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The chemically achiral title molecule, [Ti(C4H10N)2(C21H16N2)], crystallizes in the chiral space group P21. All three N atoms coordinating to the TiIV atom adopt planar environments [sums of valence angles = 359.5 (6), 360.0 (7) and 360.0 (6)°], which is indicative of pπ–dπ donation from all of these N atoms to the metal and, thus, of the formal 18 e− nature of the complex. The overall coordination about the TiIV atom is distorted tetrahedral, assuming the cyclopentadienyl ring occupies one coordination site. The Ti—Nimidazole amide-type bond is longer by approximately 0.16 Å than the other two Ti—Namide bonds.
doi:10.1107/S1600536811012396
PMCID: PMC3089115
PMID: 21754286
The dinuclear title complex, [Ti2(C10H15)2(C6F5O)4O], features two TiIV atoms bridged by an O atom, which lies on an inversion centre. The TiIV atom is bonded to a η5-pentamethylcyclopentadienyl ring, two pentafluorophenolate anions and to the bridging O atom. The environment around the TiIV atom can be considered as a distorted tetrahedron. The cyclopentadienyl ring is disordered over two sets of sites [site occupancy = 0.824 (8) for the major component].
doi:10.1107/S1600536811029357
PMCID: PMC3212204
PMID: 22090906
In the title compound, [Ti(C8H13Si)(C11H21Si2)Cl2], the TiIV atom is bonded to two Cl atoms, one 1,3-bis(trimethylsilyl)cyclopentadienyl (Si2Cp) and one (trimethylsilyl)cyclopentadienyl ring (SiCp). The Si2Cp centroid–titanium distance is 2.0763 (10) Å and the SiCp centroid–titanium distance is 2.0793 (10) Å. The angle subtended at the Ti atom by the centroids of both cyclopentadienyl rings is 131.22 (4)° and the Cl—Ti—Cl angle is 94.14 (2)°.
doi:10.1107/S1600536811046228
PMCID: PMC3238619
PMID: 22199510
The molecular structure of the title compound, [Fe(C5H5)(C13H4F5)], consists of a ferrocenyl group and a 2,3,4,5,6-pentafluorobenzene group linked through an ethyne spacer. The crystal packing is dominated by intermolecular C—H⋯F hydrogen bonds, C—F⋯π interactions between the pentafluorobenzene groups [F⋯centroid distances = 3.882 (2) and 3.884 (2) Å] and π–π interactions between the pentafluorobenzene and cyclopentadienyl rings [centroid–centroid distance = 3.741 (1) Å].
doi:10.1107/S1600536810026772
PMCID: PMC3007523
PMID: 21588152
A series of ferrocenyl ester complexes, varying the lipophilic character of the pendant groups, was prepared and characterized by spectroscopic and analytical methods. The syntheses of Fe(C5H4CO2CH3)2, Fe(CpCOOCH3) (CpCOO
CH2CH3), and
Fe(CpCOOCH2CH3)2 are reported. The solid-state structure of Fe(C5H4CO2CH3)2 has been determined by X-ray crystallography. Fe(C5H4CO2CH3)2 has the cyclopentadienyl rings virtually in an eclipsed conformation with the pendant groups not completely opposite to each other. Cyclic voltammetry characterization showed that the functionalized ferrocenes oxidize at potentials, Epa, higher than ferrocene as a result of the electro withdrawing effect of the pendant groups on the cyclopentadienyl ligand. The cytotoxicities of Fe(C5H4CO2CH2CH2OH)2, Fe(C5H4CO2CH2CH=CH2)2, Fe(C5H4CO2CH3)2, Fe(CpCOOCH3)(CpCOOCH2CH3), and Fe(CpCOOCH2CH3)2 in colon cancer HT-29 and breast cancer MCF-7 cell lines were measured by the MTT biological viability assay and compared to ferrocene and ferrocenium. Fe(C5H4CO2CH2CH=CH2)2 showed the best IC50 values, 180(10)
μM for HT-29 and 190(30)
μM for MCF-7 cell lines, with cytotoxicities similar to ferrocenium.
