PMCC PMCC

Search tips
Search criteria

Advanced
Results 1-25 (411943)

Clipboard (0)
None

Related Articles

1.  Applied Biotechnology in Nematology 
Journal of Nematology  1993;25(4S):719-730.
During the past two decades, rapid advances in biotechnology and molecular biology have affected the understanding and treatment of human and plant diseases. The human and Caenorhabditis elegans genome-sequencing projects promise further techniques and results useful to applied nematology. Of course, biotechnology is not a panacea for nematological problems, but it provides many powerful tools that have potential use in applied biology and nematode management. The tools will facilitate research on a range of previously intractable problems in nematology, from identification of species and pathotypes to the development of resistant cultivars that have been inaccessible because of technical limitations. However, to those unfamiliar or not directly involved with the new technologies and their extensive terminology, the benefits of the advances in biotechnology may not be readily discerned. The sustainable agriculture of the future will require ecology-based management, and successful integrated nematode management will depend on combinations of control tactics to reduce nematode numbers. In this review we discuss how biotechnology may influence nematode management, define terminology relative to potential applications, and present current and future avenues of research in applied nematology, including species identification, race and pathotype identification, development of resistant cultivars, definition of nematode-host interactions, nematode population dynamics, establishment of optimal rotations, the ecology of biological control and development of useful biological control agents, and the design of novel nematicides.
PMCID: PMC2619462  PMID: 19279831
agriculture; applied biotechnology; biological control; biotechnology; identification; management; molecular biology; nematode
2.  Trend towards multiple authorship in occupational medicine journals 
Background
There is an established trend towards an increasing number of authors per article in prestigious journals for medicine and health sciences. It is uncertain whether a similar trend occurs to the same extent in journals for specific medical specialties.
Methods
Journals focusing on occupational medicine were selected for analysis with regard to single or multiple-authorship per peer-reviewed paper. Data were collected from PubMed for publications between 1970 and 2007. These were analysed to calculate the average number of authors per multiple-author article per year and the percentage of single-author articles per year. The slope and average of these journals were then compared with that of previously studied non-occupational medicine journals.
Results
The results confirm a trend towards a linear increase in the average number of authors per article and a linear decrease in the percentage of single-author articles. The slope for the average number of authors for multiple-author articles was significantly higher in the Journal of Occupational and Environmental Medicine than in the other occupational medicine journals. Computational analysis of all articles published showed that Occupational Medicine (Oxford) had a significantly higher percentage of single-author articles than the other occupational medicine journals as well as major journals previously studied.
Conclusion
The same trend towards multiple authorship can be observed in medical specialty journals as in major journals for medicine and health sciences. There is a direct relationship between occupational journals with higher impact factors and a higher average number of authors per article in those journals.
doi:10.1186/1745-6673-4-3
PMCID: PMC2645424  PMID: 19203357
3.  Plant and Soil Nematodes: Societal Impact and Focus for the Future. 
Journal of Nematology  1994;26(2):127-137.
Plant and soil nematodes significandy impact our lives. Therefore, we must understand and manage these complex organisms so that we may continue to develop and sustain our food production systems, our natural resources, our environment, and our quality of life. This publication looks specifically at soil and plant nematology. First, the societal impact of nematodes and benefits of nematology research are briefly presented. Next, the opportunities facing nematology in the next decade are outlined, as well as the resources needed to address these priorities. The safety and sustainability of U.S. food and fiber production depends on public and administrative understanding of the importance of nematodes, the drastic effects of nematodes on many agricultural and horticultural crops, and the current research priorities of nematology.
PMCID: PMC2619488  PMID: 19279875
alternative management tactics; behavior; benefit to society; beneficial nematodes; biochemistry; biological control; constraints in nematology; control; crop rotation; cultural practice; ecology; education; environment; extension; diagnostics; funding; genetics; host-parasite interaction; information transfer; molecular genetics; nematicide; nematode; nematology; nematode management; nutrient cycling; pesticide; plant parasites; research goals; research priorities; resistance; resource; science of nematology; society; spread; sustainable agriculture; systematics
4.  What Every Author and Reviewer Should Know about the Publication Process in the Journal of Nematology 
Journal of Nematology  1997;29(4S):619-624.
The Journal of Nematology is a publication of the very highest quality for communicating the most recent discoveries in the science of nematology. The authors of this Viewpoint article desire to maintain the status of the journal while lessening the burden placed on the editorial staff. A few simple steps taken by authors during the manuscript preparation phase can greatly improve the quality of their papers. Authors should carefully review the "Author's Publication Handbook and Style Manual" before and during the preparation of a manuscript intended for publication in the Journal of Nematology. In addition, authors should submit a completed "Author's Checklist for Preparation of Papers" with each manuscript submitted to the journal. Reviewers should provide thorough reviews, return mantlscripts in a timely manner, and clearly define statements regarding revisions.
