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Logo of gseBioMed CentralBiomed Central Web Sitesearchsubmit a manuscriptregisterthis journalGenetics, Selection, Evolution : GSEJournal Front Page
 
Volume 44(1);  2012
Research
Optimising multistage dairy cattle breeding schemes including genomic selection using decorrelated or optimum selection indices
Vinzent Börner, Norbert Reinsch
Genet Sel Evol. 2012; 44(1): 1. Published online 2012 January 17. doi: 10.1186/1297-9686-44-1
PMCID:
PMC3292482
Abstract Full Text PDF–605K
The genetic parameters of feed efficiency and its component traits in the turkey (Meleagris gallopavo)
Lindsay A Case, Benjamin J Wood, Stephen P Miller
Genet Sel Evol. 2012; 44(1): 2. Published online 2012 January 23. doi: 10.1186/1297-9686-44-2
PMCID:
PMC3296663
Abstract Full Text PDF–204K
Long-term response to genomic selection: effects of estimation method and reference population structure for different genetic architectures
John WM Bastiaansen, Albart Coster, Mario PL Calus, Johan AM van Arendonk, Henk Bovenhuis
Genet Sel Evol. 2012; 44(1): 3. Published online 2012 January 24. doi: 10.1186/1297-9686-44-3
PMCID:
PMC3305523
Abstract Full Text PDF–365K
The importance of information on relatives for the prediction of genomic breeding values and the implications for the makeup of reference data sets in livestock breeding schemes
Samuel A Clark, John M Hickey, Hans D Daetwyler, Julius HJ van der Werf
Genet Sel Evol. 2012; 44(1): 4. Published online 2012 February 9. doi: 10.1186/1297-9686-44-4
PMCID:
PMC3299588
Abstract Full Text PDF–373K
Genetic diversity, population structure and subdivision of local Balkan pig breeds in Austria, Croatia, Serbia and Bosnia-Herzegovina and its practical value in conservation programs
Thomas Druml, Kresimir Salajpal, Maria Dikic, Miroslav Urosevic, Gertrud Grilz-Seger, Roswitha Baumung
Genet Sel Evol. 2012; 44(1): 5. Published online 2012 March 1. doi: 10.1186/1297-9686-44-5
PMCID:
PMC3311151
Abstract Full Text PDF–3.0M Supplementary Material
Fine mapping of a QTL for ear size on porcine chromosome 5 and identification of high mobility group AT-hook 2 (HMGA2) as a positional candidate gene
Pinghua Li, Shijun Xiao, Na Wei, Zhiyan Zhang, Ruihua Huang, Yueqing Gu, Yuanmei Guo, Jun Ren, Lusheng Huang, Congying Chen
Genet Sel Evol. 2012; 44(1): 6. Published online 2012 March 15. doi: 10.1186/1297-9686-44-6
PMCID:
PMC3337325
Abstract Full Text PDF–590K Supplementary Material
Prediction of a deletion copy number variant by a dense SNP panel
Naveen K Kadri, Patrick D Koks, Theo H E Meuwissen
Genet Sel Evol. 2012; 44(1): 7. Published online 2012 March 23. doi: 10.1186/1297-9686-44-7
PMCID:
PMC3366870
Abstract Full Text PDF–508K Supplementary Material
Comparison on genomic predictions using three GBLUP methods and two single-step blending methods in the Nordic Holstein population
Hongding Gao, Ole F Christensen, Per Madsen, Ulrik S Nielsen, Yuan Zhang, Mogens S Lund, Guosheng Su
Genet Sel Evol. 2012; 44(1): 8. Published online 2012 July 6. doi: 10.1186/1297-9686-44-8
PMCID:
PMC3400441
Abstract Full Text PDF–307K
A phasing and imputation method for pedigreed populations that results in a single-stage genomic evaluation
John M Hickey, Brian P Kinghorn, Bruce Tier, Julius HJ van der Werf, Matthew A Cleveland
Genet Sel Evol. 2012; 44(1): 9. Published online 2012 June 19. doi: 10.1186/1297-9686-44-9
PMCID:
PMC3378429
Abstract Full Text PDF–370K
Genetic evaluation of mastitis liability and recovery through longitudinal analysis of transition probabilities
Jessica Franzén, Daniel Thorburn, Jorge I Urioste, Erling Strandberg
Genet Sel Evol. 2012; 44(1): 10. Published online 2012 April 4. doi: 10.1186/1297-9686-44-10
PMCID:
PMC3384242
Abstract Full Text PDF–340K
Effect of non-random mating on genomic and BLUP selection schemes
Kahsay G Nirea, Anna K Sonesson, John A Woolliams, Theo HE Meuwissen
Genet Sel Evol. 2012; 44(1): 11. Published online 2012 April 11. doi: 10.1186/1297-9686-44-11
PMCID:
PMC3362745
Abstract Full Text PDF–265K
Estimating the effect of SNP genotype on quantitative traits from pooled DNA samples
