BMC Proc Volume 5(Suppl 3); 2011

Volume 5(Suppl 3); 2011

Proceedings

Comparison of analyses of the QTLMAS XIV common dataset. I: genomic selection

Marcin Pszczola, Tomasz Strabel, Anna Wolc, Sebastian Mucha, Maciej Szydlowski

BMC Proc. 2011; 5(Suppl 3): S1. Published online 2011 May 27. doi: 10.1186/1753-6561-5-S3-S1

PMCID:: PMC3103194

Abstract Full Text PDF–191K

Comparison of analyses of the QTLMAS XIV common dataset. II: QTL analysis

Sebastian Mucha, Marcin Pszczoła, Tomasz Strabel, Anna Wolc, Paulina Paczyńska, Maciej Szydlowski

BMC Proc. 2011; 5(Suppl 3): S2. Published online 2011 May 27. doi: 10.1186/1753-6561-5-S3-S2

PMCID:: PMC3103201

Abstract Full Text PDF–245K

QTLMAS 2010: simulated dataset

Maciej Szydlowski, Paulina Paczyńska

BMC Proc. 2011; 5(Suppl 3): S3. Published online 2011 May 27. doi: 10.1186/1753-6561-5-S3-S3

PMCID:: PMC3103202

Abstract Full Text PDF–231K

A Bayesian approach to detect QTL affecting a simulated binary and quantitative trait

Aniek C Bouwman, Luc LG Janss, Henri CM Heuven

BMC Proc. 2011; 5(Suppl 3): S4. Published online 2011 May 27. doi: 10.1186/1753-6561-5-S3-S4

PMCID:: PMC3103203

Abstract Full Text PDF–317K

Estimating genomic breeding values and detecting QTL using univariate and bivariate models

Mario PL Calus, Han A Mulder, Roel F Veerkamp

BMC Proc. 2011; 5(Suppl 3): S5. Published online 2011 May 27. doi: 10.1186/1753-6561-5-S3-S5

PMCID:: PMC3103204

Abstract Full Text PDF–504K

Genotype imputation for the prediction of genomic breeding values in non-genotyped and low-density genotyped individuals

Matthew A Cleveland, John M Hickey, Brian P Kinghorn

BMC Proc. 2011; 5(Suppl 3): S6. Published online 2011 May 27. doi: 10.1186/1753-6561-5-S3-S6

PMCID:: PMC3103205

Abstract Full Text PDF–218K

Partial least square regression applied to the QTLMAS 2010 dataset

Albart Coster, Mario P L Calus

BMC Proc. 2011; 5(Suppl 3): S7. Published online 2011 May 27. doi: 10.1186/1753-6561-5-S3-S7

PMCID:: PMC3103206

Abstract Full Text PDF–233K

Association analyses of the MAS-QTL data set using grammar, principal components and Bayesian network methodologies

Burak Karacaören, Tomi Silander, José M Álvarez-Castro, Chris S Haley, Dirk Jan de Koning

BMC Proc. 2011; 5(Suppl 3): S8. Published online 2011 May 27. doi: 10.1186/1753-6561-5-S3-S8

PMCID:: PMC3103207

Abstract Full Text PDF–346K Supplementary Material

Applying different genomic evaluation approaches on QTLMAS2010 dataset

Javad Nadaf, Ricardo Pong-Wong

BMC Proc. 2011; 5(Suppl 3): S9. Published online 2011 May 27. doi: 10.1186/1753-6561-5-S3-S9

PMCID:: PMC3103208

Abstract Full Text PDF–1.1M

Haplotype inference based on Hidden Markov Models in the QTL-MAS 2010 multi-generational dataset

Carl Nettelblad

BMC Proc. 2011; 5(Suppl 3): S10. Published online 2011 May 27. doi: 10.1186/1753-6561-5-S3-S10

PMCID:: PMC3103195

Abstract Full Text PDF–320K

A comparison of random forests, boosting and support vector machines for genomic selection

Joseph O Ogutu, Hans-Peter Piepho, Torben Schulz-Streeck

BMC Proc. 2011; 5(Suppl 3): S11. Published online 2011 May 27. doi: 10.1186/1753-6561-5-S3-S11

PMCID:: PMC3103196

Abstract Full Text PDF–299K

Pre-selection of markers for genomic selection

Torben Schulz-Streeck, Joseph O Ogutu, Hans-Peter Piepho

BMC Proc. 2011; 5(Suppl 3): S12. Published online 2011 May 27. doi: 10.1186/1753-6561-5-S3-S12

PMCID:: PMC3103197

Abstract Full Text PDF–268K

Genomic breeding value prediction and QTL mapping of QTLMAS2010 data using Bayesian Methods

Xiaochen Sun, David Habier, Rohan L Fernando, Dorian J Garrick, Jack CM Dekkers

BMC Proc. 2011; 5(Suppl 3): S13. Published online 2011 May 27. doi: 10.1186/1753-6561-5-S3-S13

PMCID:: PMC3103198

Abstract Full Text PDF–822K

Hierarchical likelihood opens a new way of estimating genetic values using genome-wide dense marker maps

Xia Shen, Lars Rönnegård, Örjan Carlborg

BMC Proc. 2011; 5(Suppl 3): S14. Published online 2011 May 27. doi: 10.1186/1753-6561-5-S3-S14

PMCID:: PMC3103199

Abstract Full Text PDF–358K

Genomic selection for QTL-MAS data using a trait-specific relationship matrix

Zhe Zhang, XiangDong Ding, JianFeng Liu, Dirk-Jan de Koning, Qin Zhang

BMC Proc. 2011; 5(Suppl 3): S15. Published online 2011 May 27. doi: 10.1186/1753-6561-5-S3-S15

PMCID:: PMC3103200

Abstract Full Text PDF–380K

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