The cytotoxic data suggest that as we increase the lipophilic character of the functionalized ferrocene,
the cytotoxicity improves approaching to the cytotoxic activity of
ferrocenium.
doi:10.1155/2009/420784
PMCID: PMC2659881
PMID: 19325925
The title dinuclear titanocene, [Ti2(C8H9O)(C18H25Si)2Cl3O], contains one Ti atom tetrahedrally coordinated by two Cl atoms, a bridging O atom and the substituted cyclopentadienyl ligand, and another Ti atom tetrahedrally coordinated by a Cl atom, a bridging O atom, the 2,6-dimethylphenolate ligand and the substituted cyclopentadienyl ligand. The bridging O atom lies on a twofold rotation axis.
doi:10.1107/S1600536811035306
PMCID: PMC3201525
PMID: 22064795
In the centrosymmetric title compound, [Er2(C5H5)4(C4H9O)2], each Er atom is in a distorted tetrahedral coordination environment, coordinated by two cyclopentadienyl rings and two tert-butoxy groups, forming a dimeric complex bridged through the tert-butoxy groups.
doi:10.1107/S1600536808004248
PMCID: PMC2960763
PMID: 21201862
Reaction of the tricarbonyl{η5-[2-(dimethylamino)ethyl]cyclopentadienyl}molybdenum anion and dichloridodiphenylstannane affords the title compound, [MoSn(C6H5)2Cl(C9H14N)(CO)3], which exhibits a four-legged piano-stool geometry with chloridodiphenylstannyl ligands unperturbed by the pendant 2-(dimethylamino)ethyl groups. The Mo—Sn bond length [2.7584 (5) Å] and the distortion of the tetrahedral tin coordination geometry are similar to those observed in related tin-substituted tricarbonylmolybdenum and -tungsten complexes.
doi:10.1107/S1600536809014329
PMCID: PMC2977605
PMID: 21583791
In the title compound, [Fe(C5H5)(C15H11N2O)], the cyclopentadienyl rings are essentially eclipsed, and the dihedral angle between the cyclopentadienyl ring planes is 0.632 (10)°. The Fe atom is slightly closer to the substituted cyclopentadienyl ring, with an Fe–centroid distance of 1.6374 (3) Å [1.6494 (3) Å for the unsubstituted ring]. The amide group is essentially coplanar with the substituted cyclopentadienyl ring, with an N—C(O)—C—C torsion angle of 2.3 (3)°.
doi:10.1107/S1600536811026341
PMCID: PMC3212180
PMID: 22090882
In the crystal structure of the title substituted ferrocene complex, [Fe(C19H18O2P)2], the FeII atom lies on a twofold rotation axis, giving an eclipsed cyclopentadienyl conformation with a ring centroid separation of 3.292 (7) Å and an Fe—C bond-length range of 2.0239 (15)–2.0521 (15) Å. In the ligand, the cyclopentadienyl ring forms dihedral angles of 60.36 (6) and 82.93 (6)° with the two benzene rings of the diphenylphosphine group, while the dihedral angle between the benzene rings is 67.4 (5)°.
doi:10.1107/S1600536812026293
PMCID: PMC3393188
PMID: 22807756
The title compound, [TiW(C5H5)2(C7H5O)Cl(CO)5], consists of two metal centres, with a (tungstenpentacarbonyl)oxyphenylcarbene unit coordinated by a titanocene chloride. The oxycarbene group is nearly planar, with the phenyl ring twisted by an angle of 39.1 (2)° with respect to this plane. One of the cyclopentadienyl rings undergoes an offset face-to-face π–π interaction [3.544 (6) Å] with the symmetry-related cyclopentadienyl ring of a neighbouring molecule.
