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3-Oxoolean-1-en-28-oic acid, isolated from the bark of Walsura pinnata Hassk, crystallized from n-hexane as an n-hexane 0.25-solvent 0.25-hydrate, C30H46O3·0.25C6H14·0.25H2O. There are two independent molecules in the asymmetric unit of the title compound. The three six-membered cyclohexane rings in each molecule adopt chair conformations and the carboxyl substituent occupies an axial/equatorial position. The two independent molecules are linked by a pair of O—Hcarboxyl⋯O hydrogen bonds into a dimer. The n-hexane molecule is disordered about a twofold rotation axis and the water molecule lies on a twofold rotation axis. In addition, the cyclohexone carbonyl group of one of the independent molecules is disordered over two sites with occupancies of 0.75 and 0.25.
doi:10.1107/S1600536809015086
PMCID: PMC2977831
PMID: 21583968
In the molecule of pinnatane A, C30H48O3, isolated from the bark of Walsura pinnata Hassk, the four cyclohexane rings adopt chair conformations; the carboxyl and hydroxy substituents occupy axial positions. The cyclohexene ring is envelope-shaped. Adjacent molecules are linked by O—H⋯O hydrogen bonds into a chain running along the c axis.
doi:10.1107/S1600536809015955
PMCID: PMC2969541
PMID: 21583174
The title compound, C30H50O5, was isolated from the bark of Aglaia smithii. There are two independent molecules in the asymmetric unit that differ in the orientation of the isopropenyl group attached to the cyclohexane ring. The cyclohexane rings in both molecules adopt chair conformations, whereas the cyclopentane and tetrahydrofuran rings adopt envelope conformations. The independent molecules are linked into a layer parallel to (010) by O—H⋯O hydrogen bonds.
doi:10.1107/S1600536810002072
PMCID: PMC2979682
PMID: 21579834
The title dammarane tritepene, 3α,20(S)-dihydroxydammar-24-ene, which crystallized out in a hydrated form, C30H52O2.1.075H2O, was isolated from the Aglaia eximia bark. The three cyclohexane rings adopt chair conformations. The cyclopentane has an envelope conformation with the quaternary C at position 14 as the flap atom with the maximum deviation of 0.288 (2) Å. The methylheptene side chain is disordered over two positions with 0.505 (1):0.495 (1) site occupancies and is axially attached with an (+)-syn-clinal conformation. The hydroxyl group at position 3 of dammarane is in a different conformation to the corresponding hydroxyl in Dammarenediol II. In the crystal, the dammarane and water molecules are linked by ODammarane—H⋯Owater and Owater—H⋯ODammarane hydrogen bonds into a three-dimensional network.
doi:10.1107/S1600536812040366
PMCID: PMC3515193
PMID: 23284420
In each of the two independent indene-4-spiropentane molecules in the asymmetric unit of the title 2:1 adduct, C19H18N6·0.5C5H4OS, the cyclohexene ring adopts a half-chair conformation and the cyclopentene and cyclopentane rings adopt envelope conformations. The mean plane through the cyclohexene/cyclopentene fused system is aligned at a dihedral angle of 77.9 (1)° with respect to the mean plane through the cyclopentane ring in one molecule and 87.0 (1)° in the other. In the crystal, adjacent indene-4-spiropentane molecules are linked by N—H⋯N hydrogen bonds into a three-dimensional network. The spaces within the network are occupied by the thiophene-2-carbaldehyde molecules. The thiophene-2-carbaldehyde unit is disordered over two positions of equal occupancy. The crystal studied was found to be a non-morohedral twin with two minor twin components of 18.4 and 9.7%.
doi:10.1107/S1600536810034434
PMCID: PMC2983394
PMID: 21587485
The title seco-dammarane triterpenoid, C27H42O4 (systematic name: 3-{(3S,3aR,5aR,6S,7S,9aR,9bR)-6,9a,9b-trimethyl-3-[(R)-2-methyl-5-oxotetrahydrofuran-2-yl]-7-(prop-1-en-2-yl)dodecahydro-1H-cyclopenta[a]naphthalen-6-yl}propanoic acid), has been isolated for the first time from the seeds of Aglaia forbesii. The molecule has three fused rings and all rings are in trans-fused. The two cyclohexane rings are in standard chair conformations and the cyclopentane ring adopts an envelope conformation. Its absolute configuration was determined by the refinement of the Flack parameter to 0.26 (17). In the crystal, molecules are linked into chains along [010] by O—H⋯O hydrogen bonds.
