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Logo of gseBioMed CentralBiomed Central Web Sitesearchsubmit a manuscriptregisterthis journalGenetics, Selection, Evolution : GSEJournal Front Page
 
Volume 41(1);  2009
Editorial
GSE is now an open access journal published by BioMed Central
Hélène Hayes, Philippe Baret, Didier Boichard
Genet Sel Evol. 2009; 41(1): 1. Published online 2009 January 5. doi: 10.1186/1297-9686-41-1
PMCID:
PMC2637031
Full Text PDF–133K
Research
A fast algorithm for BayesB type of prediction of genome-wide estimates of genetic value
Theo HE Meuwissen, Trygve R Solberg, Ross Shepherd, John A Woolliams
Genet Sel Evol. 2009; 41(1): 2. Published online 2009 January 5. doi: 10.1186/1297-9686-41-2
PMCID:
PMC2637029
Abstract Full Text PDF–485K
Genome-assisted prediction of a quantitative trait measured in parents and progeny: application to food conversion rate in chickens
Oscar González-Recio, Daniel Gianola, Guilherme JM Rosa, Kent A Weigel, Andreas Kranis
Genet Sel Evol. 2009; 41(1): 3. Published online 2009 January 5. doi: 10.1186/1297-9686-41-3
PMCID:
PMC3225922
Abstract Full Text PDF–483K
Mapping carcass and meat quality QTL on Sus Scrofa chromosome 2 in commercial finishing pigs
Henri CM Heuven, Rik HJ van Wijk, Bert Dibbits, Tony A van Kampen, Egbert F Knol, Henk Bovenhuis
Genet Sel Evol. 2009; 41(1): 4. Published online 2009 January 5. doi: 10.1186/1297-9686-41-4
PMCID:
PMC2637027
Abstract Full Text PDF–269K
Genetic diversity of a large set of horse breeds raised in France assessed by microsatellite polymorphism
Grégoire Leroy, Lucille Callède, Etienne Verrier, Jean-Claude Mériaux, Anne Ricard, Coralie Danchin-Burge, Xavier Rognon
Genet Sel Evol. 2009; 41(1): 5. Published online 2009 January 5. doi: 10.1186/1297-9686-41-5
PMCID:
PMC3225878
Abstract Full Text PDF–1.4M Supplementary Material
Detecting parent of origin and dominant QTL in a two-generation commercial poultry pedigree using variance component methodology
Suzanne J Rowe, Ricardo Pong-Wong, Christopher S Haley, Sara A Knott, Dirk-Jan De Koning
Genet Sel Evol. 2009; 41(1): 6. Published online 2009 January 5. doi: 10.1186/1297-9686-41-6
PMCID:
PMC2637028
Abstract Full Text PDF–339K Supplementary Material
A mating method accounting for inbreeding and multi-trait selection in dairy cattle populations
Jean-Jacques Colleau, Kevin Tual, Hervé de Preaumont, Didier Regaldo
Genet Sel Evol. 2009; 41(1): 7. Published online 2009 January 5. doi: 10.1186/1297-9686-41-7
PMCID:
PMC3225904
Abstract Full Text PDF–239K
Changes in muscle cell cation regulation and meat quality traits are associated with genetic selection for high body weight and meat yield in broiler chickens
Dale A Sandercock, Zoe E Barker, Malcolm A Mitchell, Paul M Hocking
Genet Sel Evol. 2009; 41(1): 8. Published online 2009 January 14. doi: 10.1186/1297-9686-41-8
PMCID:
PMC2637030
Abstract Full Text PDF–264K Supplementary Material
Effects of pedigree errors on the efficiency of conservation decisions
Pieter A Oliehoek, Piter Bijma
Genet Sel Evol. 2009; 41(1): 9. Published online 2009 January 14. doi: 10.1186/1297-9686-41-9
PMCID:
PMC3225833
Abstract Full Text PDF–358K
Model for fitting longitudinal traits subject to threshold response applied to genetic evaluation for heat tolerance
Juan Pablo Sánchez, Romdhane Rekaya, Ignacy Misztal
Genet Sel Evol. 2009; 41(1): 10. Published online 2009 January 14. doi: 10.1186/1297-9686-41-10
PMCID:
PMC2671243
Abstract Full Text PDF–499K
Effects of the number of markers per haplotype and clustering of haplotypes on the accuracy of QTL mapping and prediction of genomic breeding values
