other primary focal dystonia, 112 segmental dystonia, 16 multifocal dystonia, and 17 generalized dystonia) and 250 controls (150 neurologically normal and 100 with other movement disorders). Diagnostic sensitivity and specificity were evaluated in an additional 8 subjects with known ΔGAG DYT1 dystonia and 88 subjects with ΔGAG-negative dystonia.
Results
HRM of TOR1A Exon 5 showed high (100%) diagnostic sensitivity and specificity. HRM was rapid and economical. HRM reliably differentiated the TOR1A ΔGAG and c.863G>A mutations. Melting curves were normal in 250/250 controls and 1012/1014 subjects with primary dystonia. The two subjects with shifted melting curves were found to harbor the classic ΔGAG deletion: 1) a non-Jewish Caucasian female with childhood-onset multifocal dystonia and 2) an Ashkenazi Jewish female with adolescent-onset spasmodic dysphonia.
Conclusion
First, HRM is an inexpensive, diagnostically sensitive and specific, high-throughput method for mutation discovery. Second, Exon 5 mutations in TOR1A are rarely associated with non-generalized primary dystonia.
doi:10.1186/1471-2350-10-24
PMCID: PMC2661056
PMID: 19284587
Rademakers, Rosa | Eriksen, Jason L. | Baker, Matt | Robinson, Todd | Ahmed, Zeshan | Lincoln, Sarah J. | Finch, Nicole | Rutherford, Nicola J. | Crook, Richard J. | Josephs, Keith A. | Boeve, Bradley F. | Knopman, David S. | Petersen, Ronald C. | Parisi, Joseph E. | Caselli, Richard J. | Wszolek, Zbigniew K. | Uitti, Ryan J. | Feldman, Howard | Hutton, Michael L. | Mackenzie, Ian R. | Graff-Radford, Neill R. | Dickson, Dennis W.
Loss-of-function mutations in progranulin (GRN) cause ubiquitin- and TAR DNA-binding protein 43 (TDP-43)-positive frontotemporal dementia (FTLD-U), a progressive neurodegenerative disease affecting ∼10% of early-onset dementia patients. Here we expand the role of GRN in FTLD-U and demonstrate that a common genetic variant (rs5848), located in the 3′-untranslated region (UTR) of GRN in a binding-site for miR-659, is a major susceptibility factor for FTLD-U. In a series of pathologically confirmed FTLD-U patients without GRN mutations, we show that carriers homozygous for the T-allele of rs5848 have a 3.2-fold increased risk to develop FTLD-U compared with homozygous C-allele carriers (95% CI: 1.50–6.73). We further demonstrate that miR-659 can regulate GRN expression in vitro, with miR-659 binding more efficiently to the high risk T-allele of rs5848 resulting in augmented translational inhibition of GRN. A significant reduction in GRN protein was observed in homozygous T-allele carriers in vivo, through biochemical and immunohistochemical methods, mimicking the effect of heterozygous loss-of-function GRN mutations. In support of these findings, the neuropathology of homozygous rs5848 T-allele carriers frequently resembled the pathological FTLD-U subtype of GRN mutation carriers. We suggest that the expression of GRN is regulated by miRNAs and that common genetic variability in a miRNA binding-site can significantly increase the risk for FTLD-U. Translational regulation by miRNAs may represent a common mechanism underlying complex neurodegenerative disorders.
doi:10.1093/hmg/ddn257
PMCID: PMC2581433
PMID: 18723524