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Volume 66(Pt 6);  June 1, 2010
Structural Communications
Simona Fermani, Francesca Sparla, Lucia Marri, Anton Thumiger, Paolo Pupillo, Giuseppe Falini, Paolo Trost
The crystal structure of the photosynthetic A 4 isoform of glyceraldehyde-3-phosphate dehydrogenase from the model plant A. thaliana has been solved at 2.6 Å resolution. The tetrameric structure includes four molecules of NAD and eight sulfate ions occupying the P sites involved in catalysis.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 621–626. Published online May 25, 2010. doi: 10.1107/S1744309110013527
PMCID:
PMC2882757
Shabir Najmudin, Sofia R. Pauleta, Isabel Moura, Maria J. Romão
A high-resolution structure of P. pantrotrophus pseudoazurin is reported at 1.4 Å resolution, together with secondary-structure-based sequence alignment of the type 1 copper protein family.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 627–635. Published online May 25, 2010. doi: 10.1107/S1744309110013989
PMCID:
PMC2882758
Yi-Che Su, Ko-Hsin Chin, Hui-Chih Hung, Gwan-Han Shen, Andrew H.-J. Wang, Shan-Ho Chou
The crystal structure of FeoA from Stenotrophomonas maltophilia has been determined to a resolution of 1.7 Å using an Se single-wavelength anomalous dispersion (Se-SAD) approach and revealed a unique dimer cross-linked by two zinc ions and six chloride ions.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 636–642. Published online May 25, 2010. doi: 10.1107/S1744309110013941
PMCID:
PMC2882759
Jean Jakoncic, Benjamin Sondgeroth, Nick Carpino, Nicolas Nassar
The crystal structure of the phosphatase domain of Sts-1 at pH 4.6 complexed with sulfate has been determined to 1.35 Å resolution.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 643–647. Published online May 25, 2010. doi: 10.1107/S1744309110014259
PMCID:
PMC2882760
Sachin Wakadkar, Siska Hermawan, Dieter Jendrossek, Anastassios C. Papageorgiou
The crystal structure of PhaZ7 depolymerase determined at atomic (1.2 Å) resolution in the presence of PMSF reveals a preformed serine protease catalytic triad and details of the architecture of the active site.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 648–654. Published online May 25, 2010. doi: 10.1107/S174430911001434X
PMCID:
PMC2882761
Crystallization Communications
A. V. Lyashenko, E. Y. Bezsudnova, V. M. Gumerov, A. A. Lashkov, A. V. Mardanov, A. M. Mikhailov, K. M. Polyakov, V. O. Popov, N. V. Ravin, K. G. Skryabin, V. K. Zabolotniy, T. N. Stekhanova, M. V. Kovalchuk
The expression, purification and crystallization of a thermostable short-chain alcohol dehydrogenase from the archaeon T. sibiricus is reported.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 655–657. Published online May 26, 2010. doi: 10.1107/S1744309110002654
PMCID:
PMC2882762
Muhammad Bashir Khan, Björn Sjöblom, Rudolf J. Schweyen, Kristina Djinović-Carugo
Soluble N-terminal domain of yeast magnesium ion transporter Mrs2 was overexpressed in E. coli, purified, crystallized and X-ray diffraction data collected to 1.83 Å resolution.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 658–661. Published online May 26, 2010. doi: 10.1107/S1744309110012212
PMCID:
PMC2882763
Young-Ho Yoon, Fumihiro Kawai, Kanako Sugiyama, Sam-Yong Park, Takuya Nihira, Sun-Uk Choi, Yong-Il Hwang
A DNA-binding protein from S. virginiae was crystallized using the hanging-drop vapour-diffusion method. The crystals diffracted to approximately 3.0 Å resolution.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 662–664. Published online May 26, 2010. doi: 10.1107/S1744309110009930
PMCID:
PMC2882764
Isabelle Petit-Haertlein, Matthew P. Blakeley, Eduardo Howard, Isabelle Hazemann, Andre Mitschler, Alberto Podjarny, Michael Haertlein
Deuterated type III antifreeze protein specifically hydrogen reverse-labelled in the methyl groups of leucine and valine residues has been expressed, purified and crystallized. Preliminary neutron data collection showed diffraction to 1.80 Å resolution from a 0.23 mm3 crystal.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 665–669. Published online May 26, 2010. doi: 10.1107/S1744309110012352
PMCID:
PMC2882765
Noella Silva-Martin, Rafael Molina, Ivan Angulo, José M. Mancheño, Pedro García, Juan A. Hermoso
The catalytic module of endolysin from the phage Cp-7 was crystallized using the vapour-diffusion method. Native data were collected to 2.4 Å resolution.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 670–673. Published online May 26, 2010. doi: 10.1107/S1744309110006718
PMCID:
PMC2882766
Xiaohang Tong, Yanlin Ma, Xuemei Li