Mario PL Calus, Theo HE Meuwissen, Jack J Windig, Egbert F Knol, Chris Schrooten, Addie LJ Vereijken, Roel F Veerkamp
Genet Sel Evol. 2009; 41(1): 11. Published online 2009 January 15. doi: 10.1186/1297-9686-41-11
PMCID:
PMC3225874
Abstract Full Text PDF–620K
Genomic selection of purebreds for crossbred performance
Noelia Ibánẽz-Escriche, Rohan L Fernando, Ali Toosi, Jack CM Dekkers
Genet Sel Evol. 2009; 41(1): 12. Published online 2009 January 15. doi: 10.1186/1297-9686-41-12
PMCID:
PMC2730054
Abstract Full Text PDF–284K
Performance comparison of dwarf laying hens segregating for the naked neck gene in temperate and subtropical environments
Chih-Feng Chen, David Gourichon, Nein-Zu Huang, Yen-Pai Lee, André Bordas, Michèle Tixier-Boichard
Genet Sel Evol. 2009; 41(1): 13. Published online 2009 January 16. doi: 10.1186/1297-9686-41-13
PMCID:
PMC3225903
Abstract Full Text PDF–288K
Large-scale association study for structural soundness and leg locomotion traits in the pig
Bin Fan, Suneel K Onteru, Benny E Mote, Timo Serenius, Kenneth J Stalder, Max F Rothschild
Genet Sel Evol. 2009; 41(1): 14. Published online 2009 January 21. doi: 10.1186/1297-9686-41-14
PMCID:
PMC2657774
Abstract Full Text PDF–279K Supplementary Material
Detecting selection-induced departures from Hardy-Weinberg proportions
Joseph Lachance
Genet Sel Evol. 2009; 41(1): 15. Published online 2009 January 21. doi: 10.1186/1297-9686-41-15
PMCID:
PMC2660905
Abstract Full Text PDF–350K
Purging of inbreeding depression within the Irish Holstein-Friesian population
Sinéad Mc Parland, Francis Kearney, Donagh P Berry
Genet Sel Evol. 2009; 41(1): 16. Published online 2009 January 21. doi: 10.1186/1297-9686-41-16
PMCID:
PMC3225871
Abstract Full Text PDF–268K
Ovine progressive pneumonia provirus levels are unaffected by the prion 171R allele in an Idaho sheep flock
Robert D Harrington, Lynn M Herrmann-Hoesing, Stephen N White, Katherine I O'Rourke, Donald P Knowles
Genet Sel Evol. 2009; 41(1): 17. Published online 2009 January 22. doi: 10.1186/1297-9686-41-17
PMCID:
PMC3225825
Abstract Full Text PDF–754K
Comparison of classification methods for detecting associations between SNPs and chick mortality
Nanye Long, Daniel Gianola, Guilherme JM Rosa, Kent A Weigel, Santiago Avendaño
Genet Sel Evol. 2009; 41(1): 18. Published online 2009 January 23. doi: 10.1186/1297-9686-41-18
PMCID:
PMC3225888
Abstract Full Text PDF–733K
A genetic epidemiological model to describe resistance to an endemic bacterial disease in livestock: application to footrot in sheep
Gert Jan Nieuwhof, Joanne Conington, Stephen C Bishop
Genet Sel Evol. 2009; 41(1): 19. Published online 2009 January 26. doi: 10.1186/1297-9686-41-19
PMCID:
PMC2657214
Abstract Full Text PDF–321K
Genomic breeding value estimation using nonparametric additive regression models
Jörn Bennewitz, Trygve Solberg, Theo Meuwissen
Genet Sel Evol. 2009; 41(1): 20. Published online 2009 January 27. doi: 10.1186/1297-9686-41-20
PMCID:
PMC2657215
Abstract Full Text PDF–363K
Genetic architecture of trout from Albania as revealed by mtDNA control region variation
Aleš Snoj, Saša Marić, Patrick Berrebi, Alain J Crivelli, Spase Shumka, Simona Sušnik
Genet Sel Evol. 2009; 41(1): 22. Published online 2009 February 2. doi: 10.1186/1297-9686-41-22
PMCID:
PMC3225828
Abstract Full Text PDF–1.0M
Estimation of prediction error variances via Monte Carlo sampling methods using different formulations of the prediction error variance
John M Hickey, Roel F Veerkamp, Mario PL Calus, Han A Mulder, Robin Thompson
Genet Sel Evol. 2009; 41(1): 23. Published online 2009 February 9. doi: 10.1186/1297-9686-41-23
PMCID:
PMC3225835
Abstract Full Text PDF–396K