PMCID: PMC2619833  PMID: 19274261
editor; manuscript; publication; reviewer; style manual
5.  Trends in health sciences library and information science research: an analysis of research publications in the Bulletin of the Medical Library Association and Journal of the Medical Library Association from 1991 to 2007* 
Objective:
This study analyzed trends in research activity as represented in the published research in the leading peer-reviewed professional journal for health sciences librarianship.
Methodology:
Research articles were identified from the Bulletin of the Medical Library Association and Journal of the Medical Library Association (1991–2007). Using content analysis and bibliometric techniques, data were collected for each article on the (1) subject, (2) research method, (3) analytical technique used, (4) number of authors, (5) number of citations, (6) first author affiliation, and (7) funding source. The results were compared to a previous study, covering the period 1966 to 1990, to identify changes over time.
Results:
Of the 930 articles examined, 474 (51%) were identified as research articles. Survey (n = 174, 37.1%) was the most common methodology employed, quantitative descriptive statistics (n = 298, 63.5%) the most used analytical technique, and applied topics (n = 332, 70%) the most common type of subject studied. The majority of first authors were associated with an academic health sciences library (n = 264, 55.7%). Only 27.4% (n = 130) of studies identified a funding source.
Conclusion:
This study's findings demonstrate that progress is being made in health sciences librarianship research. There is, however, room for improvement in terms of research methodologies used, proportion of applied versus theoretical research, and elimination of barriers to conducting research for practicing librarians.
doi:10.3163/1536-5050.97.3.009
PMCID: PMC2706445  PMID: 19626146
6.  A White Paper on Nematode Comparative Genomics 
Journal of Nematology  2005;37(4):408-416.
In response to the new opportunities for genome sequencing and comparative genomics, the Society of Nematology (SON) formed a committee to develop a white paper in support of the broad scientific needs associated with this phylum and interests of SON members. Although genome sequencing is expensive, the data generated are unique in biological systems in that genomes have the potential to be complete (every base of the genome can be accounted for), accurate (the data are digital and not subject to stochastic variation), and permanent (once obtained, the genome of a species does not need to be experimentally re-sampled). The availability of complete, accurate, and permanent genome sequences from diverse nematode species will underpin future studies into the biology and evolution of this phylum and the ecological associations (particularly parasitic) nematodes have with other organisms. We anticipate that upwards of 100 nematode genomes will be solved to varying levels of completion in the coming decade and suggest biological and practical considerations to guide the selection of the most informative taxa for sequencing.
PMCID: PMC2620993  PMID: 19262884
Caenorhabditis elegans; comparative genomics; genome sequencing; systematics
7.  The Prevalence of Honorary and Ghost Authorships in Iranian Bio-Medical Journals and Its Associated Factors 
Background:
The purpose of this study was to detect the prevalence of ghost and honorary authors and its determinant factors in bio-medical journals of Iran.
Methods:
The study was done in 2009–10 in Tehran, Kerman, and Iran Medical Universities, Iran. We contacted the first or corresponding authors of the papers had published papers in the recent two issues of Iranian Journal of Public Health, Journal of Kerman University of Medical Sciences, and Tehran University Medical Journal. They explored the role of each coauthor and others who had done mouthing for the paper. Then, according to ICMJE criteria, we counted how many of them are real, honorary or ghost author. For the analysis, we utilized two databases. One included articles as the records and the other included authors as the records.
Results:
From 124 articles, with 536 authors, 301 (56.1%) were honorary authors. Each article had 4.35 authors on average, while 2.4 of them were honorary authors. The percentage of honorary author in basic science articles was about 6% more than the articles of clinical sciences. Moreover, 89% of articles had at least one honorary author. About 20% of all articles had more than three honorary authors. Besides, 25 (21.43%) authors confessed they had colleague(s) omitted from the authors list, while only one (0.81%) of them met the authorship criteria. The percentage of agreement between the corresponding and the remaining authors on the number of honorary of the authors was about 47.4% (Kappa= 0.27, P= 0.01).
Conclusion:
It seems that the present data might assist the authorities to make a decisive decision on amending the process of authorship in Iran.
PMCID: PMC3481730  PMID: 23113050
Journal; Paper; Honorary author; Ghost author; Iran
8.  Measuring Co-Authorship and Networking-Adjusted Scientific Impact 
PLoS ONE  2008;3(7):e2778.
