PMCC PMCC

Search tips
Search criteria

Advanced
Results 1-25 (109314)

Clipboard (0)
None

Related Articles

1.  3-Oxoolean-1-en-28-oic acid–n-hexa­ne–water (4/1/1) from the bark of Walsura pinnata Hassk 
3-Oxoolean-1-en-28-oic acid, isolated from the bark of Walsura pinnata Hassk, crystallized from n-hexane as an n-hexane 0.25-solvent 0.25-hydrate, C30H46O3·0.25C6H14·0.25H2O. There are two independent mol­ecules in the asymmetric unit of the title compound. The three six-membered cyclo­hexane rings in each mol­ecule adopt chair conformations and the carboxyl substituent occupies an axial/equatorial position. The two independent mol­ecules are linked by a pair of O—Hcarbox­yl⋯O hydrogen bonds into a dimer. The n-hexane mol­ecule is disordered about a twofold rotation axis and the water mol­ecule lies on a twofold rotation axis. In addition, the cyclo­hexone carbonyl group of one of the independent mol­ecules is disordered over two sites with occupancies of 0.75 and 0.25.
doi:10.1107/S1600536809015086
PMCID: PMC2977831  PMID: 21583968
2.  Pinnatane A from the bark of Walsura pinnata Hassk 
In the mol­ecule of pinnatane A, C30H48O3, isolated from the bark of Walsura pinnata Hassk, the four cyclo­hexane rings adopt chair conformations; the carboxyl and hydr­oxy substituents occupy axial positions. The cyclo­hexene ring is envelope-shaped. Adjacent mol­ecules are linked by O—H⋯O hydrogen bonds into a chain running along the c axis.
doi:10.1107/S1600536809015955
PMCID: PMC2969541  PMID: 21583174
3.  (20S)-24,25-Dihydr­oxy-20,24-ep­oxy-3,4-secodammar-4(28)-en-3-oic acid from Aglaia smithii  
The title compound, C30H50O5, was isolated from the bark of Aglaia smithii. There are two independent mol­ecules in the asymmetric unit that differ in the orientation of the isopropenyl group attached to the cyclo­hexane ring. The cyclo­hexane rings in both mol­ecules adopt chair conformations, whereas the cyclo­pentane and tetra­hydro­furan rings adopt envelope conformations. The independent mol­ecules are linked into a layer parallel to (010) by O—H⋯O hydrogen bonds.
doi:10.1107/S1600536810002072
PMCID: PMC2979682  PMID: 21579834
4.  Absolute configuration of isoeichlerialactone 
The title seco-dammarane triterpenoid, C27H42O4 (systematic name: 3-{(3S,3aR,5aR,6S,7S,9aR,9bR)-6,9a,9b-trimethyl-3-[(R)-2-methyl-5-oxotetra­hydro­furan-2-yl]-7-(prop-1-en-2-yl)dodeca­hydro-1H-cyclo­penta­[a]naphthalen-6-yl}propanoic acid), has been isolated for the first time from the seeds of Aglaia forbesii. The mol­ecule has three fused rings and all rings are in trans-fused. The two cyclo­hexane rings are in standard chair conformations and the cyclo­pentane ring adopts an envelope conformation. Its absolute configuration was determined by the refinement of the Flack parameter to 0.26 (17). In the crystal, mol­ecules are linked into chains along [010] by O—H⋯O hydrogen bonds.
doi:10.1107/S1600536810009499
PMCID: PMC2984085  PMID: 21580698
5.  Absolute configuration of methyl isoeichlerialactone 
The title compound, C28H44O4·0.56H2O, is a co-crystal of methyl isoeichlerialactone monohydrate as the major component and methyl isoeichlerialactone as the minor component in a 0.55778 (3):0.44222 (3) ratio. The conformations of both components are identical except for that of the –COOCH3 group of the methyl propanoate side chain on the cyclo­hexane ring which is positionally disordered over two orientations. The mol­ecule of methyl isoeichlerialactone has three fused rings and all rings are trans-fused. The two cyclo­hexane rings are in standard chair conformations and the cyclo­pentane ring adopts an envelope conformation. In the crystal, weak C—H⋯O inter­actions link methyl isoeichlerialactone mol­ecules into screw chains along [010]. The crystal structure is further stabilized by O—H⋯O hydrogen bonds and weak C—H⋯O inter­actions.