Casein haplotypes and their association with milk production traits in Norwegian Red cattle
Heidi Nilsen, Hanne Gro Olsen, Ben Hayes, Erling Sehested, Morten Svendsen, Torfinn Nome, Theo Meuwissen, Sigbjørn Lien
Genet Sel Evol. 2009; 41(1): 24. Published online 2009 February 20. doi: 10.1186/1297-9686-41-24
PMCID:
PMC3225817
Abstract Full Text PDF–853K Supplementary Material
Inclusion of genetically identical animals to a numerator relationship matrix and modification of its inverse
Takuro Oikawa, Kazuhiro Yasuda
Genet Sel Evol. 2009; 41(1): 25. Published online 2009 March 3. doi: 10.1186/1297-9686-41-25
PMCID:
PMC2674412
Abstract Full Text PDF–325K
Precision of genetic parameters and breeding values estimated in marker assisted BLUP genetic evaluation
Stefan Neuner, Christian Edel, Reiner Emmerling, Georg Thaller, Kay-Uwe Götz
Genet Sel Evol. 2009; 41(1): 26. Published online 2009 March 4. doi: 10.1186/1297-9686-41-26
PMCID:
PMC2657907
Abstract Full Text PDF–295K
Genomic scan for quantitative trait loci of chemical and physical body composition and deposition on pig chromosome X including the pseudoautosomal region of males
Carol-Anne Duthie, Geoff Simm, Miguel Pérez-Enciso, Andrea Doeschl-Wilson, Ernst Kalm, Pieter W Knap, Rainer Roehe
Genet Sel Evol. 2009; 41(1): 27. Published online 2009 March 11. doi: 10.1186/1297-9686-41-27
PMCID:
PMC2666071
Abstract Full Text PDF–302K Supplementary Material
Duck (Anas platyrhynchos) linkage mapping by AFLP fingerprinting
Chang-Wen Huang, Yu-Shin Cheng, Roger Rouvier, Kuo-Tai Yang, Chean-Ping Wu, Hsiu-Lin Huang, Mu-Chiou Huang
Genet Sel Evol. 2009; 41(1): 28. Published online 2009 March 17. doi: 10.1186/1297-9686-41-28
PMCID:
PMC2666072
Abstract Full Text PDF–356K
Reducing dimensionality for prediction of genome-wide breeding values
Trygve R Solberg, Anna K Sonesson, John A Woolliams, Theo HE Meuwissen
Genet Sel Evol. 2009; 41(1): 29. Published online 2009 March 18. doi: 10.1186/1297-9686-41-29
PMCID:
PMC2671482
Abstract Full Text PDF–281K
Reducing the bias of estimates of genotype by environment interactions in random regression sire models
Marie Lillehammer, Jørgen Ødegård, Theo HE Meuwissen
Genet Sel Evol. 2009; 41(1): 30. Published online 2009 March 19. doi: 10.1186/1297-9686-41-30
PMCID:
PMC2670816
Abstract Full Text PDF–269K
Eleven generations of selection for the duration of fertility in the intergeneric crossbreeding of ducks
Yu-Shin Cheng, Roger Rouvier, Hsiao-Lung Liu, Shang-Chi Huang, Yu-Chia Huang, Chung-Wen Liao, Jui-Jane Liu Tai, Chein Tai, Jean-Paul Poivey
Genet Sel Evol. 2009; 41(1): 32. Published online 2009 March 31. doi: 10.1186/1297-9686-41-32
PMCID:
PMC2674413
Abstract Full Text PDF–365K
Estimation in a multiplicative mixed model involving a genetic relationship matrix
Alison M Kelly, Brian R Cullis, Arthur R Gilmour, John A Eccleston, Robin Thompson
Genet Sel Evol. 2009; 41(1): 33. Published online 2009 April 9. doi: 10.1186/1297-9686-41-33
PMCID:
PMC2686677
Abstract Full Text PDF–308K
Mapping quantitative trait loci (QTL) in sheep. I. A new male framework linkage map and QTL for growth rate and body weight
Herman W Raadsma, Peter C Thomson, Kyall R Zenger, Colin Cavanagh, Mary K Lam, Elisabeth Jonas, Marilyn Jones, Gina Attard, David Palmer, Frank W Nicholas
Genet Sel Evol. 2009; 41(1): 34. Published online 2009 April 24. doi: 10.1186/1297-9686-41-34
PMCID:
PMC2686678
Abstract Full Text PDF–431K Supplementary Material
Accuracy of breeding values of 'unrelated' individuals predicted by dense SNP genotyping
Theo HE Meuwissen
Genet Sel Evol. 2009; 41(1): 35. Published online 2009 June 11. doi: 10.1186/1297-9686-41-35
PMCID:
PMC2708128