Appraisal of the scientific impact of researchers, teams and institutions with productivity and citation metrics has major repercussions. Funding and promotion of individuals and survival of teams and institutions depend on publications and citations. In this competitive environment, the number of authors per paper is increasing and apparently some co-authors don't satisfy authorship criteria. Listing of individual contributions is still sporadic and also open to manipulation. Metrics are needed to measure the networking intensity for a single scientist or group of scientists accounting for patterns of co-authorship. Here, I define I1 for a single scientist as the number of authors who appear in at least I1 papers of the specific scientist. For a group of scientists or institution, In is defined as the number of authors who appear in at least In papers that bear the affiliation of the group or institution. I1 depends on the number of papers authored Np. The power exponent R of the relationship between I1 and Np categorizes scientists as solitary (R>2.5), nuclear (R = 2.25–2.5), networked (R = 2–2.25), extensively networked (R = 1.75–2) or collaborators (R<1.75). R may be used to adjust for co-authorship networking the citation impact of a scientist. In similarly provides a simple measure of the effective networking size to adjust the citation impact of groups or institutions. Empirical data are provided for single scientists and institutions for the proposed metrics. Cautious adoption of adjustments for co-authorship and networking in scientific appraisals may offer incentives for more accountable co-authorship behaviour in published articles.
doi:10.1371/journal.pone.0002778
PMCID: PMC2464713  PMID: 18648663
9.  The gender imbalance in academic medicine: a study of female authorship in the United Kingdom 
Summary
Objectives
A shortfall exists of female doctors in senior academic posts in the United Kingdom. Career progression depends on measures of esteem, including publication in prestigious journals. This study investigates gender differences in first and senior authorship in six peer-reviewed British journals and factors that are associated with publication rates.
Design and main outcome measures
Data was collected on United Kingdom first and senior authors who had published in the British Medical Journal, Lancet, British Journal of Surgery, Gut, British Journal of Obstetrics and Gynaecology and the Archives of Diseases in Childhood. Authorship and gender were quantified for 1970, 1980, 1990, 2000 and 2004 (n=6457). In addition, selected questions from the Athena Survey of Science Engineering and Technology (ASSET2006), web-based doctor's self-report of publications were also analysed (n=1162).
Results
Female first authors increased from 10.5% in 1970 to 36.5% in 2004 (p<0.001) while female senior authors only increased from 12.3% to 16.5% (p=0.046). Within individual journals, the largest rise was in British Journal of Obstetric and Gynaecology with 4.5- and 3-fold increases for first and senior authors, respectively. In contrast, female senior authors marginally declined in Gut and Lancet by 2.8% and 2.2%, respectively. ASSET2006 identified that female respondents who were parents were less likely to have publications as sole (p=0.02) and joint authors (p<0.001) compared to male respondents. Female respondents with care responsibilities for parents/partner also had less publications as lead authors compared to those without carer responsibilities (p<0.001).
Conclusion
The increase in UK female first authors is encouraging. In contrast, there is considerable lag and in some specialties a decline in female senior authors. Factors that could narrow the gender gap in authorship should be sought and addressed.
doi:10.1258/jrsm.2009.080378
PMCID: PMC2726808  PMID: 19679736
10.  Applications of Geostatistics in Plant Nematology 
Journal of Nematology  1994;26(4S):626-634.
The application of geostatistics to plant nematology was made by evaluating soil and nematode data acquired from 200 soil samples collected from the Ap horizon of a reed canary-grass field in northern Minnesota. Geostatistical concepts relevant to nematology include semi-variogram modelling, kriging, and change of support calculations. Soil and nematode data generally followed a spherical semi-variogram model, with little random variability associated with soil data and large inherent variability for nematode data. Block kriging of soil and nematode data provided useful contour maps of the data. Change of snpport calculations indicated that most of the random variation in nematode data was due to short-range spatial variability in the nematode population densities.
PMCID: PMC2619571  PMID: 19279938
change of support; contour mapping; geostatistics; kriging; nematode; plant-parasitic nematode; semi-variogram
11.  Biocontrol: The Potential of Entomophilic Nematodes in Insect Management 
Journal of Nematology  1980;12(4):270-278.
A review of the development of entomophilic nematology and a commentary on the potential of entomophilic nematodes in controlling insect pests. The paper considers some of the major contributions to our knowledge of entomophilic nematology; factors involved in insect pest management and how they are applicable to the use of nematodes; nematodes which are most promising as biological control agents; and problems to be solved to facilitate the use of entomophilic nematodes in insect management.
PMCID: PMC2618036  PMID: 19300702
Mermis nigrescens; Neoaplectana spp.; Romanomermis culicivorax; Deladenus siricidicola; Tetradonema plicans
12.  A Position Paper on the Electronic Publication of Nematode Taxonomic Manuscripts 
Journal of Nematology  2006;38(3):305-311.
