This journal provides early access to some articles.
Volume 62(Pt 9); September 1, 2006
Protein Structure Communications
Magnus S. Alphey, Andrew Burton, Michael D. Urbaniak, Geert-Jan Boons, Michael A. J. Ferguson, William N. Hunter
The structure of recombinant T. brucei UDP-galactose-4′-epimerase cocrystallized with NAD+ and the substrate analogue UDP-4-deoxy-4-fluoro-α-d-galactose has been determined at medium resolution. Comparisons with structures of human and E. coli UDP-galactose-4′-epimerase–ligand complexes reveal that the hexose moieties are able to adopt different orientations in the active
...Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 September 1; 62(Pt 9): 829–834. Published online 2006 August 11. doi: 10.1107/S1744309106028740
- PMCID:
- PMC2242870
Tarmo P. Roosild, Samantha Castronovo, Senyon Choe
The X-ray crystallographic analysis of anti-FLAG M2 Fab is reported and the implications of the structure on FLAG epitope binding are described as a first step in the development of a tool for the structural and biophysical study of membrane proteins.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 September 1; 62(Pt 9): 835–839. Published online 2006 August 18. doi: 10.1107/S1744309106029125
- PMCID:
- PMC2242885
Sue A. Roberts, David C. Hyatt, Jerry E. Honts, Liming Changchien, Gladys F. Maley, Frank Maley, William R. Montfort
Mutation of Tyr94 of E. coli thymidylate synthase to phenylalanine leads to a protein with k
cat reduced by a factor of 400. The Y94F structure is essentially identical to the wild-type structure, which is consistent with a catalytic role for the phenolic OH.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 September 1; 62(Pt 9): 840–843. Published online 2006 August 18. doi: 10.1107/S1744309106029691
- PMCID:
- PMC2242863
Liqing Chen, Yujun Wang, David Wells, Diana Toh, Hunt Harold, Jing Zhou, Enrico DiGiammarino, Edward J. Meehan
The crystal structure of the SH3 domain of human osteoclast-stimulating factor has been determined and refined to the ultrahigh resolution of 1.07 Å. The structure at atomic resolution provides an accurate framework for structure-based design of its inhibitors.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 September 1; 62(Pt 9): 844. Published online 2006 August 18. doi: 10.1107/S1744309106030004
- PMCID:
- PMC2242886
Louise Lyhne-Iversen, Timothy J. Hobley, Svend G. Kaasgaard, Pernille Harris
The structure of an uncomplexed form of α-amylase from B. halmapalus is compared with a form in which maltose, glucose and a nonasaccharide derived from acarbose and maltose are bound.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 September 1; 62(Pt 9): 849–854. Published online 2006 August 26. doi: 10.1107/S174430910603096X
- PMCID:
- PMC2242873
Noboru Nakano, Nobuo Okazaki, Shinya Satoh, Koji Takio, Seiki Kuramitsu, Akeo Shinkai, Shigeyuki Yokoyama
The crystal structure of the stand-alone RAM domain from T. thermophilus HB8 has been determined at 2.4 Å resolution. The structure revealed that five dimers are arranged to form a ring.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 September 1; 62(Pt 9): 855–860. Published online 2006 August 26. doi: 10.1107/S1744309106031150
- PMCID:
- PMC2242884
Crystallization Communications
Pietro Roversi, Steven Johnson, Terry Field, Janet E. Deane, Edouard E. Galyov, Susan M. Lea
A construct consisting of residues 10–310 of mature BipD, a component of the B. pseudomallei type III secretion system, has been crystallized. Native BipD crystals and SeMet and K2PtCl4 derivative crystals have undergone preliminary crystallographic analysis.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 September 1; 62(Pt 9): 861–864. Published online 2006 August 11. doi: 10.1107/S1744309106027035
- PMCID:
- PMC1894745
Steven Johnson, Pietro Roversi, Marianela Espina, Janet E. Deane, Susan Birket, William D. Picking, Ariel Blocker, Wendy L. Picking, Susan M. Lea
IpaD, the putative needle-tip protein of the S. flexneri type III secretion system, has been crystallized in a variety of crystal forms using in-drop proteolysis. Native and selenomethionine-labelled data collection and preliminary analyses are reported.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 September 1; 62(Pt 9): 865–868. Published online 2006 August 11. doi: 10.1107/S1744309106027047