doi:10.1107/S1600536810018295
PMCID: PMC3007061  PMID: 21587839
6.  3β-Acet­oxy-5α-cholestan-6-one 2-cyano­acetyl­hydrazone 
The asymmetric unit of the title compound, C32H51N3O3, consists of two crystallographically independent mol­ecules, A and B; the 2-methyl­pentane group of mol­ecule A and the propane group of mol­ecule B are each disordered over two sets of sites, with refined site-occupancies of 0.825 (5):0.175 (5) and 0.630 (18):0.370 (18), respectively. In both mol­ecules, the three cyclo­hexane rings in the steroid fused ring systems adopt chair conformations while the cyclo­pentane rings adopt envelope and twist conformations in mol­ecules A and B, respectively. In the crystal, N—H⋯O and C—H⋯O hydrogen bonds link the two independent mol­ecules together, generating R 2 1(7) and R 2 2(8) ring motifs.
doi:10.1107/S1600536812001432
PMCID: PMC3275224  PMID: 22347080
7.  3β-Chloro-6-[2-(2-cyano­acet­yl)hydrazin-1-yl­idene]-5α-cholestane 
The asymmetric unit of the title compound, C30H48ClN3O, contains two mol­ecules, A and B. In both mol­ecules, the three cyclo­hexane rings in the steroid fused ring systems adopt chair conformations, while the cyclo­pentane rings adopt envelope and twist conformations in mol­ecules A and B, respectively. In mol­ecule B, the cyano group is disordered over two orientations with refined site-occupancies of 0.593 (8) and 0.407 (8). An intra­molecular C—H⋯N inter­action forms an S(10) ring in both mol­ecules. In the crystal, mol­ecules are linked by N—H⋯O, C—H⋯O and C—H⋯N inter­actions, resulting is chains propagating along the a-axis direction.
doi:10.1107/S1600536812009336
PMCID: PMC3344016  PMID: 22589925
8.  3-epi-Dammarenediol II 1.075 hydrate: a dammarane triterpene from the bark of Aglaia eximia  
The title dammarane tritepene, 3α,20(S)-dihy­droxy­dammar-24-ene, which crystallized out in a hydrated form, C30H52O2.1.075H2O, was isolated from the Aglaia eximia bark. The three cyclo­hexane rings adopt chair conformations. The cyclo­pentane has an envelope conformation with the quaternary C at position 14 as the flap atom with the maximum deviation of 0.288 (2) Å. The methyl­heptene side chain is disordered over two positions with 0.505 (1):0.495 (1) site occupancies and is axially attached with an (+)-syn-clinal conformation. The hydroxyl group at position 3 of dammarane is in a different conformation to the corresponding hydroxyl in Dammarenediol II. In the crystal, the dammarane and water mol­ecules are linked by ODammarane—H⋯Owater and Owater—H⋯ODammarane hydrogen bonds into a three-dimensional network.
doi:10.1107/S1600536812040366
PMCID: PMC3515193  PMID: 23284420
9.  3β-Chloro-5α-cholestan-6-one 
The asymmetric unit of the title compound, C27H45ClO, consists of two crystallographically independent mol­ecules. In both mol­ecules, the three cyclo­hexane rings in the steroid fused-ring systems adopt chair conformations, while the cyclo­pentane ring adopts a half-chair conformation in one mol­ecule and an envelope conformation in the other. In the crystal, the mol­ecules are linked into a two-dimensional network by weak C—H⋯O hydrogen bonds. The crystal studied is a nonmerohedral twin with a refined ratio of twin components of 0.264 (3):0.736 (3).
doi:10.1107/S1600536812012482
PMCID: PMC3344147  PMID: 22606150
10.  3β-Acet­oxy-19-hy­droxy-Δ5-pregnen-20-one 
In the title compound, C23H34O4, the C/D and D/E rings are trans fused and the A/B ring possesses an anti fusion. The two cyclo­hexane rings adopt a chair conformation while the cyclo­hexene ring exhibits a half-chair conformation. The cyclo­pentane ring displays an envelope conformation with the C atom bearing the methyl group as the flap. In the crystal, the mol­ecules are linked by O—H⋯O hydrogen bonds, forming chains along the b axis.