Several nematode species have now attained ‘model organism’ status, yet there remain many niches in basic biological inquiry for which nematodes would be ideal model systems of study. However, furthering the model system approach is hindered by lack of information on nematode biodiversity. The shortage of taxonomic resources to inventory and characterize biodiversity hinders research programs in invasion biology, ecosystem functioning, conservation biology, and many others. The disproportion between numbers of species to be described and numbers of available taxonomic specialists is greater for Nematoda than for any other metazoan phylum. A partial solution to the taxonomic impediment is the adoption of recent advances in electronic publishing. Electronic publishing has the potential to increase the rate at which taxonomic papers are published, the breadth of their distribution, and the type, quantity, quality, and accessibility of data. We propose that the Journal of Nematology implement the advantageous aspects of electronic publication as a means to help ameliorate the limitations of an underdeveloped taxonomy and empower the nematological disciplines currently hindered by it.
PMCID: PMC2586701  PMID: 19259533
data integration; digital multifocal images; electronic publication; nematode taxonomy; online descriptions; position paper
13.  Recent trends in publication of basic science and clinical research by United States investigators in anesthesia journals 
BMC Anesthesiology  2012;12:5.
Background
United States anesthesia research production declined sharply from 1980-2005. Whether this trend has continued despite recent calls to improve output is unknown. We conducted an observational internet analysis to quantify American basic science and clinical anesthesia research output in 14 anesthesia journals with impact factors greater than one at three-year intervals during the past decade.
Results
American investigators published 1,486 (21.7%) of the total of 6,845 research articles identified in anesthesia journals in 2001, 2004, 2007, and 2010. Approximately two-thirds of all US articles were published in Anesthesiology and Anesthesia and Analgesia. There was a significant correlation (r2 = 0.316; P = 0.036) between the number of articles published by American authors in each anesthesia journal and the corresponding journal's impact factor in 2010. Significantly (P < 0.05; Pearson's Chi-square) fewer basic science articles were published in 2007 and 2010 compared with 2001. US clinical research output also declined in 2007 (201; 15.7%) compared with 2001 (266; 19.1%) and 2004, but an increase occurred in 2010 (279; 21.8%, P < 0.05 versus 2007).
Conclusions
The results indicate that US anesthesia research output continued to decrease from 2001 to 2007. An increase in clinical but not basic science research was observed in 2010 compared with 2007, suggesting that a modest recovery in clinical research production may have begun.
doi:10.1186/1471-2253-12-5
PMCID: PMC3337323  PMID: 22439884
Anesthesia journals; Bibliometrics; Research; Scholarship; Scientific publication
14.  Current status and trend of the publication to the SCI and SCIE journals in the field of radiation oncology in Korea for 30 years 
Radiation Oncology Journal  2012;30(1):14-19.
Purpose
We collected the data of Science Citation Index (SCI) and SCI Expended (SCIE) papers written by the members of the Korean Society of Radiation Oncology (KOSRO) to analyze the current status and the future trend.
Materials and Methods
We searched the database of SCIE for the period from 1981 to 2011 at the Web of Knowledge site. Articles, reviews or proceedings written by KOSRO members as the first or corresponding authors were included. Search terms were the following combination of subject headings: therapeut radiol, radiat oncol, Korea. For National Cancer Center, combined search terms such as natl canc ctr, Korea and the names of faculties were applied.
Results
The total number of SCIE papers was 547. Numbers of the published papers in 1995, 2000, 2005, and 2010, were increased continuously, which was 2, 14, 40, and 83, respectively. The average impact factor was 2.9. The papers were published at the 134 different journals. The proportion of "International Journal of Radiation Oncology Biology Physics" was 23.4% of all the papers. The number and proportions of papers by subject categories were 87 (15.9%) in biology, 73 (13.3%) in physics and 387 (70.6%) in clinics. The papers of the top five institutions, based on the number of published papers, occupied 66.3%.
Conclusion
The number of SCIE papers is increasing rapidly in the field of radiation oncology in Korea. To improve the quality of papers, multi-institutional retrospective or prospective randomized studies should be done for the common cancers in Korea.
doi:10.3857/roj.2012.30.1.14
PMCID: PMC3475958  PMID: 23120739
Science Citation Index; Korean Society of Radiation Oncology; Web of Knowledge
15.  Effect of Controlled Cold Storage on Recovery of Rotylenchulus reniformis from Naturally Infested Soil 
Journal of Nematology  2005;37(3):272-275.
