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Volume 78(2);  January 2012
Biotechnology
Electron Donors Supporting Growth and Electroactivity of Geobacter sulfurreducens Anode Biofilms
Allison M. Speers, Gemma Reguera
Appl Environ Microbiol. 2012 January; 78(2): 437–444. doi: 10.1128/AEM.06782-11
PMCID:
PMC3255729
Abstract Full Text PDF–1.4M
Development of a New Strategy for Production of Medium-Chain-Length Polyhydroxyalkanoates by Recombinant Escherichia coli via Inexpensive Non-Fatty Acid Feedstocks
Qin Wang, Ryan C. Tappel, Chengjun Zhu, Christopher T. Nomura
Appl Environ Microbiol. 2012 January; 78(2): 519–527. doi: 10.1128/AEM.07020-11
PMCID:
PMC3255744
Abstract Full Text PDF–705K
Production, Secretion, and Cell Surface Display of Recombinant Sporosarcina ureae S-Layer Fusion Proteins in Bacillus megaterium
Denise Knobloch, Kai Ostermann, Gerhard Rödel
Appl Environ Microbiol. 2012 January; 78(2): 560–567. doi: 10.1128/AEM.06127-11
PMCID:
PMC3255725
Abstract Full Text PDF–8.2M Supplementary Material
Controlled Gene Expression in Bifidobacteria by Use of a Bile-Responsive Element
Lorena Ruiz, Pablo Álvarez-Martín, Baltasar Mayo, Clara G. de los Reyes-Gavilán, Miguel Gueimonde, Abelardo Margolles
Appl Environ Microbiol. 2012 January; 78(2): 581–585. doi: 10.1128/AEM.06611-11
PMCID:
PMC3255758
Abstract Full Text PDF–1.1M Supplementary Material
Physiology
Streptomycin-Induced Expression in Bacillus subtilis of YtnP, a Lactonase-Homologous Protein That Inhibits Development and Streptomycin Production in Streptomyces griseus
Johannes Schneider, Ana Yepes, Juan C. Garcia-Betancur, Isa Westedt, Benjamin Mielich, Daniel López
Appl Environ Microbiol. 2012 January; 78(2): 599–603. doi: 10.1128/AEM.06992-11
PMCID:
PMC3255736
Abstract Full Text PDF–863K Supplementary Material
Genetics and Molecular Biology
Salivaricin D, a Novel Intrinsically Trypsin-Resistant Lantibiotic from Streptococcus salivarius 5M6c Isolated from a Healthy Infant
Dagim Jirata Birri, Dag Anders Brede, Ingolf F. Nes
Appl Environ Microbiol. 2012 January; 78(2): 402–410. doi: 10.1128/AEM.06588-11
PMCID:
PMC3255740
Abstract Full Text PDF–1.4M
Molecular Survey and Genetic Identification of Anaplasma Species in Goats from Central and Southern China
Zhijie Liu, Miling Ma, Zhaowen Wang, Jing Wang, Yulv Peng, Youquan Li, Guiquan Guan, Jianxun Luo, Hong Yin
Appl Environ Microbiol. 2012 January; 78(2): 464–470. doi: 10.1128/AEM.06848-11
PMCID:
PMC3255723
Abstract Full Text PDF–838K
Acinetobacter Insertion Sequence ISAba11 Belongs to a Novel Family That Encodes Transposases with a Signature HHEK Motif
Barbara Rieck, David S. Tourigny, Marialuisa Crosatti, Ralf Schmid, Mandira Kochar, Ewan M. Harrison, Hong-Yu Ou, Jane F. Turton, Kumar Rajakumar