doi:10.1107/S1600536813002493
PMCID: PMC3569832  PMID: 23424578
11.  (3S,12R,20S,24R)-20,24-Ep­oxy­dammarane-3,12,25-triol 
In the title mol­ecule, C30H52O4, the three six-membered rings are in chair conformations, the cyclo­pentane ring is in an envelope form and the tetra­hydro­furan ring has a conformation inter­mediate between half-chair and sofa. In the crystal, mol­ecules are linked by inter­molecular O—H⋯O hydrogen bonds into helical chains along [100]. Two intra­molecular O—H⋯O hydrogen bonds are also present. One C atom of the tetrahydrofuran ring and its attached H atoms are equally disordered over two sets of sites.
doi:10.1107/S1600536811028418
PMCID: PMC3213554  PMID: 22091131
12.  5α-Hy­droxy­eudesm-4(15),11(13)-dien-8β,12-olide 
The title compound, C15H20O3, a sesquiterpene lactone, was isolated from the aerial parts of Carpesium minus Hemsl. (Compositae). The mol­ecule is composed of three rings, with the two cyclo­hexane rings in chair conformations and the cyclo­pentane ring adopting a twist conformation. The A/B ring junction is trans-fused. The absolute configuration shown has been arbitrarily assigned. In the crystal, mol­ecules are linked into [100] chains by O—H⋯O hydrogen bonds.
doi:10.1107/S1600536812012470
PMCID: PMC3344144  PMID: 22606147
13.  4,5,7,8,17-Penta­hydr­oxy-14,18-dimethyl-6-methyl­ene-3,10-dioxapenta­cyclo­[9.8.0.01,7.04,19.013,18]nona­dec-14-ene-9,16-dione methanol solvate dihydrate 
The title quassinoid compound, C20H24O9·CH3OH·2H2O, is a natural eurycomanone isolated from the roots of Eurycoma longifolia. The mol­ecules contain a fused five-ring system, with one tetra­hydro­furan ring adopting an envelope conformation, one tetra­hydro­pyran-2-one ring in a screw boat conformation, one cyclo­hexenone ring in a half-chair conformation and two cyclo­hexane rings in chair conformations. Intra­molecular C—H⋯O inter­actions generate S(5) ring motifs and an O—H⋯O inter­action generates an S(7) ring motif. In the crystal, mol­ecules are linked via inter­molecular O—H⋯O inter­actions along the b axis and further stacked along a axis. The absolute configuration of the title compound was inferred from previously solved structures of its analogues.
doi:10.1107/S1600536809010502
PMCID: PMC2968991  PMID: 21582604
14.  Cholest-5-en-7-one 
In the deca­hydro­phenanthrenone ring system of the title compound, C27H44O, the two cyclo­hexane rings adopt chair conformations, whereas the cyclo­hexene ring adopts an envelope conformation. The cyclo­pentane ring is twisted. In the crystal structure, mol­ecules are stacked along the a axis, but no significant inter­molecular inter­actions are observed.
doi:10.1107/S1600536810021598
PMCID: PMC3007018  PMID: 21587894
15.  Methyl 7,8-diacet­oxy-11-oxo-5-(2-oxo­pyrrolidin-1-yl)-7,9-epoxy­cyclo­penta­[4,5]pyrido[1,2-a]quinoline-10-carboxyl­ate sesquihydrate 
The title compound, C26H28N2O9·1.5H2O, the product of an acid-catalysed Wagner–Meerwein skeletal rearrangement, crystallizes as a sesquihydrate with the O atom of one of the two independent water mol­ecules occupying a special position on a twofold axis. The organic mol­ecule comprises a fused penta­cyclic system containing two five-membered rings (cyclo­pentane and tetra­hydro­furan) and three six-membered rings (piperidinone, tetra­hydro­pyridine and benzene). The five-membered rings have the usual envelope conformations, and the central six-membered piperidinone and tetra­hydro­pyridine rings adopt boat and sofa conformations, respectively. In the crystal, there are three independent O—H⋯O hydrogen bonds, which link the organic mol­ecules and water mol­ecules into complex two-tier layers parallel to (001). The layers are further linked into a three-dimensional framework by attractive inter­molecular carbon­yl–carbonyl inter­actions.
doi:10.1107/S160053680905363X
PMCID: PMC2980137  PMID: 21580091
16.  3,28-Diacet­oxy-29-bromo­betulin 
In the title mol­ecule, C34H53BrO4, all the cyclo­hexane rings adopt chair conformations, while the cyclo­pentane ring adopts an envelope conformation. In the crystal, weak inter­molecular C—H⋯O hydrogen bonds link the mol­ecules into corrugated sheets parallel to the ab plane.