Rotylenchulus reniformis is rapidly becoming the most economically important pest associated with cotton in the southeastern United States. Incentive programs have been implemented to support sampling of production fields to determine the presence and abundance of R. reniformis. These sampling programs have dramatically increased the number of soils samples submitted to nematology laboratories during autumn. The large numbers of samples overwhelm most labs and require placement in cold storage until extraction. Therefore, the objective of this study was to examine the length of time soils infested with R. reniformis can be stored before nematode extraction without compromising the accuracy of estimates of population densities. A sandy loam and a silty loam were the two cotton production soils used in this study. Rotylenchulus reniformis numbers decreased 61%during the first 180 days of storage in both soils. Rotylenchulus reniformis numbers from the initial sampling through 180 days decreased as a linear function. The decline of R. reniformis numbers during storage was estimated as 0.28% of the population lost daily from the maximum population through 180 days. The diminution of nematode numbers from 180 through 1,080 days in storage continued, but at a slower rate. Numbers of R. reniformis declined to less than 89%, 93%, and 99% of the initial population within 360, 720, and 1,080 days, respectively, of storage. The reduction of R. reniformis numbers over 180 days can be adjusted, allowing a more accurate estimation of R. reniformis levels in soil samples stored at 4 °C.
PMCID: PMC2620982  PMID: 19262872
Rotylenchulus reniformis; soil storage; population density
16.  Characteristics and Trends of Orthopedic Publications between 2000 and 2009 
Clinics in Orthopedic Surgery  2011;3(3):225-229.
Background
This study was undertaken to investigate the trends of orthopedic publications during the last decade, and to document the country of origin, journal, funding source, and language of contribution using PubMed.
Methods
Orthopedic articles published between 2000 and 2009 were retrieved from PubMed using the following search terms: "orthopaedic[Affiliation] AND ("2000/1/1"[PDAT]: "2009/12/31"[PDAT])" and "orthopedic[Affiliation] AND ("2000/1/1"[PDAT]: "2009/12/31"[PDAT])." The articles were downloaded in XML file format, which contained the following information: article title, author names, journal names, publication dates, article types, languages, authors' affiliations and funding sources. These information was extracted, sorted, and rearranged using the database's management software. We investigated the annual number of published orthopedic articles worldwide and the annual rate of increase. Furthermore, the country of publication origin, journal, funding source, and language of contribution were also investigated.
Results
A total of 46,322 orthopedic articles were published and registered in PubMed in the last 10 years. The worldwide number of published orthopedic articles increased from 2,889 in 2000 to 6,909 in 2009, showing an annual increase of 384.6 articles, or an annualized compound rate of 10.2%. The United States ranked highest in the number of published orthopedic articles, followed by Japan, the United Kingdom, Germany, and the Republic of Korea. Among the orthopedic articles published worldwide during the last 10 years, 37.9% pertained studies performed in the United States. Fifty-seven point three percent (57.3%) of articles were published in journals established in the United States. Among the published orthopaedic articles, 4,747 articles (10.2%) disclosed financial support by research funds, of which 4,688 (98.8%) articles utilized research funds from the United States. Most articles were published in English (97.2%, 45,030 articles).
Conclusions
The number of published orthopedic articles has been increasing over the last decade. The number of orthopedic articles, journals publication, and funding sources were dominated by research conducted in the United States, while share and growth of Asian countries including Japan, the Republic of Korea, and China were notable.
doi:10.4055/cios.2011.3.3.225
PMCID: PMC3162203  PMID: 21909470
Bibliometrics; Orthopedics; Research trend; Periodicals as topics
17.  Longitudinal Evaluation of Journal of Athletic Training Author Credentials: Implications for Future Research Engagement in Athletic Training 
Journal of Athletic Training  2009;44(4):427-433.
Purpose:
To employ retrospective trend analysis in an attempt to provide a layered description of the relative contribution (per credential) of clinical athletic trainers (those without terminal degrees) to authoring scientific literature in the Journal of Athletic Training (JAT). From these data, our secondary purpose was to evaluate trends relative to changes in journal policy and increased educational rigor or professional limitations over the past decade, discussing how they may affect the potential for clinical athletic trainers to contribute to JAT.
Design:
Exploratory study design with trend analysis.
Participants:
Data collection and analysis included a trend evaluation of the credentials of clinical athletic trainer authors in JAT and the teams (by credential) of authorship to determine the credentials of authors who published in JAT.
Measurements:
Longitudinal tabulation of JAT author credentials from 1995 through 2007.
Results:
We noted increases in the absolute number of research articles per volume and the number of authors per article and a decrease in the relative percentage of authors who were athletic trainers. The results also suggested that the bachelor of science degree (BS-ATC, representative of clinical athletic trainers without advanced degrees) and Doctor of Medicine (MD) credential may be underrepresented in JAT authorship.