Appl Environ Microbiol. 2012 January; 78(2): 471–480. doi: 10.1128/AEM.05663-11
PMCID:
PMC3255748
Abstract Full Text PDF–1.5M Supplementary Material
Characterization and Functional Analyses of R-Specific Enoyl Coenzyme A Hydratases in Polyhydroxyalkanoate-Producing Ralstonia eutropha
Yui Kawashima, Wen Cheng, Jun Mifune, Izumi Orita, Satoshi Nakamura, Toshiaki Fukui
Appl Environ Microbiol. 2012 January; 78(2): 493–502. doi: 10.1128/AEM.06937-11
PMCID:
PMC3255746
Abstract Full Text PDF–1.2M
Development of a Simvastatin Selection Marker for a Hyperthermophilic Acidophile, Sulfolobus islandicus
Tao Zheng, Qihong Huang, Changyi Zhang, Jinfeng Ni, Qunxin She, Yulong Shen
Appl Environ Microbiol. 2012 January; 78(2): 568–574. doi: 10.1128/AEM.06095-11
PMCID:
PMC3255719
Abstract Full Text PDF–788K
Public Health Microbiology
Methicillin-Resistant Coagulase-Negative Staphylococci on Pig Farms as a Reservoir of Heterogeneous Staphylococcal Cassette Chromosome mec Elements
Pawel Tulinski, Ad C. Fluit, Jaap A. Wagenaar, Dik Mevius, Lucy van de Vijver, Birgitta Duim
Appl Environ Microbiol. 2012 January; 78(2): 299–304. doi: 10.1128/AEM.05594-11
PMCID:
PMC3255757
Abstract Full Text PDF–558K
Diurnal Variation in Enterococcus Species Composition in Polluted Ocean Water and a Potential Role for the Enterococcal Carotenoid in Protection against Photoinactivation
Peter A. Maraccini, Donna M. Ferguson, Alexandria B. Boehm
Appl Environ Microbiol. 2012 January; 78(2): 305–310. doi: 10.1128/AEM.06821-11
PMCID:
PMC3255750
Abstract Full Text PDF–441K
Colonization Kinetics of Different Methicillin-Resistant Staphylococcus aureus Sequence Types in Pigs and Host Susceptibilities
István Szabó, Britta Beck, Anika Friese, Alexandra Fetsch, Bernd-Alois Tenhagen, Uwe Roesler
Appl Environ Microbiol. 2012 January; 78(2): 541–548. doi: 10.1128/AEM.05327-11
PMCID:
PMC3255747
Abstract Full Text PDF–956K
Daphnia magna, a Host for Evaluation of Bacterial Virulence
Marion Le Coadic, Marianne Simon, Anna Marchetti, Dieter Ebert, Pierre Cosson
Appl Environ Microbiol. 2012 January; 78(2): 593–595. doi: 10.1128/AEM.06278-11
PMCID:
PMC3255754
Abstract Full Text PDF–466K
Environmental Microbiology
Molecular Diversity of the Syndinean Genus Euduboscquella Based on Single-Cell PCR Analysis
Tsvetan R. Bachvaroff, Sunju Kim, Laure Guillou, Charles F. Delwiche, D. Wayne Coats
Appl Environ Microbiol. 2012 January; 78(2): 334–345. doi: 10.1128/AEM.06678-11
PMCID:
PMC3255722
Abstract Full Text PDF–2.1M Supplementary Material
Factors Driving Potential Ammonia Oxidation in Canadian Arctic Ecosystems: Does Spatial Scale Matter?