The C-terminal domain of mouse hepatitis virus nucleocapsid protein has been overexpressed in E. coli, purified and crystallized. The crystal belonged to space group P422, with unit-cell parameters a = 66.6, c = 50.8 Å, and diffracted to 2.20 Å resolution.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 674–676. Published online May 26, 2010. doi: 10.1107/S1744309110012492
PMCID:
PMC2882767
Thi-Ngoc-Thanh Doan, Ponnandy Prabhu, Jin-Kwang Kim, Yeh-Jin Ahn, Sampath Natarajan, Lin-Woo Kang, Geon Tae Park, Sang-Boem Lim, Jung-Kul Lee
l-Rhamnose isomerase (l-RhI) from B. halodurans has been purified and crystallized. The crystals of l-RhI belonged to the monoclinic space group P21, with unit-cell parameters a = 83.2, b = 164.9, c = 92.0 Å, β = 116.0°, and diffracted to 2.5 Å resolution.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 677–680. Published online May 26, 2010. doi: 10.1107/S174430911001256X
PMCID:
PMC2882768
Ning Zhang, Xiaoming Ren, Deyu Zhu, Defeng Li, Dacheng Wang
Different forms of the magnesium-ion transporter CorC have been crystallized; crystallization was affected by nucleotides and magnesium ions.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 681–683. Published online May 26, 2010. doi: 10.1107/S1744309110012613
PMCID:
PMC2882769
Andreas Zurbriggen, Philipp Schneider, Priska Bähler, Ulrich Baumann, Bernhard Erni
The transporters of the bacterial phosphotransferase system mediate the uptake of carbohydrates with concomitant phosphorylation. Good-quality crystals have been obtained of the membrane-spanning EIICGlc domain of the E. coli glucose transporter.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 684–688. Published online May 26, 2010. doi: 10.1107/S1744309110013102
PMCID:
PMC2882770
Daisy W. Leung, Dominika Borek, Mina Farahbakhsh, Parameshwaran Ramanan, Jay C. Nix, Tianjiao Wang, Kathleen C. Prins, Zbyszek Otwinowski, Richard B. Honzatko, Luke A. Helgeson, Christopher F. Basler, Gaya K. Amarasinghe
Three mutant forms of Ebola VP35 interferon inhibitory domain were crystallized in three different space groups.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 689–692. Published online May 27, 2010. doi: 10.1107/S1744309110013266
PMCID:
PMC2882771
Klaus Piontek, René Ullrich, Christiane Liers, Kay Diederichs, Dietmar A. Plattner, Martin Hofrichter
The glycosylated fungal haem-thiolate peroxygenase AaPII was crystallized in three different forms from a charge-heterogeneous protein sample. Structure solution of the 45 kDa protein was achieved with SAD utilizing the haem iron and the structure was determined at 2.2 Å resolution.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 693–698. Published online May 27, 2010. doi: 10.1107/S1744309110013515
PMCID:
PMC2882772
Juliana I. dos Santos, Norival A. Santos-Filho, Andreimar M. Soares, Marcos R. M. Fontes
PrTX-I, a noncatalytic and myotoxic Lys49-phospholipase A2 from B. pirajai venom, was cocrystallized with the inhibitor rosmarinic acid from C. verbenacea. The crystals diffracted X-rays to 1.8 Å resolution and the structure was solved, indicating a remarkable electronic density for the ligand at the entrance to the hydrophobic channel.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 699–701. Published online May 27, 2010. doi: 10.1107/S1744309110013709
PMCID:
PMC2882773
Pravien D. Abeywickrema, Sangita B. Patel, Noel J. Byrne, Ronald E. Diehl, Dawn L. Hall, Rachael E. Ford, Keith W. Rickert, John C. Reid, Jennifer M. Shipman, Wayne M. Geissler, Kelly D. Pryor, Ranabir SinhaRoy, Stephen M. Soisson, Kevin J. Lumb, Sujata Sharma
Crystallization of glycosylated human prolylcarboxypeptidase expressed in Chinese hamster ovary cells is described. The hexagonal crystals belong to space group R32 and diffract to 2.8 Å resolution.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 702–705. Published online May 27, 2010. doi: 10.1107/S1744309110014041
PMCID:
PMC2882774
Yanlin Ma, Cheng Chen, Lei Wei, Qingzhu Yang, Ming Liao, Xuemei Li
The gene segment encoding avian infectious bronchitis virus nonstructural protein 9 has been cloned and expressed in Escherichia coli. The protein has been crystallized and the crystals diffracted X-rays to 2.44 Å resolution.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 706–708. Published online May 29, 2010. doi: 10.1107/S174430911001417X
PMCID:
PMC2882775
Naoki Shibata, Hiroko Tamagaki, Shungo Ohtsuki, Naoki Hieda, Keita Akita, Hirofumi Komori, Yasuhito Shomura, Shin-ichi Terawaki, Tetsuo Toraya, Noritake Yasuoka, Yoshiki Higuchi
Ethanolamine ammonia-lyase from E. coli has been overexpressed, purified and crystallized. The crystals diffracted to 2.2 Å resolution using synchrotron radiation.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 709–711. Published online May 29, 2010. doi: 10.1107/S1744309110014478