doi:10.1107/S1600536808036465
PMCID: PMC2960115
PMID: 21581149
Nine amide-functionalized titanocenyls have been synthesized and characterized by spectroscopic and analytical methods and the solid state structure of Cp(CpCO-NH-C6H4-OCF3)TiCl2 was determined by single crystal X-ray diffraction. X-ray analysis of Cp(CpCO-NH-C6H4-OCF3)TiCl2 showed that titanium is in a pseudo tetrahedral geometry and contains a Ti-O(amide) coordination. In principle, Ti-O coordination should provide more hydrolytic stability to the corresponding titanocenyls than titanocene dichloride. The cytotoxic activities of these amide-functionalized titanocenyls on HT-29 colon cancer cell line were determined by MTT assay to elucidate structure-activity relationship. All complexes were more cytotoxic than titanocene dichloride and there is no correlation between the para substituents on the phenyl ring and their cytotoxicities.
doi:10.1016/j.jorganchem.2009.09.016
PMCID: PMC2824910
PMID: 20177431
titanocene dichloride; amide-functionalized titanocenyls; HT-29 colon cancer cell; anticancer
In the title compound, [Zr(C16H13P)Cl2], the geometry at the metal atom is distorted tetrahedral; the Cl—Zr—Cl angle is 101.490 (16)° and the cyclopentadienyl (Cp) centroids subtend an angle of 122.63 (3)° at the Zr atom. The P atom lies 0.474 (3) and 0.496 (3) Å out of the planes of the Cp rings. The C—P—C angle of 91.42 (7)° reflects the pincer effect of the two Cp rings. Three C—H⋯Cl, one C—H⋯P, one C—H⋯π and one Cl⋯P interaction link the molecules to form thick layers parallel to the bc plane.
doi:10.1107/S0108270110004531
PMCID: PMC2855579
PMID: 20203402
In the title compound, [Fe(C20H21NPS)(C17H14PS)]·CH2Cl2, both cyclopentadienyl (Cp) rings constituting the ferrocene unit are substituted by a sulfur-protected diphenylphosphine. One of the Cp ligands is additionally substituted by a dimethylaminomethyl group causing the chirality of the molecule. Surprisingly, although the synthetic procedure yielded the title compound as a racemic mixture, the reported crystal is enantiomerically pure with the R absolute configuration. The dimethylamino group is exo with respect to the Cp ring. Both diphenylthiophosphine groups are trans with respect to the centroid–Fe–centroid direction. Weak intramolecular C—H⋯S and C—H⋯π interactions between symmetry-related molecules are observed. The contribution of the disordered solvent was removed from the refinement using SQUEEZE in PLATON [Spek (2009 ▶). Acta Cryst. D65, 148–155].
doi:10.1107/S1600536812022301
PMCID: PMC3379127
PMID: 22719348
The reactions of bis(cyclopentadienyl)titanium(IV) dichloride with a new class of thiosemicarbazone
(LH2), derived by condensing isatin with different N(4)-substituted thiosemicarbazides, have been studied
and products of type [Cp2Ti(L)] have been isolated. On the basis of various physico-chemical and spectral
studies, five coordinate structures have been assigned to these derivatives. Toxicity studies of titanocene
complexes at tbur different concentrations have been carried out against snail Lymnaea acuminata. The
effect of most potent compounds on the activity of acetylcholinesterase enzyme, which inhibits the activity of
enzyme, possibly by the formation of enzyme-inhibitor complex, was also studied.
doi:10.1155/BCA.2005.151
PMCID: PMC2267095
PMID: 18365096
The reaction of [Pd(MeCN)4](BF4)2 with 2,2′-bipyrimidine (bpm) in MeCN–CHCl3 afforded the title compound, [Pd(C8H6N4)2](BF4)2·C2H3N. The asymmetric unit contains two half complexes, with the PdII atoms both lying on a twofold axis. Each metal atom adopts a tetrahedrally distorted square-planar geometry. In the crystal, [Pd(bpm)2] dications are linked by C—H⋯N hydrogen bonds, forming chains parallel to the b axis. The chains are further linked by C—H⋯F and C—H⋯N interactions involving the tetrafluoroborate anions and acetonitrile molecules. In this way, each chain interacts with six surrounding chains to generate the observed three-dimensional structure.
