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Volume 76(18);  September 2010
Biotechnology
Novel In Vivo-Degradable Cellulose-Chitin Copolymer from Metabolically Engineered Gluconacetobacter xylinus
Vikas Yadav, Bruce J. Paniliatis, Hai Shi, Kyongbum Lee, Peggy Cebe, David L. Kaplan
Appl Environ Microbiol. 2010 September; 76(18): 6257–6265. Published online 2010 July 23. doi: 10.1128/AEM.00698-10
PMCID:
PMC2937499
Abstract Full Text PDF–2.1M Supplementary Material
Characterization of a Family GH5 Xylanase with Activity on Neutral Oligosaccharides and Evaluation as a Pulp Bleaching Aid
Óscar Gallardo, María Fernández-Fernández, Cristina Valls, Susana Valeria Valenzuela, M. Blanca Roncero, Teresa Vidal, Pilar Díaz, F. I. Javier Pastor
Appl Environ Microbiol. 2010 September; 76(18): 6290–6294. Published online 2010 July 23. doi: 10.1128/AEM.00871-10
PMCID:
PMC2937475
Abstract Full Text PDF–656K
Cloning-Independent Expression and Analysis of ω-Transaminases by Use of a Cell-Free Protein Synthesis System
Yong-Chan Kwon, Kyung-Ho Lee, Ho-Cheol Kim, Kyuboem Han, Joo-Hyun Seo, Byung-Gee Kim, Dong-Myung Kim
Appl Environ Microbiol. 2010 September; 76(18): 6295–6298. Published online 2010 July 23. doi: 10.1128/AEM.00029-10
PMCID:
PMC2937503
Abstract Full Text PDF–973K Supplementary Material
Biotransformation of Flurbiprofen by Cunninghamella Species
Jessica Amadio, Katherine Gordon, Cormac D. Murphy
Appl Environ Microbiol. 2010 September; 76(18): 6299–6303. Published online 2010 July 23. doi: 10.1128/AEM.01027-10
PMCID:
PMC2937492
Abstract Full Text PDF–446K
Restoration of Growth Phenotypes of Escherichia coli DH5α in Minimal Media through Reversal of a Point Mutation in purB
Suk-Chae Jung, Chris L. Smith, Ki-Sung Lee, Min-Eui Hong, Dae-Hyuk Kweon, Gregory Stephanopoulos, Yong-Su Jin
Appl Environ Microbiol. 2010 September; 76(18): 6307–6309. Published online 2010 July 30. doi: 10.1128/AEM.01210-10
PMCID:
PMC2937491
Abstract Full Text PDF–299K
Mesophilic Fermentation of Renewable Biomass: Does Hydraulic Retention Time Regulate Methanogen Diversity?
Niclas Krakat, Stefan Schmidt, Paul Scherer
Appl Environ Microbiol. 2010 September; 76(18): 6322–6326. Published online 2010 July 30. doi: 10.1128/AEM.00927-10
PMCID:
PMC2937493
Abstract Full Text PDF–1.1M Supplementary Material
Physiology
Requirement of the Nitrogen Starvation-Induced Protein Sll0783 for Polyhydroxybutyrate Accumulation in Synechocystis sp. Strain PCC 6803
Maximilian Schlebusch, Karl Forchhammer
Appl Environ Microbiol. 2010 September; 76(18): 6101–6107. Published online 2010 July 30. doi: 10.1128/AEM.00484-10
PMCID:
PMC2937498
Abstract Full Text PDF–893K Supplementary Material
Phenotypic Characterization of Shewanella oneidensis MR-1 under Aerobic and Anaerobic Growth Conditions by Using Fourier Transform Infrared Spectroscopy and High-Performance Liquid Chromatography Analyses
Hui Wang, Katherine Hollywood, Roger M. Jarvis, Jonathan R. Lloyd, Royston Goodacre
Appl Environ Microbiol. 2010 September; 76(18): 6266–6276. Published online 2010 July 30. doi: 10.1128/AEM.00912-10
PMCID:
PMC2937474
Abstract Full Text PDF–2.4M
Genetics and Molecular Biology
Transcriptional Regulation of the Terephthalate Catabolism Operon in Comamonas sp. Strain E6
Daisuke Kasai, Masahiro Kitajima, Masao Fukuda, Eiji Masai