Conclusions:
Postgraduate research training may facilitate scientific article contribution by athletic trainers. Continued evolution in the athletic training evidence-based medicine movement should foster research-based mentorship during education. Cultivating collaborations between clinical athletic trainers and research teams may also promote outcomes assessment trials, which will benefit athletic training practices.
PMCID: PMC2707066  PMID: 19593426
research engagement educational models; evidence-based medicine; athletic training research mentorship; athletic training research investigation; author analysis; publication analysis
18.  Innovative Multimedia for Teaching Nematology 
Journal of Nematology  1993;25(3):367-373.
The availability of interactive multimedia authoring software programs promises to revolutionize the teaching of nematology. These programs integrate text, hypertext, graphics, animations, video, and sound. The user interacts with the information on demand in a nonlinear fashion. Beginning students can limit themselves to the general outlines of the subject, and advanced students can explore the information to the limits of their ability. Use of interactive multimedia does not eliminate the need for effective, enthusiastic teachers but provides a mechanism for the efficient transfer of information. An interactive multimedia presentation that supplements lectures in an introductory course is presented as an example of the application of this technology for teaching nematology.
PMCID: PMC2619398  PMID: 19279782
authoring program; computer; instruction; multimedia; nematology; teaching
19.  “Equal” Contributions and Credit: An Emerging Trend in the Characterization of Authorship 
Annals of epidemiology  2010;20(11):868-871.
Background
Scientific manuscripts sometimes have two or more authors explicitly designated as having “contributed equally” to the study. The prevalence and characteristics of this practice are not known. The goal of this study was to identify longitudinal trends and characteristics of the practice of explicitly giving authors equal credit in publications found in major medical journals.
Methods
We conducted electronic keyword searches looking for original research articles with equally credited authors (ECAs) published between January 1, 2000 and December 31, 2009 in the five general medicine journals with the highest impact factors (New England Journal of Medicine, Journal of the American Medical Association, Lancet, Annals of Internal Medicine, and British Medical Journal). The annual prevalence of original research articles with ECAs for each journal.
Results
Original research articles with authors explicitly given equal credit were found in all five journals. Articles with ECAs formed a greater proportion of the total number of articles published in each journal in 2009 versus published in 2000. [NEJM: 8.6% vs. <1%; JAMA: 7.5% vs. 0%; Annals: 3.8% vs. 0%; Lancet: 3.6% vs. <1%; BMJ: 1.0% vs. 0%]. There was a statistically significant increasing trend in yearly prevalence of ECA articles for all the journals [NEJM: p<0.0001; JAMA: p<0.001; Annals: p<0.001; Lancet: p<0.001, BMJ: p=0.001]. The first two authors listed in the byline received equal credit the majority of the time but the practice was also applied to authors in nearly every position in the byline. Finally, none of the journals provided specific guidance regarding this practice in their instructions to authors.
Conclusions
The practice of explicitly giving authors equal credit is increasingly common in original research publications. Scientific journals should consider providing guidance for authors regarding this practice. Furthermore, the potential impact of this practice on evaluations for academic promotion should be assessed.
doi:10.1016/j.annepidem.2010.08.004
PMCID: PMC2953548  PMID: 20933195
authorship; credit; equal; contributions; practice
20.  International publication trends of JABA authorship. 
The present study addressed international publication trends in JABA authorship between 1970 and 1999. First, we analyzed authorship patterns to identify trends in the appearance of new first authors, unfamiliar authors, and frequent contributors. Second, articles were assigned to either a North American or an international category. The data show a decline in the number of articles by new authors and an increase in the publications of frequent contributors from North America. Trends are shown in comparison to those from the American Journal on Mental Retardation.
doi:10.1901/jaba.2000.33-339
PMCID: PMC1284259  PMID: 11051578
21.  Co-authorship patterns and networks of Korean radiation oncologists 
Radiation Oncology Journal  2011;29(3):164-173.
Purpose
This research aimed to analyze the patterns of co-authorship network among the Korean radiation oncologists and to identify attributing factors for the formation of networks.
Materials and Methods
A total of 1,447 articles including contents of 'Radiation Oncology' and 'Therapeutic Radiology' were searched from the KoreaMed database. The co-authorship was assorted by the author's full name, affiliation and specialties. UCINET 6.0 was used to figure out the author's network centrality and the cluster analysis, and KeyPlayer 1.44 program was used to get a result of key player index. Sociogram was analyzed with the Netdraw 2.090. The statistical comparison was performed by a t-test and ANOVA using SPSS 16.0 with p-value < 0.05 as the significant value.