John M Henshall, Rachel J Hawken, Sonja Dominik, William Barendse
Genet Sel Evol. 2012; 44(1): 12. Published online 2012 April 17. doi: 10.1186/1297-9686-44-12
PMCID:
PMC3353226
Abstract Full Text PDF–1.8M
Association between polymorphism in the FTO gene and growth and carcass traits in pig crosses
Věra Dvořáková, Heinz Bartenschlager, Antonín Stratil, Pavel Horák, Roman Stupka, Jaroslav Čítek, Michal Šprysl, Anna Hrdlicová, Hermann Geldermann
Genet Sel Evol. 2012; 44(1): 13. Published online 2012 April 17. doi: 10.1186/1297-9686-44-13
PMCID:
PMC3369214
Abstract Full Text PDF–276K Supplementary Material
Heritability of cortisol response to confinement stress in European sea bass dicentrarchus labrax
Filip AM Volckaert, Bart Hellemans, Costas Batargias, Bruno Louro, Cécile Massault, Jeroen KJ Van Houdt, Chris Haley, Dirk-Jan de Koning, Adelino VM Canario
Genet Sel Evol. 2012; 44(1): 15. Published online 2012 June 19. doi: 10.1186/1297-9686-44-15
PMCID:
PMC3378454
Abstract Full Text PDF–353K Supplementary Material
Estimation of heritability from limited family data using genome-wide identity-by-descent sharing
Jørgen Ødegård, Theo HE Meuwissen
Genet Sel Evol. 2012; 44(1): 16. Published online 2012 May 8. doi: 10.1186/1297-9686-44-16
PMCID:
PMC3378432
Abstract Full Text PDF–1.0M
Genetic diversity and networks of exchange: a combined approach to assess intra-breed diversity
Jean-François Dumasy, Christel Daniaux, Isabelle Donnay, Philippe V Baret
Genet Sel Evol. 2012; 44(1): 17. Published online 2012 May 23. doi: 10.1186/1297-9686-44-17
PMCID:
PMC3406966
Abstract Full Text PDF–1.5M Supplementary Material
Estimation of (co)variances for genomic regions of flexible sizes: application to complex infectious udder diseases in dairy cattle
Lars P Sørensen, Luc Janss, Per Madsen, Thomas Mark, Mogens S Lund
Genet Sel Evol. 2012; 44(1): 18. Published online 2012 July 6. doi: 10.1186/1297-9686-44-18
PMCID:
PMC3390905
Abstract Full Text PDF–827K
Genetic and environmental heterogeneity of residual variance of weight traits in Nellore beef cattle
Haroldo HR Neves, Roberto Carvalheiro, Sandra A Queiroz
Genet Sel Evol. 2012; 44(1): 19. Published online 2012 July 4. doi: 10.1186/1297-9686-44-19
PMCID:
PMC3390267
Abstract Full Text PDF–296K
Genetic parameters of infectious bovine keratoconjunctivitis and its relationship with weight and parasite infestations in Australian tropical Bos taurus cattle
Abdirahman A Ali, Christopher J O’Neill, Peter C Thomson, Haja N Kadarmideen
Genet Sel Evol. 2012; 44(1): 22. Published online 2012 July 27. doi: 10.1186/1297-9686-44-22
PMCID:
PMC3517348
Abstract Full Text PDF–2.1M
Evaluating alternate models to estimate genetic parameters of calving traits in United Kingdom Holstein-Friesian dairy cattle
Sophie A E Eaglen, Mike P Coffey, John A Woolliams, Eileen Wall
Genet Sel Evol. 2012; 44(1): 23. Published online 2012 July 28. doi: 10.1186/1297-9686-44-23
PMCID:
PMC3468354
Abstract Full Text PDF–992K Supplementary Material
Effectiveness of genomic prediction on milk flow traits in dairy cattle
Kent A Gray, Joseph P Cassady, Yijian Huang, Christian Maltecca
Genet Sel Evol. 2012; 44(1): 24. Published online 2012 July 30. doi: 10.1186/1297-9686-44-24
PMCID:
PMC3507773
Abstract Full Text PDF–274K Supplementary Material
Assessment of alternative genotyping strategies to maximize imputation accuracy at minimal cost
Yijian Huang, John M Hickey, Matthew A Cleveland, Christian Maltecca
Genet Sel Evol. 2012; 44(1): 25. Published online 2012 July 31. doi: 10.1186/1297-9686-44-25
PMCID:
PMC3436735
Abstract Full Text PDF–205K Supplementary Material
Response to genomic selection: The Bulmer effect and the potential of genomic selection when the number of phenotypic records is limiting
Elizabeth M Van Grevenhof, Johan AM Van Arendonk, Piter Bijma
Genet Sel Evol. 2012; 44(1): 26. Published online 2012 August 3. doi: 10.1186/1297-9686-44-26
PMCID:
PMC3441475
Abstract Full Text PDF–926K
Genomic selection requires genomic control of inbreeding
Anna K Sonesson, John A Woolliams, Theo HE Meuwissen