PMCID:
PMC2882776
Takashi Umeda, Junichi Katsuki, Yuji Ashikawa, Yusuke Usami, Kengo Inoue, Haruko Noguchi, Zui Fujimoto, Hisakazu Yamane, Hideaki Nojiri
The ferredoxin reductase component of carbazole 1,9a-dioxygenase (Red) is involved in electron transfer from NAD(P)H to ferredoxin. The class IIA Red from Novosphingobium sp. KA1 was crystallized and the crystal diffracted to a resolution of 1.58 Å.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 712–714. Published online May 29, 2010. doi: 10.1107/S1744309110014491
PMCID:
PMC2882777
Fairolniza Mohd Shariff, Raja Noor Zaliha Raja Abd. Rahman, Mohd Shukuri Mohamad Ali, Adam Leow Thean Chor, Mahiran Basri, Abu Bakar Salleh
Thermostable recombinant L2 lipase from thermophilic Bacillus sp. L2 has been crystallized by using counter-diffusion method and diffracted to 2.7 Å resolution. The crystal belongs to the primitive orthorhombic space group P212121 with unit-cell parameters a = 87.44, b = 94.90, c = 126.46 Å.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 715–717. Published online May 29, 2010. doi: 10.1107/S174430911001482X
PMCID:
PMC2882778
Huy Nhat Chu, Jun Kobayashi, Yu Yoshikane, Bunzo Mikami, Toshiharu Yagi
SeMet-substituted pyridoxal 4-dehydrogenase from M. loti MAFF303099 was crystallized and diffraction data were collected to 2.9 Å resolution.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 718–720. Published online May 29, 2010. doi: 10.1107/S1744309110015101
PMCID:
PMC2882779
Niramon Thamwiriyasati, Somsri Sakdee, Phimonphan Chuankhayan, Gerd Katzenmeier, Chun-Jung Chen, Chanan Angsuthanasombat
The crystallization of the Cry4Ba toxin from B. thuringiensis is described.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 721–724. Published online May 29, 2010. doi: 10.1107/S1744309110015344
PMCID:
PMC2882780
David Schwefel, Chris Fröhlich, Oliver Daumke
GIMAP2, a guanine nucleotide-binding protein belonging to the GIMAP family, has been crystallized in various nucleotide-loaded states.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 725–729. Published online May 29, 2010. doi: 10.1107/S174430911001537X
PMCID:
PMC2882781
Vaheh Oganesyan, Melissa M. Damschroder, Sandrina Phipps, Susan D. Wilson, Kimberly E. Cook, Herren Wu, William F. Dall’Acqua
Crystals of the complex between the Fab fragment of a human anti-EphA2 antibody and the N-terminal domain of human EphA2 have been obtained. Diffraction data were collected to 2.55 Å resolution.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 730–733. Published online May 29, 2010. doi: 10.1107/S1744309110015861
PMCID:
PMC2882782
Daniel Gurmu, Sue-Li Dahlroth, Juergen Haas, Pär Nordlund, Heidi Erlandsen
Crystals of the R2 subunit from the oncovirus Kaposi’s sarcoma-associated γ-herpesvirus (KSHV) were obtained by the use of in situ proteolysis. The crystals diffracted to 2.0 Å resolution and belonged to space group P21.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 734–737. Published online May 29, 2010. doi: 10.1107/S1744309110016052
PMCID:
PMC2882783
Angelo Merli, Karuppasamy Manikandan, Éva Gráczer, Linda Schuldt, Rajesh Kumar Singh, Péter Závodszky, Mária Vas, Manfred S. Weiss
The enzyme 3-isopropylmalate dehydrogenase (IPMDH) from T. thermophilus, which catalyses the penultimate reaction step of the leucine-biosynthesis pathway, has been crystallized in various states along its reaction coordinate.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 738–743. Published online May 29, 2010. doi: 10.1107/S174430911001626X
PMCID:
PMC2882784
Laboratory Communications
Len Ito, Kentaro Shiraki, Hiroshi Yamaguchi
New types of aggregation suppressors, such as amino acids and their derivatives, were focused on as fourth-component additives. Data were obtained that indicated that the additives promote protein crystallization.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 744–749. Published online May 27, 2010. doi: 10.1107/S1744309110013710
PMCID:
PMC2882785
Len Ito, Kentaro Shiraki, Hiroshi Yamaguchi
During the past two decades, amino acids and amino-acid derivatives have been applied in various fields of protein chemistry. The potential use of amino acids and their derivatives as new precipitating agents is described.
Acta Crystallogr Sect F Struct Biol Cryst Commun. Jun 1, 2010; 66(Pt 6): 750–754. Published online May 27, 2010. doi: 10.1107/S174430911001376X
PMCID:
PMC2882786
Articles from Acta Crystallographica Section F: Structural Biology and Crystallization Communications are provided here courtesy of
International Union of Crystallography