Results
The number of articles written by a radiation oncologist as the first author was 1,025 out of 1,447. The pattern of co-authorship was classified into five groups. For articles of which the first author was a radiation oncologist, the number of single-author articles (type-A) was 81; single-institution articles (type-B) was 687; and multiple-author articles (type-C) was 257. For the articles which radiation oncologists participated in as a co-author, the number of single-institution articles (type-D) was 280 while multiple-institution articles (type-E) were 142. There were 8,895 authors from 1,366 co-authored articles, thus the average number of authors per article was 6.51. It was 5.73 for type-B, 6.44 for type-C, 7.90 for type-D, and 7.67 for type-E (p = 0.000) in the average number of authors per article. The number of authors for articles from the hospitals published more than 100 articles was 7.23 while form others was 5.94 (p = 0.005). Its number was 5.94 and 7.16 for the articles published before and after 2001 (p = 0.000). The articles written by a radiation oncologist as the first author had 5.92 authors while others for 7.82 (p = 0.025). Its number was 5.57 and 7.71 for the Journal of the Korean Society for Therapeutic Radiology and Oncology and others (p = 0.000), respectively. Among the analysis, a significant difference in the average number of author per article was indicated. The out-degree centrality of network among authors was 4.26% (2.03.7.09%) while in-degree centrality was 1.31% (0.53.2.84%). The three significant nodes were classified and listed as following: Choi, Eun Kyung for 1991-1995, Kim, Dae Young for 1998-2001, Park, Won and Lee, Sang Wook for 2003-2010. Choi, Eun Kyung and Kim, Dae Young appeared in two cases, and ranked as the highest degree in centrality. In the key player analysis, Choi, Eun Kyung and Lee, Sang Wook appeared in two cases, and ranked as the highest. From the cluster analysis, Sungkyunkwan University, Seoul National University and Yonsei University revealed as the three large clusters when Ulsan University, Chonnam National University, and Korea Institute of Radiological & Medical Science as the medium clusters.
Conclusion
The Korean radiation oncologist's society shows a closed network with numerous relationships among the particular clusters, and the result indicates it is different from other institutions in the pattern of co-authorship formation of the major hospitals.
doi:10.3857/roj.2011.29.3.164
PMCID: PMC3429899  PMID: 22984667
Radiation Oncology; Co-authorship; Network
22.  The Matthew effect in environmental science publication: A bibliometric analysis of chemical substances in journal articles 
Environmental Health  2011;10:96.
Background
While environmental research addresses scientific questions of possible societal relevance, it is unclear to what degree research focuses on environmental chemicals in need of documentation for risk assessment purposes.
Methods
In a bibliometric analysis, we used SciFinder to extract Chemical Abstract Service (CAS) numbers for chemicals addressed by publications in the 78 major environmental science journals during 2000-2009. The Web of Science was used to conduct title searches to determine long-term trends for prominent substances and substances considered in need of research attention.
Results
The 119,636 journal articles found had 760,056 CAS number links during 2000-2009. The top-20 environmental chemicals consisted of metals, (chlorinated) biphenyls, polyaromatic hydrocarbons, benzene, and ethanol and contributed 12% toward the total number of links- Each of the top-20 substances was covered by 2,000-10,000 articles during the decade. The numbers for the 10-year period were similar to the total numbers of pre-2000 articles on the same chemicals. However, substances considered a high priority from a regulatory viewpoint, due to lack of documentation, showed very low publication rates. The persistence in the scientific literature of the top-20 chemicals was only weakly related to their publication in journals with a high impact factor, but some substances achieved high citation rates.
Conclusions
The persistence of some environmental chemicals in the scientific literature may be due to a 'Matthew' principle of maintaining prominence for the very reason of having been well researched. Such bias detracts from the societal needs for documentation on less well known environmental hazards, and it may also impact negatively on the potentials for innovation and discovery in research.
doi:10.1186/1476-069X-10-96
PMCID: PMC3229577  PMID: 22074398
23.  Publication trends in newspapers and scientific journals for SSRIs and suicidality: a systematic longitudinal study 
BMJ Open  2011;1(2):e000290.
Background
In the period 2003–2008, the regulatory authorities issued several warnings restricting the use of selective serotonin re-uptake inhibitors (SSRIs) in paediatrics, in reaction to safety concerns regarding the risk of suicidality. In this study, the SSRIs and suicidality controversy serves as a template to analyse the long-term publication trends regarding the benefit/risk profile of medications. The aim is to ascertain differences (in terms of numbers, categories and timing) between negative and positive newspaper and journal articles on SSRIs and suicidality and to ascertain correlations between changes in the reports and regulatory warnings.