Appl Environ Microbiol. 2010 September; 76(18): 6047–6055. Published online 2010 July 23. doi: 10.1128/AEM.00742-10
PMCID:
PMC2937507
Abstract Full Text PDF–1.2M
Catabolite Repression of Aox in Pichia pastoris Is Dependent on Hexose Transporter PpHxt1 and Pexophagy
Ping Zhang, Wenwen Zhang, Xiangshan Zhou, Peng Bai, James M. Cregg, Yuanxing Zhang
Appl Environ Microbiol. 2010 September; 76(18): 6108–6118. Published online 2010 July 23. doi: 10.1128/AEM.00607-10
PMCID:
PMC2937511
Abstract Full Text PDF–1.7M
Regulation of the Marinomonas mediterranea Antimicrobial Protein Lysine Oxidase by l-Lysine and the Sensor Histidine Kinase PpoS
Luisa R. Molina-Quintero, Patricia Lucas-Elío, Antonio Sanchez-Amat
Appl Environ Microbiol. 2010 September; 76(18): 6141–6149. Published online 2010 July 23. doi: 10.1128/AEM.00690-10
PMCID:
PMC2937512
Abstract Full Text PDF–259K Supplementary Material
Accidental Selection and Intentional Restoration of Sporulation-Deficient Bacillus anthracis Mutants
Inka Sastalla, M. J. Rosovitz, Stephen H. Leppla
Appl Environ Microbiol. 2010 September; 76(18): 6318–6321. Published online 2010 July 16. doi: 10.1128/AEM.00950-10
PMCID:
PMC2937495
Abstract Full Text PDF–255K Supplementary Material
Enzymology and Protein Engineering
2-Haloacrylate Hydratase, a New Class of Flavoenzyme That Catalyzes the Addition of Water to the Substrate for Dehalogenation
Amr M. Mowafy, Tatsuo Kurihara, Atsushi Kurata, Tadashi Uemura, Nobuyoshi Esaki
Appl Environ Microbiol. 2010 September; 76(18): 6032–6037. Published online 2010 July 23. doi: 10.1128/AEM.00334-10
PMCID:
PMC2937477
Abstract Full Text PDF–266K
Prolyl Aminopeptidase from Streptomyces thermoluteus subsp. fuscus Strain NBRC14270 and Synthesis of Proline-Containing Peptides by Its S144C Variant
Yukihiro Yamamoto, Hirokazu Usuki, Masaki Iwabuchi, Tadashi Hatanaka
Appl Environ Microbiol. 2010 September; 76(18): 6180–6185. Published online 2010 July 30. doi: 10.1128/AEM.01242-10
PMCID:
PMC2937496
Abstract Full Text PDF–585K Supplementary Material
Mycology
Phagocytosis of Cryptococcus neoformans by, and Nonlytic Exocytosis from, Acanthamoeba castellanii
Cara J. Chrisman, Mauricio Alvarez, Arturo Casadevall
Appl Environ Microbiol. 2010 September; 76(18): 6056–6062. Published online 2010 July 30. doi: 10.1128/AEM.00812-10
PMCID:
PMC2937486
Abstract Full Text PDF–1.0M Supplementary Material
Cellotriose and Cellotetraose as Inducers of the Genes Encoding Cellobiohydrolases in the Basidiomycete Phanerochaete chrysosporium
Hitoshi Suzuki, Kiyohiko Igarashi, Masahiro Samejima
Appl Environ Microbiol. 2010 September; 76(18): 6164–6170. Published online 2010 July 23. doi: 10.1128/AEM.00724-10
PMCID:
PMC2937500
Abstract Full Text PDF–919K
Public Health Microbiology
Interaction of Mycobacterium ulcerans with Mosquito Species: Implications for Transmission and Trophic Relationships
John R. Wallace, Matthew C. Gordon, Lindsey Hartsell, Lydia Mosi, M. Eric Benbow, Richard W. Merritt, Pamela L. C. Small
Appl Environ Microbiol. 2010 September; 76(18): 6215–6222. Published online 2010 July 30. doi: 10.1128/AEM.00340-10
PMCID:
PMC2937476
Abstract Full Text PDF–305K
Presence of Mycobacterium avium subsp. paratuberculosis in Environmental Samples Collected on Commercial Dutch Dairy Farms
Susanne W. F. Eisenberg, Ad P. Koets, Jeroen Hoeboer, Marina Bouman, Dick Heederik, Mirjam Nielen