doi:10.1107/S1600536809027640
PMCID: PMC2977272  PMID: 21583658
17.  6-Amino-5-(1-amino-2,2-dicyano­vin­yl)-3,3a,4,5-tetra­hydro-2H-indene-4-spiro-1′-cyclo­pentane-3a,7-dicarbonitrile–thio­phene-2-carbaldehyde (1/0.5) 
In each of the two independent indene-4-spiro­pentane mol­ecules in the asymmetric unit of the title 2:1 adduct, C19H18N6·0.5C5H4OS, the cyclo­hexene ring adopts a half-chair conformation and the cyclo­pentene and cyclo­pentane rings adopt envelope conformations. The mean plane through the cyclo­hexene/cyclo­pentene fused system is aligned at a dihedral angle of 77.9 (1)° with respect to the mean plane through the cyclo­pentane ring in one mol­ecule and 87.0 (1)° in the other. In the crystal, adjacent indene-4-spiro­pentane mol­ecules are linked by N—H⋯N hydrogen bonds into a three-dimensional network. The spaces within the network are occupied by the thio­phene-2-carbaldehyde mol­ecules. The thio­phene-2-carbaldehyde unit is disordered over two positions of equal occupancy. The crystal studied was found to be a non-morohedral twin with two minor twin components of 18.4 and 9.7%.
doi:10.1107/S1600536810034434
PMCID: PMC2983394  PMID: 21587485
18.  Methyl 4,5-diacet­oxy-1-oxo-2-phenyl­perhydro-4,6-epoxy­cyclo­penta­[c]pyridine-7-carboxyl­ate ethanol solvate 
The title compound, the product of an acid-catalysed Wagner–Meerwein skeletal rearrangement, crystallizes as an ethanol monosolvate, C20H21NO8·C2H6O. The title mol­ecule comprises a fused tricyclic system containing two five-membered rings (cyclo­pentane and tetra­hydro­furan) in the usual envelope conformations and one six-membered ring (piperidinone) adopting a flattened twist–boat conformation.
doi:10.1107/S1600536809045528
PMCID: PMC2971959  PMID: 21578721
19.  1-Deacet­oxy-1-oxocaesalmin 
The title compound, C24H30O7, is a diterpenoid isolated from the seeds of Caesalpinia minax. It consists of two cyclo­hexane rings (A and B), one unsaturated six-membered ring (C) and one furan ring (D). The stereochemistry of the ring junctures is A/B trans and B/C trans. Rings A and B have normal chair conformations while C adopts a twisted half-chair conformation due to fusion to the furan ring which is planar [r.m.s. deviation = 0.0009 (2) Å]. In the crystal, hydroxyl O—H⋯Ocarbon­yl hydrogen bonds link the mol­ecules into a chain structure extending along the a-axis direction.
doi:10.1107/S1600536814011040
PMCID: PMC4051044  PMID: 24940245
20.  N-Carbamothioyl­amino-7-oxabicyclo­[2.2.1]hept-5-ene-2,3-dicarboximide 
The title compound, C9H9N3O3S, comprises a racemic mixture of chiral mol­ecules containing four stereogenic centres. The cyclo­hexane ring tends towards a boat conformation, while the tetra­hydro­furan ring and the dihydro­furan ring adopt envelope conformations. The dihedral angle between the thio­semicarbazide fragment and the fused-ring system is 77.20 (10)°. The crystal structure is stabilized by two inter­molecular N—H⋯O hydrogen bonds.
doi:10.1107/S160053681004835X
PMCID: PMC3011812  PMID: 21589603
21.  cis-Cyclo­heptane-1,2-diol 
The title compound, C7H14O2, is a vicinal diol derived from cyclo­heptane with cis-orientated hydr­oxy groups. The mol­ecules shows no non-crystallographic symmetry. The O—C—C—O torsion angles of both mol­ecules present in the asymmetric unit [−66.4 (2) and −66.9 (2)°] are similar to those in trans-configured cyclo­hexane derivatives (including pyran­oses) as well as rac-trans-cyclo­heptane-1,2-diol, but smaller than those in trans-configured cyclo­pentane derivatives (including furan­oses). In the crystal structure, O—H⋯O hydrogen bonds furnish the formation of sheets parallel to [110].