doi:10.1107/S1600536810009499
PMCID: PMC2984085
PMID: 21580698
The title compound, C28H44O4·0.56H2O, is a co-crystal of methyl isoeichlerialactone monohydrate as the major component and methyl isoeichlerialactone as the minor component in a 0.55778 (3):0.44222 (3) ratio. The conformations of both components are identical except for that of the –COOCH3 group of the methyl propanoate side chain on the cyclohexane ring which is positionally disordered over two orientations. The molecule of methyl isoeichlerialactone has three fused rings and all rings are trans-fused. The two cyclohexane rings are in standard chair conformations and the cyclopentane ring adopts an envelope conformation. In the crystal, weak C—H⋯O interactions link methyl isoeichlerialactone molecules into screw chains along [010]. The crystal structure is further stabilized by O—H⋯O hydrogen bonds and weak C—H⋯O interactions.
doi:10.1107/S1600536810018295
PMCID: PMC3007061
PMID: 21587839
The asymmetric unit of the title compound, C32H51N3O3, consists of two crystallographically independent molecules, A and B; the 2-methylpentane group of molecule A and the propane group of molecule B are each disordered over two sets of sites, with refined site-occupancies of 0.825 (5):0.175 (5) and 0.630 (18):0.370 (18), respectively. In both molecules, the three cyclohexane rings in the steroid fused ring systems adopt chair conformations while the cyclopentane rings adopt envelope and twist conformations in molecules A and B, respectively. In the crystal, N—H⋯O and C—H⋯O hydrogen bonds link the two independent molecules together, generating R
2
1(7) and R
2
2(8) ring motifs.
doi:10.1107/S1600536812001432
PMCID: PMC3275224
PMID: 22347080
9.
cis-3-Methyl-1-phenyl-8a,9,10,11,12,12a,12b-hexahydro-1H,3bH-pyrazolo[3,4:2′,3′]pyrano[4′,5′,6′-kl]xanthene
The asymmetric unit of the title compound, C23H22N2O2, contains two independent molecules, A and B. The cyclohexane ring of molecule B is disordered, with occupancies for the major and minor conformers of 0.570 (9) and 0.430 (9), respectively. The cyclohexane ring adopts a boat conformation in molecule A and in the major conformer of molecule B, and a chair conformation in the minor conformer of molecule B. In both independent molecules, one of the dihydropyran rings adopts a boat conformation while the other is in a half-chair conformation. The dihedral angle between the pyrazole and phenyl rings is 16.0 (1)° in molecule A and 12.9 (1)° in molecule B. The crystal packing is stabilized by C—H⋯O and C—H⋯N intermolecular hydrogen bonds.
doi:10.1107/S1600536807065348
PMCID: PMC2915303
PMID: 21200811
The asymmetric unit of the title compound, C30H48ClN3O, contains two molecules, A and B. In both molecules, the three cyclohexane rings in the steroid fused ring systems adopt chair conformations, while the cyclopentane rings adopt envelope and twist conformations in molecules A and B, respectively. In molecule B, the cyano group is disordered over two orientations with refined site-occupancies of 0.593 (8) and 0.407 (8). An intramolecular C—H⋯N interaction forms an S(10) ring in both molecules. In the crystal, molecules are linked by N—H⋯O, C—H⋯O and C—H⋯N interactions, resulting is chains propagating along the a-axis direction.
doi:10.1107/S1600536812009336
PMCID: PMC3344016
PMID: 22589925
The asymmetric unit of the title compound, C27H45ClO, consists of two crystallographically independent molecules. In both molecules, the three cyclohexane rings in the steroid fused-ring systems adopt chair conformations, while the cyclopentane ring adopts a half-chair conformation in one molecule and an envelope conformation in the other. In the crystal, the molecules are linked into a two-dimensional network by weak C—H⋯O hydrogen bonds. The crystal studied is a nonmerohedral twin with a refined ratio of twin components of 0.264 (3):0.736 (3).
doi:10.1107/S1600536812012482
PMCID: PMC3344147
PMID: 22606150
In the title compound, C23H34O4, the C/D and D/E rings are trans fused and the A/B ring possesses an anti fusion. The two cyclohexane rings adopt a chair conformation while the cyclohexene ring exhibits a half-chair conformation. The cyclopentane ring displays an envelope conformation with the C atom bearing the methyl group as the flap. In the crystal, the molecules are linked by O—H⋯O hydrogen bonds, forming chains along the b axis.