Methods
A systematic review of scientific articles (Embase) and the Netherlands (NL) and the UK newspapers (LexisNexis) was performed between 2000 and 2010. Categorisation was done by ‘effect’ (related treatment effect), ‘type of article’ and ‘age group’. The articles' positive-to-negative effect ratio was determined. Differences in distribution of effect categories were analysed across sources, type of article and age group using the Mann–Whitney (two subgroups) or Kruskal–Wallis test (three or more).
Findings
In total, 1141 articles were categorised: 352 scientific, 224 Dutch and 565 British newspaper articles. Scientific articles were predominantly on research and were positive, whereas newspaper articles were negative (ratios=3.50—scientific, 0.69—NL and 0.94—UK; p<0.001). Articles on paediatrics were less positive in scientific journals and more negative in newspapers (ratios=2.29—scientific, 0.26—NL and 0.20—UK; p<0.001), while articles on adults were positive overall (ratios=10.0—scientific, 1.06—NL and 1.70—UK; p<0.001). In addition, negative-effect reporting trends were exacerbated following regulatory warnings and were generally opinion articles, both in scientific journals and in newspapers (2003/2004 and after 2007).
Interpretation
The authors found a positive publication tendency inherent in journal research articles. This apparent positive publication bias present in scientific journals, however, does not seem to prevent the dissemination of ‘bad’ news about medications. The negative tendency present in Dutch and British newspapers was perceivable in the paediatrics group and during the warnings, indicating that national news media have informed the public about this international drug safety controversy on time.
Article summary
Article focus
Publication trends of the benefit/risk profile of medications might differ in time and during a drug safety case.
We analysed the long-term dynamics of publication trends in the context of the SSRIs and suicidality controversy.
The number of articles (in terms of positive, negative and neutral, as well as the type of article and age groups) were analysed in scientific journals and the Netherlands and the UK dailies from January 2000 to December 2009.
Key messages
We found a positive publication tendency in scientific journals that did not influence the dissemination of negative news in newspapers in the Netherlands and the UK.
The negative tendency in newspapers was predominant in paediatrics and during the warnings.
The public was informed on time about this drug safety controversy, although the information conveyed was not uniform (from scientific journals to newspapers).
Strengths and limitations of this study
Definition of the categories is limited by the researchers' criteria.
Two independent scorers reviewed the articles to avoid subjectivity during scoring.
More than 95% agreements between both research scorers were documented.
doi:10.1136/bmjopen-2011-000290
PMCID: PMC3236820  PMID: 22146889
24.  New Frontiers in Nematode Ecology 
Journal of Nematology  1993;25(3):374-382.
Future areas of emphasis for research and scholarship in nematode ecology are indicated by pressing agricultural and environmental issues, by new directions in applied nematology, and by current technological advances. Studies in nematode ecology must extend beyond observation, counting, and simple statistical analysis. Experimentation and the testing of hypotheses are needed for understanding the biological mechanisms of ecological systems. Opportunities for fruitful experimentation in nematode ecology are emerging at the ecosystem, community, population, and individual levels. Nematode ecologists will best promote their field of study by closely monitoring and participating in the advances, initiatives, developments, and directions in the larger field of ecology.
PMCID: PMC2619404  PMID: 19279783
Approach; biodiversity; concept; ecology; level of organization; nematode; population regulation; scale; theory; trophic roles; variability
25.  The ‘gender gap’ in authorship in nursing literature 
Objectives
Gender bias has been found in medical literature, with more men than women as first or senior authors of papers, despite about half of doctors being women. Nursing is about 90% female, so we aimed to determine if similar biases exist in nursing literature.
Design
Taking the eight non-specialist nursing journals with the highest impact factors for that profession, we counted the numbers of men and women first authors over 30 years.
Setting
We used nursing journals from around the world which attract the highest impact factors for nursing publication.
Participants
Eight journals qualified for entry, three from the United Kingdom, four from the United States of America, and one from Australia.
Main outcome measures
Using Chi-square and Fisher exact tests, we determined differences between the numbers of men and women across all the journals, between countries (USA, UK and Australia), changes over the 30 years, and changes within journals over time.
Results
Despite the small proportion of men in the nursing workforce, up to 30% of first authors were men. UK journals were more likely to have male authors than USA journals, and this increased over time. USA journals had proportions of male first authors consistent with the male proportion of its nursing workforce.
Conclusions
In the UK (though not in the USA) gender bias in nursing publishing exists, even though the nursing workforce is strongly feminized. This warrants further research, but is likely to be due to the same reasons for the gender gap in medical publishing; that is, female nurses take time out to have families, and social and family responsibilities prevent them taking opportunities for career progression, whereas men's careers often are not affected in such ways.
doi:10.1258/jrsm.2011.110015
PMCID: PMC3206719  PMID: 22048677

Results 1-25 (411943)