Genet Sel Evol. 2012; 44(1): 27. Published online 2012 August 16. doi: 10.1186/1297-9686-44-27
PMCID:
PMC3522025
Abstract Full Text PDF–564K
The importance of identity-by-state information for the accuracy of genomic selection
Tu Luan, John A Woolliams, Jørgen Ødegård, Marlies Dolezal, Sergio I Roman-Ponce, Alessandro Bagnato, Theo HE Meuwissen
Genet Sel Evol. 2012; 44(1): 28. Published online 2012 August 31. doi: 10.1186/1297-9686-44-28
PMCID:
PMC3517337
Abstract Full Text PDF–250K
Parallel Markov chain Monte Carlo - bridging the gap to high-performance Bayesian computation in animal breeding and genetics
Xiao-Lin Wu, Chuanyu Sun, Timothy M Beissinger, Guilherme JM Rosa, Kent A Weigel, Natalia de Leon Gatti, Daniel Gianola
Genet Sel Evol. 2012; 44(1): 29. Published online 2012 September 25. doi: 10.1186/1297-9686-44-29
PMCID:
PMC3517397
Abstract Full Text PDF–1.7M
Strategies for implementing genomic selection in family-based aquaculture breeding schemes: double haploid sib test populations
Kahsay G Nirea, Anna K Sonesson, John A Woolliams, Theo HE Meuwissen
Genet Sel Evol. 2012; 44(1): 30. Published online 2012 October 30. doi: 10.1186/1297-9686-44-30
PMCID:
PMC3506447
Abstract Full Text PDF–323K
Genome-wide association study of insect bite hypersensitivity in two horse populations in the Netherlands
Anouk Schurink, Anna Wolc, Bart J Ducro, Klaas Frankena, Dorian J Garrick, Jack CM Dekkers, Johan AM van Arendonk
Genet Sel Evol. 2012; 44(1): 31. Published online 2012 October 30. doi: 10.1186/1297-9686-44-31
PMCID:
PMC3524047
Abstract Full Text PDF–489K
Accuracy of pedigree and genomic predictions of carcass and novel meat quality traits in multi-breed sheep data assessed by cross-validation
Hans D Daetwyler, Andrew A Swan, Julius HJ van der Werf, Ben J Hayes
Genet Sel Evol. 2012; 44(1): 33. Published online 2012 November 12. doi: 10.1186/1297-9686-44-33
PMCID:
PMC3506471
Abstract Full Text PDF–473K Supplementary Material
Modelling and estimation of genotype by environment interactions for production traits in French dairy cattle
Bérénice Huquet, Hélène Leclerc, Vincent Ducrocq
Genet Sel Evol. 2012; 44(1): 35. Published online 2012 November 26. doi: 10.1186/1297-9686-44-35
PMCID:
PMC3548741
Abstract Full Text PDF–840K
Compatibility of pedigree-based and marker-based relationship matrices for single-step genetic evaluation
Ole F Christensen
Genet Sel Evol. 2012; 44(1): 37. Published online 2012 December 3. doi: 10.1186/1297-9686-44-37
PMCID:
PMC3549765
Abstract Full Text PDF–304K
Accuracy of direct genomic breeding values for nationally evaluated traits in US Limousin and Simmental beef cattle
Mahdi Saatchi, Robert D Schnabel, Megan M Rolf, Jeremy F Taylor, Dorian J Garrick
Genet Sel Evol. 2012; 44(1): 38. Published online 2012 December 7. doi: 10.1186/1297-9686-44-38
PMCID:
PMC3536607
Abstract Full Text PDF–250K Supplementary Material
Joint genomic evaluation of French dairy cattle breeds using multiple-trait models
Sofiene Karoui, María Jesús Carabaño, Clara Díaz, Andrés Legarra
Genet Sel Evol. 2012; 44(1): 39. Published online 2012 December 7. doi: 10.1186/1297-9686-44-39
PMCID:
PMC3548724
Abstract Full Text PDF–631K
Review
Ancient DNA studies: new perspectives on old samples
Ermanno Rizzi, Martina Lari, Elena Gigli, Gianluca De Bellis, David Caramelli
Genet Sel Evol. 2012; 44(1): 21. Published online 2012 July 6. doi: 10.1186/1297-9686-44-21
Correction in:
Genet Sel Evol. 2013; 45(1): 4.
PMCID:
PMC3390907
Abstract Full Text PDF–1.1M Supplementary Material Correction
Short Communication
An accurate formula to calculate exclusion power of marker sets in parentage assignment
Marc Vandeputte
Genet Sel Evol. 2012; 44(1): 36. Published online 2012 December 3. doi: 10.1186/1297-9686-44-36
PMCID:
PMC3523974
Abstract Full Text PDF–231K
Software
Simulating a base population in honey bee for molecular genetic studies
Pooja Gupta, Tim Conrad, Andreas Spötter, Norbert Reinsch, Kaspar Bienefeld
Genet Sel Evol. 2012; 44(1): 14. Published online 2012 June 27. doi: 10.1186/1297-9686-44-14
PMCID:
PMC3384461
Abstract Full Text PDF–450K
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