Samiran Banerjee, Steven D. Siciliano
Appl Environ Microbiol. 2012 January; 78(2): 346–353. doi: 10.1128/AEM.06132-11
PMCID:
PMC3255738
Abstract Full Text PDF–2.5M Supplementary Material
Isolation of Bacteria Capable of Growth with 2-Methylisoborneol and Geosmin as the Sole Carbon and Energy Sources
Lior Guttman, Jaap van Rijn
Appl Environ Microbiol. 2012 January; 78(2): 363–370. doi: 10.1128/AEM.06333-11
PMCID:
PMC3255726
Abstract Full Text PDF–1.3M Supplementary Material
Application of a Receptor-Binding Capture Quantitative Reverse Transcription-PCR Assay To Concentrate Human Norovirus from Sewage and To Study the Distribution and Stability of the Virus
Peng Tian, David Yang, Liangwen Pan, Robert Mandrell
Appl Environ Microbiol. 2012 January; 78(2): 429–436. doi: 10.1128/AEM.06875-11
PMCID:
PMC3255735
Abstract Full Text PDF–262K
Responses of Methanogen mcrA Genes and Their Transcripts to an Alternate Dry/Wet Cycle of Paddy Field Soil
Ke Ma, Ralf Conrad, Yahai Lu
Appl Environ Microbiol. 2012 January; 78(2): 445–454. doi: 10.1128/AEM.06934-11
PMCID:
PMC3255761
Abstract Full Text PDF–1.7M Supplementary Material
Efficient Biostimulation of Native and Introduced Quorum-Quenching Rhodococcus erythropolis Populations Is Revealed by a Combination of Analytical Chemistry, Microbiology, and Pyrosequencing
Amélie Cirou, Samuel Mondy, Shu An, Amélie Charrier, Amélie Sarrazin, Odile Thoison, Michael DuBow, Denis Faure
Appl Environ Microbiol. 2012 January; 78(2): 481–492. doi: 10.1128/AEM.06159-11
PMCID:
PMC3255727
Abstract Full Text PDF–2.0M Supplementary Material
Metagenomic Analysis of Stress Genes in Microbial Mat Communities from Antarctica and the High Arctic
Thibault Varin, Connie Lovejoy, Anne D. Jungblut, Warwick F. Vincent, Jacques Corbeil
Appl Environ Microbiol. 2012 January; 78(2): 549–559. doi: 10.1128/AEM.06354-11
PMCID:
PMC3255749
Abstract Full Text PDF–915K Supplementary Material
Characterization of Streptomyces padanus JAU4234, a Producer of Actinomycin X2, Fungichromin, and a New Polyene Macrolide Antibiotic
Zhi-Qiang Xiong, Zhi-Ping Zhang, Jiang-Huai Li, Sai-Jin Wei, Guo-Quan Tu
Appl Environ Microbiol. 2012 January; 78(2): 589–592. doi: 10.1128/AEM.06561-11
PMCID:
PMC3255745
Abstract Full Text PDF–611K Supplementary Material
Enterococcus faecium of the vanA Genotype in Rural Drinking Water, Effluent, and the Aqueous Environment
Dearbháile Morris, Sandra Galvin, Fiona Boyle, Paul Hickey, Martina Mulligan, Martin Cormican
Appl Environ Microbiol. 2012 January; 78(2): 596–598. doi: 10.1128/AEM.06636-11
PMCID:
PMC3255720
Abstract Full Text PDF–314K
Identification and Characterization of a Xyloglucan-Specific Family 74 Glycosyl Hydrolase from Streptomyces coelicolor A3(2)
Bolormaa Enkhbaatar, Uyangaa Temuujin, Ju-Hyeon Lim, Won-Jae Chi, Yong-Keun Chang, Soon-Kwang Hong
Appl Environ Microbiol. 2012 January; 78(2): 607–611. doi: 10.1128/AEM.06482-11
PMCID:
PMC3255728
Abstract Full Text PDF–509K
Microbial Ecology
Abundance and Composition of Epiphytic Bacterial and Archaeal Ammonia Oxidizers of Marine Red and Brown Macroalgae
Rosalia Trias, Arantzazu García-Lledó, Noemí Sánchez, José Luis López-Jurado, Sara Hallin, Lluís Bañeras