Abstract Full Text PDF–331K
Association of selected SNP with carcass and taste panel assessed meat quality traits in a commercial population of Aberdeen Angus-sired beef cattle
Jennifer L Gill, Stephen C Bishop, Caroline McCorquodale, John L Williams, Pamela Wiener
Genet Sel Evol. 2009; 41(1): 36. Published online 2009 June 25. doi: 10.1186/1297-9686-41-36
PMCID:
PMC2714298
Abstract Full Text PDF–325K
Testing strategies for genomic selection in aquaculture breeding programs
Anna K Sonesson, Theo HE Meuwissen
Genet Sel Evol. 2009; 41(1): 37. Published online 2009 June 30. doi: 10.1186/1297-9686-41-37
PMCID:
PMC2714299
Abstract Full Text PDF–265K
Introgression of a major QTL from an inferior into a superior population using genomic selection
Jørgen Ødegård, Anna K Sonesson, M Hossein Yazdi, Theo HE Meuwissen
Genet Sel Evol. 2009; 41(1): 38. Published online 2009 July 27. doi: 10.1186/1297-9686-41-38
PMCID:
PMC2731732
Abstract Full Text PDF–1.6M
History and structure of the closed pedigreed population of Icelandic Sheepdogs
Pieter A Oliehoek, Piter Bijma, Arie van der Meijden
Genet Sel Evol. 2009; 41(1): 39. Published online 2009 August 6. doi: 10.1186/1297-9686-41-39
PMCID:
PMC2736928
Abstract Full Text PDF–437K
Haplotype inference in crossbred populations without pedigree information
Albart Coster, Henri CM Heuven, Rohan L Fernando, Jack CM Dekkers
Genet Sel Evol. 2009; 41(1): 40. Published online 2009 August 11. doi: 10.1186/1297-9686-41-40
PMCID:
PMC2741458
Abstract Full Text PDF–272K
Genetic variation in the pleiotropic association between physical activity and body weight in mice
Larry J Leamy, Daniel Pomp, J Timothy Lightfoot
Genet Sel Evol. 2009; 41(1): 41. Published online 2009 September 23. doi: 10.1186/1297-9686-41-41
PMCID:
PMC2760520
Abstract Full Text PDF–443K Supplementary Material
Fuzzy classification of phantom parent groups in an animal model
Freddy Fikse
Genet Sel Evol. 2009; 41(1): 42. Published online 2009 September 28. doi: 10.1186/1297-9686-41-42
PMCID:
PMC2762463
Abstract Full Text PDF–302K
Linear models for joint association and linkage QTL mapping
Andrés Legarra, Rohan L Fernando
Genet Sel Evol. 2009; 41(1): 43. Published online 2009 September 29. doi: 10.1186/1297-9686-41-43
PMCID:
PMC2764561
Abstract Full Text PDF–483K
Detection of multiple quantitative trait loci and their pleiotropic effects in outbred pig populations
Yoshitaka Nagamine, Ricardo Pong-Wong, Peter M Visscher, Chris S Haley
Genet Sel Evol. 2009; 41(1): 44. Published online 2009 October 6. doi: 10.1186/1297-9686-41-44
PMCID:
PMC2762464
Abstract Full Text PDF–351K
Mapping quantitative trait loci (QTL) in sheep. II. Meta-assembly and identification of novel QTL for milk production traits in sheep
Herman W Raadsma, Elisabeth Jonas, David McGill, Matthew Hobbs, Mary K Lam, Peter C Thomson
Genet Sel Evol. 2009; 41(1): 45. Published online 2009 October 22. doi: 10.1186/1297-9686-41-45
PMCID:
PMC2772855
Abstract Full Text PDF–1.1M Supplementary Material
Quantitative trait loci for resistance to trichostrongylid infection in Spanish Churra sheep
Beatriz Gutiérrez-Gil, Jorge Pérez, Lorena Álvarez, Maria Martínez-Valladares, Luis-Fernando de la Fuente, Yolanda Bayón, Aranzazu Meana, Fermin San Primitivo, Francisco-Antonio Rojo-Vázquez, Juan-José Arranz
Genet Sel Evol. 2009; 41(1): 46. Published online 2009 October 28. doi: 10.1186/1297-9686-41-46
PMCID:
PMC2776584
Abstract Full Text PDF–974K Supplementary Material
Inheritance of fertility in broiler chickens
Anna Wolc, Ian MS White, Victor E Olori, William G Hill
Genet Sel Evol. 2009; 41(1): 47. Published online 2009 October 29. doi: 10.1186/1297-9686-41-47
PMCID:
PMC2775730