Appl Environ Microbiol. 2010 September; 76(18): 6310–6312. Published online 2010 July 23. doi: 10.1128/AEM.00998-10
PMCID:
PMC2937508
Abstract Full Text PDF–198K
Environmental Microbiology
Construction of Self-Transmissible Green Fluorescent Protein-Based Biosensor Plasmids and Their Use for Identification of N-Acyl Homoserine-Producing Bacteria in Lake Sediments
Putthapoom Lumjiaktase, Claudio Aguilar, Tom Battin, Kathrin Riedel, Leo Eberl
Appl Environ Microbiol. 2010 September; 76(18): 6119–6127. Published online 2010 July 30. doi: 10.1128/AEM.00677-10
PMCID:
PMC2937502
Abstract Full Text PDF–1.3M
Quantitative PCR Assay for Mycobacterium pseudoshottsii and Mycobacterium shottsii and Application to Environmental Samples and Fishes from the Chesapeake Bay
D. T. Gauthier, K. S. Reece, J. Xiao, M. W. Rhodes, H. I. Kator, R. J. Latour, C. F. Bonzek, J. M. Hoenig, W. K. Vogelbein
Appl Environ Microbiol. 2010 September; 76(18): 6171–6179. Published online 2010 July 23. doi: 10.1128/AEM.01091-10
PMCID:
PMC2937484
Abstract Full Text PDF–785K
Effect of Nitric Oxide on Anammox Bacteria
Boran Kartal, Nico C. G. Tan, Erwin Van de Biezen, Marlies J. Kampschreur, Mark C. M. Van Loosdrecht, Mike S. M. Jetten
Appl Environ Microbiol. 2010 September; 76(18): 6304–6306. Published online 2010 July 30. doi: 10.1128/AEM.00991-10
PMCID:
PMC2937485
Abstract Full Text PDF–214K
Microbial Ecology
Differential Regulation of Six Heavy Metal Efflux Systems in the Response of Myxococcus xanthus to Copper
Aurelio Moraleda-Muñoz, Juana Pérez, Antonio Luis Extremera, José Muñoz-Dorado
Appl Environ Microbiol. 2010 September; 76(18): 6069–6076. Published online 2010 June 18. doi: 10.1128/AEM.00753-10
PMCID:
PMC2937488
Abstract Full Text PDF–1.2M Supplementary Material
Expression and Physiological Role of Three Myxococcus xanthus Copper-Dependent P1B-Type ATPases during Bacterial Growth and Development
Aurelio Moraleda-Muñoz, Juana Pérez, Antonio Luis Extremera, José Muñoz-Dorado
Appl Environ Microbiol. 2010 September; 76(18): 6077–6084. Published online 2010 July 23. doi: 10.1128/AEM.00755-10
PMCID:
PMC2937514
Abstract Full Text PDF–1.3M Supplementary Material
Scent of Danger: Floc Formation by a Freshwater Bacterium Is Induced by Supernatants from a Predator-Prey Coculture
Judith F. Blom, Yannick S. Zimmermann, Thomas Ammann, Jakob Pernthaler
Appl Environ Microbiol. 2010 September; 76(18): 6156–6163. Published online 2010 July 23. doi: 10.1128/AEM.01455-10
PMCID:
PMC2937497
Abstract Full Text PDF–940K
Estimation of Uptake of Humic Substances from Different Sources by Escherichia coli Cells under Optimum and Salt Stress Conditions by Use of Tritium-Labeled Humic Materials
Natalia A. Kulikova, Irina V. Perminova, Gennady A. Badun, Maria G. Chernysheva, Olga V. Koroleva, Eugenia A. Tsvetkova
Appl Environ Microbiol. 2010 September; 76(18): 6223–6230. Published online 2010 July 16. doi: 10.1128/AEM.00905-10
PMCID:
PMC2937489
Abstract Full Text PDF–436K
Food Microbiology
Use of Logistic Regression for Prediction of the Fate of Staphylococcus aureus in Pasteurized Milk in the Presence of Two Lytic Phages
José M. Obeso, Pilar García, Beatriz Martínez, Francisco Noé Arroyo-López, Antonio Garrido-Fernández, Ana Rodriguez
Appl Environ Microbiol. 2010 September; 76(18): 6038–6046. Published online 2010 July 23. doi: 10.1128/AEM.00613-10