Appl Environ Microbiol. 2012 January; 78(2): 318–325. doi: 10.1128/AEM.05904-11
PMCID:
PMC3255731
Abstract Full Text PDF–1.3M Supplementary Material
Natural Niche for Organohalide-Respiring Chloroflexi
Mark J. Krzmarzick, Benjamin B. Crary, Jevon J. Harding, Oyenike O. Oyerinde, Alessandra C. Leri, Satish C. B. Myneni, Paige J. Novak
Appl Environ Microbiol. 2012 January; 78(2): 393–401. doi: 10.1128/AEM.06510-11
PMCID:
PMC3255752
Abstract Full Text PDF–456K Supplementary Material
Indole Production Promotes Escherichia coli Mixed-Culture Growth with Pseudomonas aeruginosa by Inhibiting Quorum Signaling
Weihua Chu, Tesfalem R. Zere, Mary M. Weber, Thomas K. Wood, Marvin Whiteley, Benjamin Hidalgo-Romano, Ernesto Valenzuela, Jr., Robert J. C. McLean
Appl Environ Microbiol. 2012 January; 78(2): 411–419. doi: 10.1128/AEM.06396-11
PMCID:
PMC3255741
Abstract Full Text PDF–454K Supplementary Material
Cultured Representatives of Two Major Phylogroups of Human Colonic Faecalibacterium prausnitzii Can Utilize Pectin, Uronic Acids, and Host-Derived Substrates for Growth
Mireia Lopez-Siles, Tanweer M. Khan, Sylvia H. Duncan, Hermie J. M. Harmsen, L. Jesús Garcia-Gil, Harry J. Flint
Appl Environ Microbiol. 2012 January; 78(2): 420–428. doi: 10.1128/AEM.06858-11
PMCID:
PMC3255724
Abstract Full Text PDF–924K Supplementary Material
Genetic Markers for Rapid PCR-Based Identification of Gull, Canada Goose, Duck, and Chicken Fecal Contamination in Water
Hyatt C. Green, Linda K. Dick, Brent Gilpin, Mansour Samadpour, Katharine G. Field
Appl Environ Microbiol. 2012 January; 78(2): 503–510. doi: 10.1128/AEM.05734-11
PMCID:
PMC3255751
Abstract Full Text PDF–784K
Characterization of Phascolarctobacterium succinatutens sp. nov., an Asaccharolytic, Succinate-Utilizing Bacterium Isolated from Human Feces
Yohei Watanabe, Fumiko Nagai, Masami Morotomi
Appl Environ Microbiol. 2012 January; 78(2): 511–518. doi: 10.1128/AEM.06035-11
PMCID:
PMC3255759
Abstract Full Text PDF–933K
Food Microbiology
Cow Teat Skin, a Potential Source of Diverse Microbial Populations for Cheese Production
Isabelle Verdier-Metz, Geneviève Gagne, Stéphanie Bornes, Françoise Monsallier, Philippe Veisseire, Céline Delbès-Paus, Marie-Christine Montel
Appl Environ Microbiol. 2012 January; 78(2): 326–333. doi: 10.1128/AEM.06229-11
PMCID:
PMC3255753
Abstract Full Text PDF–166K Supplementary Material
Association of Constitutive Hyperphosphorylation of Hsf1p with a Defective Ethanol Stress Response in Saccharomyces cerevisiae Sake Yeast Strains
Chiemi Noguchi, Daisuke Watanabe, Yan Zhou, Takeshi Akao, Hitoshi Shimoi
Appl Environ Microbiol. 2012 January; 78(2): 385–392. doi: 10.1128/AEM.06341-11
PMCID:
PMC3255739
Abstract Full Text PDF–1.0M
Distinct Transcriptional Profiles and Phenotypes Exhibited by Escherichia coli O157:H7 Isolates Related to the 2006 Spinach-Associated Outbreak
Craig T. Parker, Jennifer L. Kyle, Steven Huynh, Michelle Q. Carter, Maria T. Brandl, Robert E. Mandrell
Appl Environ Microbiol. 2012 January; 78(2): 455–463. doi: 10.1128/AEM.06251-11
PMCID:
PMC3255721