doi:10.1107/S160053680905051X
PMCID: PMC2971971  PMID: 21578965
22.  (±)-Cyclo­hexane-1,2-diyl bis­(4-nitro­benzoate) 
The crystal structure of the title compound, C20H18N2O8, has been investigated to establish the relative stereochemistry between the ester groups. The cyclo­hexane ring adopts a chair conformation, in which the two ester groups occupy the adjacent equatorial positions in a trans relationship with each other. The mol­ecules assemble in the crystal as chains along the c axis via C—H⋯π inter­actions between the cyclo­hexane ring and a pair of nitro­phenyl rings of the neighbouring mol­ecule. Also observed are π–π stacking inter­actions between the nitro­phenyl rings of neighbouring chains, with a perpendicular distance between these rings of 3.409 Å and a slippage of 0.969 Å.
doi:10.1107/S1600536808033874
PMCID: PMC2959677  PMID: 21581034
23.  4′-(4-Bromo­phen­yl)-1′-methyl­dispiro­[acenaphthyl­ene-1,2′-pyrrolidine-3′,2′′-indane]-2,1′′(1H)-dione 
In the title compound, C30H22BrNO2, the cyclo­pentane ring of the dihydro­acenaphthyl­ene group and the pyrrolidine ring are both in envelope conformations with the spiro C atom and N atom, respectively, as the flap atom. The cyclo­pentane ring of the indane group adopts a half-chair conformation. A weak intra­molecular C—H⋯O hydrogen bond forms an S(8) ring motif. The naphthalene ring system of the dihydro­acenaphthyl­ene group forms dihedral angles of 41.76 (6) and 42.17 (6)° with the benzene ring of the bromo­phenyl group and the benzene ring of the indane group, respectively. The dihedral angle between the two benzene rings is 83.92 (7)°. In the crystal, mol­ecules are linked by weak C—H⋯O and C—H⋯N hydrogen bonds into a two-dimensional network parallel to the ac plane. Weak C—H⋯π inter­actions are also observed.
doi:10.1107/S1600536812014213
PMCID: PMC3344476  PMID: 22590238
24.  cis-3-Methyl-1-phenyl-8a,9,10,11,12,12a,12b-hexa­hydro-1H,3bH-pyrazolo[3,4:2′,3′]pyrano[4′,5′,6′-kl]xanthene 
The asymmetric unit of the title compound, C23H22N2O2, contains two independent mol­ecules, A and B. The cyclo­hexane ring of mol­ecule B is disordered, with occupancies for the major and minor conformers of 0.570 (9) and 0.430 (9), respectively. The cyclo­hexane ring adopts a boat conformation in mol­ecule A and in the major conformer of mol­ecule B, and a chair conformation in the minor conformer of mol­ecule B. In both independent mol­ecules, one of the dihydro­pyran rings adopts a boat conformation while the other is in a half-chair conformation. The dihedral angle between the pyrazole and phenyl rings is 16.0 (1)° in mol­ecule A and 12.9 (1)° in mol­ecule B. The crystal packing is stabilized by C—H⋯O and C—H⋯N inter­molecular hydrogen bonds.
doi:10.1107/S1600536807065348
PMCID: PMC2915303  PMID: 21200811
25.  4′-(4-Fluoro­phen­yl)-1′-methyl­dispiro­[indane-2,2′-pyrrolidine-3′,2′′-indane]-1,3,1′′-trione methanol hemisolvate 
The asymmetric unit of the title compound, C29H24FNO5·0.5CH3OH, contains two independent mol­ecules and a one methanol solvent mol­ecule. The methanol mol­ecule is O—H⋯O hydrogen bonded to one of the independent mol­ecules. The pyrrolidine rings in both mol­ecules adopt half-chair conformations, while the cyclo­pentane rings within the indane groups are in flattened envelope conformations, with the spiro C atoms forming the flaps. The benzene rings of the indane ring systems form a dihedral angle of 35.06 (7)° in one independent mol­ecule and 31.16 (8)° in the other. The fluoro-substituted benzene ring forms dihedral angles of 65.35 (6) and 85.87 (7)° with the indane group benzene rings in one mol­ecule, and 72.78 (8) and 77.27 (8)° in the other. In each mol­ecule, a weak intra­molecular C—H⋯O hydrogen bond forms an S(6) ring motif. In the crystal, weak C—H⋯O, C—H⋯N and C—H⋯F hydrogen bonds link the mol­ecules into a three-dimensional network.
doi:10.1107/S1600536813009987
PMCID: PMC3648276  PMID: 23723896

Results 1-25 (109314)