doi:10.1107/S1600536812041591
PMCID: PMC3515108
PMID: 23284335
In the title complex, [Ru(C7H8)(C10H15)]PF6, the cation lies on a mirror plane and the anion lies on an inversion center. The distance between the Ru atom and the centroid of the benzene ring is 1.706 (5) Å and the distance between the Ru atom and the cyclopentadienyl ring is 1.811 (5) Å. The crystal structure is stabilized by weak C—H⋯F hydrogen bonds. The H atoms of the methyl groups which lie on the mirror plane are disordered over two sites with equal occupancies.
doi:10.1107/S1600536810036299
PMCID: PMC2983397
PMID: 21587411
In the title four-coordinate complex, [Ti(C2H6N)2(C31H28O4)], two symmetry-independent molecules are present in the asymmetric unit. The TiIV atom displays a distorted tetrahedral geometry, with Ti—O bond lengths ranging from 1.805 (3) to 1.830 (3) Å and O—Ti—O ligand bite angles of 100.16 (12) and 101.36 (12)°. The short Ti—N bond distances, ranging from 1.877 (4) to 1.905 (4) Å, indicate strong bonding between the TiIV atom and the dimethylamide ligands.
doi:10.1107/S1600536812002929
PMCID: PMC3274933
PMID: 22346880
In the title complex, [FeZn(C5H5)(C20H14N3)(C12H8N2)](ClO4)2·CH3CN, the ZnII atom is five-coordinated by a tridentate chelating 4′-ferrocenyl-2,2′:6′,2′′-terpyridine (fctpy) ligand and a bidentate chelating 1,10-phenanthroline (phen) ligand in a distorted square-pyramidal environment with a phen N atom located at the apical position [Zn—N = 2.259 (4) Å]. The terpyridyl motif in each fctpy ligand is coplanar, but the cyclopentadienyl ring is twisted by 9.5 (2)° out of coplanarity with each central pyridine. The two cyclopentadienyl rings of the ferrocenyl group are almost eclipsed with a deviation of 4.5 (1)°. In addition, intermolecular π–π interactions [centroid–centroid distance 3.753 (2) Å] are present between the cyclopentadienyl and outer pyridyl rings of the fctpy ligands. One of the perchlorate anions is equally disordered over two positions.
doi:10.1107/S1600536809023939
PMCID: PMC2969299
PMID: 21582748
In the title compound, [FePdBr(C5H5)(C11H10N2)(C26H36NP)]·CH2Cl2, the Pd atom displays a distorted square-planar coordination environment. The five-membered metallacycle adopts an envelope conformation with the coordinated cyclopentadienyl C atom 0.4222 (4) Å out of plane. The dihedral angle between the pyrimidinyl ring and substituted cyclopentadienyl ring is 21.47 (2)°. In the crystal structure, the dimeric unit is generated through the C—H⋯π contact via a crystallographic inversion centre, while the C—H⋯Cl contacts in the dimeric centre link the dichlormethane molecules with the Pd complex molecules.