Abstract Full Text PDF–813K Supplementary Material
Preliminary Safety Evaluation of a New Bacteroides xylanisolvens Isolate
Philippe Ulsemer, Kawe Toutounian, Jens Schmidt, Uwe Karsten, Steffen Goletz
Appl Environ Microbiol. 2012 January; 78(2): 528–535. doi: 10.1128/AEM.06641-11
PMCID:
PMC3255732
Abstract Full Text PDF–500K
Effect of Honey on Streptococcus mutans Growth and Biofilm Formation
Hani M. Nassar, Mingyun Li, Richard L. Gregory
Appl Environ Microbiol. 2012 January; 78(2): 536–540. doi: 10.1128/AEM.05538-11
PMCID:
PMC3255743
Abstract Full Text PDF–850K
Plant Microbiology
Type Three Effector Gene Distribution and Sequence Analysis Provide New Insights into the Pathogenicity of Plant-Pathogenic Xanthomonas arboricola
Ahmed Hajri, Joël F. Pothier, Marion Fischer-Le Saux, Sophie Bonneau, Stéphane Poussier, Tristan Boureau, Brion Duffy, Charles Manceau
Appl Environ Microbiol. 2012 January; 78(2): 371–384. doi: 10.1128/AEM.06119-11
PMCID:
PMC3255760
Abstract Full Text PDF–1.5M
Casuarina Root Exudates Alter the Physiology, Surface Properties, and Plant Infectivity of Frankia sp. Strain CcI3
Nicholas J. Beauchemin, Teal Furnholm, Julien Lavenus, Sergio Svistoonoff, Patrick Doumas, Didier Bogusz, Laurent Laplaze, Louis S. Tisa
Appl Environ Microbiol. 2012 January; 78(2): 575–580. doi: 10.1128/AEM.06183-11
PMCID:
PMC3255737
Abstract Full Text PDF–1.2M
Invertebrate Microbiology
Disease Dynamics and Persistence of Musca domestica Salivary Gland Hypertrophy Virus Infections in Laboratory House Fly (Musca domestica) Populations
Verena-Ulrike Lietze, Christopher J. Geden, Melissa A. Doyle, Drion G. Boucias
Appl Environ Microbiol. 2012 January; 78(2): 311–317. doi: 10.1128/AEM.06500-11
PMCID:
PMC3255755
Abstract Full Text PDF–251K
Differential Protection of Cry1Fa Toxin against Spodoptera frugiperda Larval Gut Proteases by Cadherin Orthologs Correlates with Increased Synergism
Khalidur Rahman, Mohd Amir F. Abdullah, Suresh Ambati, Milton D. Taylor, Michael J. Adang
Appl Environ Microbiol. 2012 January; 78(2): 354–362. doi: 10.1128/AEM.06212-11
PMCID:
PMC3255730
Abstract Full Text PDF–1.9M Supplementary Material
Methods
Bacterial Whole-Cell Biosensor for Glutamine with Applications for Quantifying and Visualizing Glutamine in Plants
Michael J. Tessaro, Sameh S. M. Soliman, Manish N. Raizada
Appl Environ Microbiol. 2012 January; 78(2): 604–606. doi: 10.1128/AEM.05261-11
PMCID:
PMC3255742
Abstract Full Text PDF–412K Supplementary Material
Biodegradation
Vanillin Catabolism in Rhodococcus jostii RHA1
Hao-Ping Chen, Mindy Chow, Chi-Chun Liu, Alice Lau, Jie Liu, Lindsay D. Eltis
Appl Environ Microbiol. 2012 January; 78(2): 586–588. doi: 10.1128/AEM.06876-11
PMCID:
PMC3255756
Abstract Full Text PDF–207K Supplementary Material
Erratum
Barcoded Primers Used in Multiplex Amplicon Pyrosequencing Bias Amplification
David Berry, Karim Ben Mahfoudh, Michael Wagner, Alexander Loy
Appl Environ Microbiol. 2012 January; 78(2): 612. doi: 10.1128/AEM.07448-11
Corrects:
Appl Environ Microbiol. 2011 November; 77(21): 7846–7849.
PMCID:
PMC3255734
Correction PDF–58K Original Article
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