PMCID:
PMC2937510
Abstract Full Text PDF–1.3M
Sequencing and Transcriptional Analysis of the Streptococcus thermophilus Histamine Biosynthesis Gene Cluster: Factors That Affect Differential hdcA Expression
Marina Calles-Enríquez, Benjamin Hjort Eriksen, Pia Skov Andersen, Fergal P. Rattray, Annette H. Johansen, María Fernández, Victor Ladero, Miguel A. Alvarez
Appl Environ Microbiol. 2010 September; 76(18): 6231–6238. Published online 2010 July 23. doi: 10.1128/AEM.00827-10
PMCID:
PMC2937487
Abstract Full Text PDF–645K Supplementary Material
Plant Microbiology
Interplay between Wheat Cultivars, Biocontrol Pseudomonads, and Soil
Joana Beatrice Meyer, Matthias Peter Lutz, Michele Frapolli, Maria Péchy-Tarr, Laurène Rochat, Christoph Keel, Geneviève Défago, Monika Maurhofer
Appl Environ Microbiol. 2010 September; 76(18): 6196–6204. Published online 2010 July 30. doi: 10.1128/AEM.00752-10
PMCID:
PMC2937482
Abstract Full Text PDF–358K Supplementary Material
Invertebrate Microbiology
New Method for Counting Bacteria Associated with Coral Mucus
Melissa Garren, Farooq Azam
Appl Environ Microbiol. 2010 September; 76(18): 6128–6133. Published online 2010 July 23. doi: 10.1128/AEM.01100-10
PMCID:
PMC2937480
Abstract Full Text PDF–606K Supplementary Material
Chitin Utilization by the Insect-Transmitted Bacterium Xylella fastidiosa
Nabil Killiny, Simone S. Prado, Rodrigo P. P. Almeida
Appl Environ Microbiol. 2010 September; 76(18): 6134–6140. Published online 2010 July 23. doi: 10.1128/AEM.01036-10
PMCID:
PMC2937478
Abstract Full Text PDF–930K Supplementary Material
Detection of New cry Genes of Bacillus thuringiensis by Use of a Novel PCR Primer System
Pedro A. Noguera, Jorge E. Ibarra
Appl Environ Microbiol. 2010 September; 76(18): 6150–6155. Published online 2010 July 23. doi: 10.1128/AEM.00797-10
PMCID:
PMC2937483
Abstract Full Text PDF–401K
Effect of Earthworm Feeding Guilds on Ingested Dissimilatory Nitrate Reducers and Denitrifiers in the Alimentary Canal of the Earthworm
Peter S. Depkat-Jakob, Maik Hilgarth, Marcus A. Horn, Harold L. Drake
Appl Environ Microbiol. 2010 September; 76(18): 6205–6214. Published online 2010 July 23. doi: 10.1128/AEM.01373-10
PMCID:
PMC2937516
Abstract Full Text PDF–2.1M Supplementary Material
Yersinia enterocolitica Infection and tcaA-Dependent Killing of Caenorhabditis elegans
Britta Spanier, Mandy Starke, Fabian Higel, Siegfried Scherer, Thilo M. Fuchs
Appl Environ Microbiol. 2010 September; 76(18): 6277–6285. Published online 2010 July 16. doi: 10.1128/AEM.01274-10
PMCID:
PMC2937509
Abstract Full Text PDF–936K Supplementary Material
Methods
Pronounced Effect of the Nature of the Inoculum on Biofilm Development in Flow Systems
Otini Kroukamp, Romeo G. Dumitrache, Gideon M. Wolfaardt
Appl Environ Microbiol. 2010 September; 76(18): 6025–6031. Published online 2010 July 16. doi: 10.1128/AEM.00070-10
PMCID:
PMC2937504
Abstract Full Text PDF–850K
Use of Amino Acids as Inducers for High-Level Protein Expression in the Single-Protein Production System
S. Thangminlal Vaiphei, Lili Mao, Tsutomu Shimazu, Jung-Ho Park, Masayori Inouye
Appl Environ Microbiol. 2010 September; 76(18): 6063–6068. Published online 2010 July 23. doi: 10.1128/AEM.00815-10
Correction in:
Appl Environ Microbiol. 2010 November; 76(21): 7371.