doi:10.1107/S1600536809012884
PMCID: PMC2977585
PMID: 21583771
The racemic title compound, [FePdCl2(C5H5)(C36H29P2)]·2(CH3)2SO, features a Pd-chelating 1,3-diphosphine, which is substituted at a P-bearing asymmetric C atom by a ferrocenyl group. The PdII atom is in a distorted quadratic coordination by two P and two Cl atoms with bond lengths of 2.2414 (3) and 2.2438 (3) Å for Pd—P, and 2.3452 (3) and 2.3565 (3) Å for Pd—Cl. The conformation of the Pd complex is controlled by an intramolecular slipped π–π stacking interaction between a phenyl and a cyclopentadienyl ring with corresponding C⋯C distances starting at 3.300 (2) Å and the distance between ring centroids being 3.674 (2) Å. The crystal structure is stabilized by C—H⋯Cl and C—H⋯O hydrogen bonds. The (CH3)2SO solvent molecules are arranged in layers parallel to (101) and are linked in pairs by C—H⋯O interactions. One (CH3)2SO molecule is orientationally disordered [occupancy ratio 0.8766 (17):0.1234 (17)] with sulfur in two positions at both sides of its C2O triangle.
doi:10.1107/S160053681103618X
PMCID: PMC3201499
PMID: 22064964
The title compound, [Ru2(C13H15S)2(CO)4], is a centrosymmetric binuclear metal–carbonyl complex containing an Ru—Ru single bond [2.7511 (8) Å]. Each RuI atom is coordinated by two bridging carbonyl ligands, one terminal carbonyl ligand and one η5-cyclopentadienyl group. The complex has a trans conformation and the two cyclopentadienyl ring planes are parallel. The crystal structure involves weak C—H⋯O hydrogen bonds.
doi:10.1107/S1600536809026063
PMCID: PMC2977155
PMID: 21583356
In the cobaltocenium group of the title compound, [AuCo(C5H5)(C17H14P)Cl]PF6, the substituted cyclopentadienyl (Cps) and the unsubstituted cyclopentadienyl (Cp) ring planes are almost parallel, making a dihedral angle of 3.1 (3)°. The C atoms in Cp and Cps are in an eclipsed conformation. The AuI atom is coordinated by a P atom from the diphenylphosphanyl group and a Cl atom in an almost linear arrangement [P—Au—Cl = 178.15–(7)°]. Two hexafluoridophosphate anions are each located on a twofold rotation axis. In the crystal, the complex cations and hexafluoridophosphate anions are linked via intermolecular C—H⋯F hydrogen bonds.
doi:10.1107/S1600536811018769
PMCID: PMC3120450
PMID: 21754675
The title compound, [Fe(C5H5)(C21H24NPS)]I·CHCl3, is built up from a (ferrocenylmethyl)trimethylammonium cation, a iodine anion and a chloroform solvent molecule, all residing in general positions. The N atom of the ammonium group is displaced by 1.182 (2) Å from the plane of the substituted cyclopentadienyl (Cp) ring towards the Fe atom, whereas the C atom attached to the same Cp ring is slightly below this plane by −0.128 (2) Å. These deviations might result from weak agostic interactions between the two H atoms of the CH2 group and the Fe atom.
doi:10.1107/S1600536812046053
PMCID: PMC3588745
PMID: 23468710
19F NMR spectroscopy has proved to be a valuable tool to monitor functionally important conformational transitions of nucleic acids. Here, we present a systematic investigation on the application of 5-fluoro pyrimidines to probe DNA and RNA secondary structures. Oligonucleotides with the propensity to adapt secondary structure equilibria were chosen as model systems and analyzed by 1D 19F and 1H NMR spectroscopy. A comparison with the unmodified analogs revealed that the equilibrium characteristics of the bistable DNA and RNA oligonucleotides were hardly affected upon fluorine substitution at C5 of pyrimidines. This observation was in accordance with UV spectroscopic melting experiments which demonstrated that single 5-fluoro substitutions in double helices lead to comparable thermodynamic stabilities. Thus, 5-fluoro pyrimidine labeling of DNA and RNA can be reliably applied for NMR based nucleic acid secondary structure evaluation. Furthermore, we developed a facile synthetic route towards 5-fluoro cytidine phosphoramidites that enables their convenient site-specific incorporation into oligonucleotides by solid-phase synthesis.
doi:10.1093/nar/gkp862
PMCID: PMC2794194
PMID: 19843610