Abstract Full Text PDF–577K
Estimated breeding values and association mapping for persistency and total milk yield using natural cubic smoothing splines
Klara L Verbyla, Arunas P Verbyla
Genet Sel Evol. 2009; 41(1): 48. Published online 2009 November 5. doi: 10.1186/1297-9686-41-48
PMCID:
PMC2785761
Abstract Full Text PDF–728K
Assessing population genetic structure via the maximisation of genetic distance
Silvia T Rodríguez-Ramilo, Miguel A Toro, Jesús Fernández
Genet Sel Evol. 2009; 41(1): 49. Published online 2009 November 9. doi: 10.1186/1297-9686-41-49
PMCID:
PMC2776585
Abstract Full Text PDF–332K
A fast algorithm for estimating transmission probabilities in QTL detection designs with dense maps
Jean-Michel Elsen, Olivier Filangi, Hélène Gilbert, Pascale Le Roy, Carole Moreno
Genet Sel Evol. 2009; 41(1): 50. Published online 2009 November 17. doi: 10.1186/1297-9686-41-50
PMCID:
PMC2793243
Abstract Full Text PDF–362K
Accuracy of genomic breeding values in multi-breed dairy cattle populations
Ben J Hayes, Phillip J Bowman, Amanda C Chamberlain, Klara Verbyla, Mike E Goddard
Genet Sel Evol. 2009; 41(1): 51. Published online 2009 November 24. doi: 10.1186/1297-9686-41-51
PMCID:
PMC2791750
Abstract Full Text PDF–503K
An efficient algorithm to compute marginal posterior genotype probabilities for every member of a pedigree with loops
Liviu R Totir, Rohan L Fernando, Joseph Abraham
Genet Sel Evol. 2009; 41(1): 52. Published online 2009 December 3. doi: 10.1186/1297-9686-41-52
PMCID:
PMC2801663
Abstract Full Text PDF–519K Supplementary Material
Persistence of accuracy of genome-wide breeding values over generations when including a polygenic effect
Trygve R Solberg, Anna K Sonesson, John A Woolliams, Jørgen Ødegard, Theo HE Meuwissen
Genet Sel Evol. 2009; 41(1): 53. Published online 2009 December 29. doi: 10.1186/1297-9686-41-53
PMCID:
PMC2813225
Abstract Full Text PDF–260K
Traits associated with innate and adaptive immunity in pigs: heritability and associations with performance under different health status conditions
Mary Clapperton, Abigail B Diack, Oswald Matika, Elizabeth J Glass, Christy D Gladney, Martha A Mellencamp, Annabelle Hoste, Stephen C Bishop
Genet Sel Evol. 2009; 41(1): 54. Published online 2009 December 30. doi: 10.1186/1297-9686-41-54
PMCID:
PMC2807426
Abstract Full Text PDF–287K
Deregressing estimated breeding values and weighting information for genomic regression analyses
Dorian J Garrick, Jeremy F Taylor, Rohan L Fernando
Genet Sel Evol. 2009; 41(1): 55. Published online 2009 December 31. doi: 10.1186/1297-9686-41-55
PMCID:
PMC2817680
Abstract Full Text PDF–261K
A comparison of five methods to predict genomic breeding values of dairy bulls from genome-wide SNP markers
Gerhard Moser, Bruce Tier, Ron E Crump, Mehar S Khatkar, Herman W Raadsma
Genet Sel Evol. 2009; 41(1): 56. Published online 2009 December 31. doi: 10.1186/1297-9686-41-56
PMCID:
PMC2814805
Abstract Full Text PDF–1.5M Supplementary Material
Review
Factor-analytic models for genotype × environment type problems and structured covariance matrices
Karin Meyer
Genet Sel Evol. 2009; 41(1): 21. Published online 2009 January 30. doi: 10.1186/1297-9686-41-21
PMCID:
PMC2674411
Abstract Full Text PDF–345K
Correction
Genetic diversity of a large set of horse breeds raised in France assessed by microsatellite polymorphism
Grégoire Leroy, Lucille Callède, Etienne Verrier, Jean-Claude Mériaux, Anne Ricard, Coralie Danchin-Burge, Xavier Rognon
Genet Sel Evol. 2009; 41(1): 31. Published online 2009 March 19. doi: 10.1186/1297-9686-41-31
PMCID:
PMC2662794
Correction PDF–151K
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