PMCID:
PMC2937506
Abstract Full Text PDF–1.8M Correction
High-Resolution In Situ Genotyping of Legionella pneumophila Populations in Drinking Water by Multiple-Locus Variable-Number Tandem-Repeat Analysis Using Environmental DNA
Leila Kahlisch, Karsten Henne, Josefin Draheim, Ingrid Brettar, Manfred G. Höfle
Appl Environ Microbiol. 2010 September; 76(18): 6186–6195. Published online 2010 July 23. doi: 10.1128/AEM.00416-10
PMCID:
PMC2937494
Abstract Full Text PDF–1.1M
Combined Gel Probe and Isotope Labeling Technique for Measuring Dissimilatory Nitrate Reduction to Ammonium in Sediments at Millimeter-Level Resolution
Peter Stief, Anna Behrendt, Gaute Lavik, Dirk De Beer
Appl Environ Microbiol. 2010 September; 76(18): 6239–6247. Published online 2010 July 23. doi: 10.1128/AEM.01104-10
PMCID:
PMC2937481
Abstract Full Text PDF–334K
Identification of the Corn Pathogen Pantoea stewartii by Mass Spectrometry of Whole-Cell Extracts and Its Detection with Novel PCR Primers
Annette Wensing, Stefan Zimmermann, Klaus Geider
Appl Environ Microbiol. 2010 September; 76(18): 6248–6256. Published online 2010 July 23. doi: 10.1128/AEM.01032-10
PMCID:
PMC2937501
Abstract Full Text PDF–623K
Validation of a Self-Excising Marker in the Human Pathogen Aspergillus fumigatus by Employing the β-Rec/six Site-Specific Recombination System
Thomas Hartmann, Michaela Dümig, Basem M. Jaber, Edyta Szewczyk, Patrick Olbermann, Joachim Morschhäuser, Sven Krappmann
Appl Environ Microbiol. 2010 September; 76(18): 6313–6317. Published online 2010 July 23. doi: 10.1128/AEM.00882-10
PMCID:
PMC2937505
Abstract Full Text PDF–512K
Evolutionary and Genomic Microbiology
A Population Genetics-Based and Phylogenetic Approach to Understanding the Evolution of Virulence in the Genus Listeria
Henk C. den Bakker, Brittany N. Bundrant, Esther D. Fortes, Renato H. Orsi, Martin Wiedmann
Appl Environ Microbiol. 2010 September; 76(18): 6085–6100. Published online 2010 July 23. doi: 10.1128/AEM.00447-10
PMCID:
PMC2937515
Abstract Full Text PDF–1.0M Supplementary Material
Identification of a Novel Class of Membrane-Bound [NiFe]-Hydrogenases in Thermococcus onnurineus NA1 by In Silico Analysis
Jae Kyu Lim, Sung Gyun Kang, Alexander V. Lebedinsky, Jung-Hyun Lee, Hyun Sook Lee
Appl Environ Microbiol. 2010 September; 76(18): 6286–6289. Published online 2010 July 23. doi: 10.1128/AEM.00123-10
PMCID:
PMC2937479
Abstract Full Text PDF–1.0M Supplementary Material
Erratum
Adaptive Evolution of Escherichia coli K-12 MG1655 during Growth on a Nonnative Carbon Source, l-1,2-Propanediol
Dae-Hee Lee, Bernhard Ø. Palsson
Appl Environ Microbiol. 2010 September; 76(18): 6327. doi: 10.1128/AEM.01776-10
Corrects:
Appl Environ Microbiol. 2010 July; 76(13): 4158–4168.
PMCID:
PMC2937490
Correction PDF–15K Original Article
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