doi:10.1107/S1600536813002493
PMCID: PMC3569832
PMID: 23424578
In the title molecule, C30H52O4, the three six-membered rings are in chair conformations, the cyclopentane ring is in an envelope form and the tetrahydrofuran ring has a conformation intermediate between half-chair and sofa. In the crystal, molecules are linked by intermolecular O—H⋯O hydrogen bonds into helical chains along [100]. Two intramolecular O—H⋯O hydrogen bonds are also present. One C atom of the tetrahydrofuran ring and its attached H atoms are equally disordered over two sets of sites.
doi:10.1107/S1600536811028418
PMCID: PMC3213554
PMID: 22091131
In the decahydrophenanthrenone ring system of the title compound, C27H44O, the two cyclohexane rings adopt chair conformations, whereas the cyclohexene ring adopts an envelope conformation. The cyclopentane ring is twisted. In the crystal structure, molecules are stacked along the a axis, but no significant intermolecular interactions are observed.
doi:10.1107/S1600536810021598
PMCID: PMC3007018
PMID: 21587894
The title compound, C15H20O3, a sesquiterpene lactone, was isolated from the aerial parts of Carpesium minus Hemsl. (Compositae). The molecule is composed of three rings, with the two cyclohexane rings in chair conformations and the cyclopentane ring adopting a twist conformation. The A/B ring junction is trans-fused. The absolute configuration shown has been arbitrarily assigned. In the crystal, molecules are linked into [100] chains by O—H⋯O hydrogen bonds.
doi:10.1107/S1600536812012470
PMCID: PMC3344144
PMID: 22606147
16.
4,5,7,8,17-Pentahydroxy-14,18-dimethyl-6-methylene-3,10-dioxapentacyclo[9.8.0.01,7.04,19.013,18]nonadec-14-ene-9,16-dione methanol solvate dihydrate
The title quassinoid compound, C20H24O9·CH3OH·2H2O, is a natural eurycomanone isolated from the roots of Eurycoma longifolia. The molecules contain a fused five-ring system, with one tetrahydrofuran ring adopting an envelope conformation, one tetrahydropyran-2-one ring in a screw boat conformation, one cyclohexenone ring in a half-chair conformation and two cyclohexane rings in chair conformations. Intramolecular C—H⋯O interactions generate S(5) ring motifs and an O—H⋯O interaction generates an S(7) ring motif. In the crystal, molecules are linked via intermolecular O—H⋯O interactions along the b axis and further stacked along a axis. The absolute configuration of the title compound was inferred from previously solved structures of its analogues.
doi:10.1107/S1600536809010502
PMCID: PMC2968991
PMID: 21582604
The title compound, C26H28N2O9·1.5H2O, the product of an acid-catalysed Wagner–Meerwein skeletal rearrangement, crystallizes as a sesquihydrate with the O atom of one of the two independent water molecules occupying a special position on a twofold axis. The organic molecule comprises a fused pentacyclic system containing two five-membered rings (cyclopentane and tetrahydrofuran) and three six-membered rings (piperidinone, tetrahydropyridine and benzene). The five-membered rings have the usual envelope conformations, and the central six-membered piperidinone and tetrahydropyridine rings adopt boat and sofa conformations, respectively. In the crystal, there are three independent O—H⋯O hydrogen bonds, which link the organic molecules and water molecules into complex two-tier layers parallel to (001). The layers are further linked into a three-dimensional framework by attractive intermolecular carbonyl–carbonyl interactions.
doi:10.1107/S160053680905363X
PMCID: PMC2980137
PMID: 21580091
In the title compound, C31H23NO2S, the pyrrolidine ring adopts an envelope conformation (with the spiro C atom as the flap), while the thiazolidine ring and the two cyclopentane rings adopt twisted conformations. The mean plane through the hexahydropyrrolo[1,2-c]thiazole ring [r.m.s deviation = 0.400 (1) Å] forms dihedral angles of 76.83 (4), 80.70 (5) and 79.00 (4)° with the benzene ring and the mean planes of the dihydroacenaphthylene and the dihydroindene rings, respectively. In the crystal, molecules are linked by C—H⋯O hydrogen bonds into sheets lying parallel to the bc plane. One of the ketone O atoms accepts three such bonds. Weak C—H⋯π interactions are also observed.
doi:10.1107/S1600536812013293
PMCID: PMC3344191
PMID: 22606194
The title compound, C14H18N2O, was synthesized by the reaction of cyclohexanone and 2-amino-5-methylbenzonitrile. In the molecule, the cyclohexane ring displays a chair conformation, whereas the 1,3-diazacyclohexane moiety of the bicyclic system has a sofa conformation with the spiro C atom displaced by 0.603 (2) Å from the rest of the atoms of the 1,3-diazacyclohexane ring [planar within 0.052 (2) Å]. Molecules are linked into centrosymmetric dimers via N—H⋯O hydrogen bonds.
doi:10.1107/S1600536809014111
PMCID: PMC2977775
PMID: 21583911
In the title molecule, C34H53BrO4, all the cyclohexane rings adopt chair conformations, while the cyclopentane ring adopts an envelope conformation. In the crystal, weak intermolecular C—H⋯O hydrogen bonds link the molecules into corrugated sheets parallel to the ab plane.
doi:10.1107/S1600536809027640
PMCID: PMC2977272
PMID: 21583658
The title compound, C16H17NOS2, consists of a carbazole skeleton with tetrahydrofuran and dithiolane rings. In the indole ring system, the benzene and pyrrole rings are nearly coplanar, forming a dihedral angle of 1.57 (15)°. The cyclohexenone and tetrahydrofuran rings have envelope conformations, while the dithiolane ring adopts a twist conformation. In the crystal structure, pairs of weak intermolecular N—H⋯S hydrogen bonds link the molecules into centrosymmetric dimers with R
2
2(16) ring motifs. Weak C—H⋯π interactions may further stabilize the structure.
doi:10.1107/S1600536809006035
PMCID: PMC2968651
PMID: 21582250
The asymmetric unit of the title xanthene compound, C25H30O5, contains two molecules in which the pyran ring and the dimethoxyphenyl ring are nearly perpendicular to one another [dihedral angles = 86.81 (8) and 84.45 (9)°]. One of the methoxy groups in one molecule is twisted away from the phenyl ring [C—O—C—C torsion angle = −103.40 (16)°]. The pyran ring adopts a boat conformation whereas the two fused cyclohexane rings adopt envelope conformations in both molecules. In the crystal, molecules are linked into a three-dimensional network by C—H⋯O hydrogen bonds.
doi:10.1107/S1600536811023014
PMCID: PMC3152024
PMID: 21837111
In the title compound, C20H22O5, an S(6) ring motif is formed by an intramolecular C—H⋯O hydrogen bond, which contributes to the stabilization of the molecule. In the xanthene system, the cyclohexane ring adopts a chair conformation, the cyclohexene ring adopts a half-boat conformation and the tetrahydropyran ring adopts a half-chair conformation. The mean plane of the four essentially planar atoms of the tetrahydropyran ring [r.m.s deviation = 0.092 (1) Å] forms a dihedral angle of 64.13 (6)° with the mean plane of the methoxyphenyl group. In the crystal, intermolecular O—H⋯O and weak C—H⋯O hydrogen bonds link molecules into chains along the a axis, which are further stabilized by C—H⋯π interactions.
doi:10.1107/S1600536810050191
PMCID: PMC3050262
PMID: 21522746
The title compound, the product of an acid-catalysed Wagner–Meerwein skeletal rearrangement, crystallizes as an ethanol monosolvate, C20H21NO8·C2H6O. The title molecule comprises a fused tricyclic system containing two five-membered rings (cyclopentane and tetrahydrofuran) in the usual envelope conformations and one six-membered ring (piperidinone) adopting a flattened twist–boat conformation.
doi:10.1107/S1600536809045528
PMCID: PMC2971959
PMID: 21578721
25.
(6aS*,6bS*,11R*,11aR*)-6-(2-Furylmethyl)-5,12-dioxo-5,6,6a,6b,7,11,11a,12-octahydrofuro[3′,2′:5,6]isoindolo[2,1-a]quinazoline-11-carboxylic acid
The title compound, C23H18N2O6, is the product of an intramolecular thermal cycloaddition within 1-malein-2-[(E)-2-(2-furyl)vinyl]-4-oxo-3,4-dihydroquinazoline. The molecule comprises a previously unknown fused pentacyclic system containing two five-membered rings (2-pyrrolidinone and furan) and three six-membered rings (benzene, 2,3-dihydro-4-pyrimidinone and dihydrocyclohexane). The central five-membered pyrrolidinone ring has the usual envelope conformation. The six-membered dihydropyrimidinone and dihydrocyclohexane rings adopt a half-boat and a half-chair conformation, respectively. The dihedral angle between the planes of the terminal benzene and furan rings is 45.99 (7)°. In the crystal, O—H⋯O hydrogen bonds link the molecules into centrosymmetric dimers. Weak C—H⋯O hydrogen bonds consolidate further the crystal packing, which exhibits π–π interactions, with a short distance of 3.556 (3) Å between the centroids of benzene rings of neighbouring molecules.
doi:10.1107/S160053681104311X
PMCID: PMC3247426
PMID: 22220044