- PMCID:
- PMC1894744
Insaf A. Qureshi, Dhruv K. Sethi, Dinakar M. Salunke
A 24 kDa protein was purified from the seeds of L. sativus by ammonium sulfate fractionation and ion-exchange chromatography. Crystals were obtained by the hanging-drop vapour-diffusion method.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 September 1; 62(Pt 9): 869–872. Published online 2006 August 11. doi: 10.1107/S1744309106028077
- PMCID:
- PMC2242876
Mohd. Akif, Yusuf Akhter, Seyed E. Hasnain, Shekhar C. Mande
The CRP/FNR family transcription factor from M. tuberculosis H37Rv has been crystallized in space group P212121 in the absence of cAMP. The crystals show the presence of a dimeric molecule in the asymmetric unit.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 September 1; 62(Pt 9): 873–875. Published online 2006 August 11. doi: 10.1107/S1744309106027977
- PMCID:
- PMC2242880
Eloise Mastrangelo, Michela Bollati, Mario Milani, Nadège Brisbarre, Xavier de Lamballerie, Bruno Coutard, Bruno Canard, Alexander Khromykh, Martino Bolognesi
The C-terminal 440 amino acids of the NS3 protein from Kunjin virus (Flaviviridae) code for a helicase. The protein has been overexpressed and crystallized. Characterization of the isolated monoclinic crystal form and diffraction data (at 3.0 Å resolution) are presented, together with a preliminary molecular-replacement solution.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 September 1; 62(Pt 9): 876–879. Published online 2006 August 11. doi: 10.1107/S1744309106028776
- PMCID:
- PMC2242862
Máximo Barreras, Mario A. Bianchet, Luis Ielpi
Crystallization of a membrane-associated glucuronosyltransferase.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 September 1; 62(Pt 9): 880–883. Published online 2006 August 11. doi: 10.1107/S1744309106028764
- PMCID:
- PMC2242869
Adeline Goulet, Silvia Spinelli, Valérie Campanacci, Sophie Porciero, Stéphanie Blangy, Roger A. Garrett, Herman van Tilbeurgh, Nicolas Leulliot, Tamara Basta, David Prangishvili, Christian Cambillau
Crystals of S. islandicus filamentous virus (SIFV) protein 14 have been grown at 293 K. Crystals belong to space group P6222 or P6422 and diffract to a resolution of 2.95 Å.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 September 1; 62(Pt 9): 884–886. Published online 2006 August 11. doi: 10.1107/S1744309106029150
- PMCID:
- PMC2242861
Neelakshi Gohain, Linda S. Thomashow, Dmitri V. Mavrodi, Wulf Blankenfeldt
PhzM, an S-adenosylmethionine-dependent methyltransferase enzyme that catalyzes a reaction involved in the biosynthesis of pyocyanin in P. aeruginosa, was cloned, overexpressed and crystallized. Data collection from native and selenomethionine-labelled crystals is reported.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 September 1; 62(Pt 9): 887–890. Published online 2006 August 11. doi: 10.1107/S1744309106029149
- PMCID:
- PMC2242881
Mika K. Rantanen, Lari Lehtiö, Lakshmi Rajagopal, Craig E. Rubens, Adrian Goldman
Two S. agalactiae proteins, the inorganic pyrophosphatase and the serine/threonine phosphatase, were crystallized and diffraction data were collected and processed from these crystals. The data from the two protein crystals extended to 2.80 and 2.65 Å, respectively.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 September 1; 62(Pt 9): 891–894. Published online 2006 August 11. doi: 10.1107/S174430910602954X
- PMCID:
- PMC2242878
Petra Wollmann, Kornelius Zeth
The periplasmic stress protein RseB from E. coli was cloned, expressed and crystallized. Crystallographic data are presented and structure solution using the multiple isomorphous replacement approach (MIR) is in progress.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 September 1; 62(Pt 9): 895–898. Published online 2006 August 18. doi: 10.1107/S1744309106027825
- PMCID:
- PMC2242865
Hiroyuki Morita, Shin Kondo, Tsuyoshi Abe, Hiroshi Noguchi, Shigetoshi Sugio, Ikuro Abe, Toshiyuki Kohno
Pentaketide chromone synthase from A. arborescens has been overexpressed in E. coli, purified and crystallized. Diffraction data have been collected to 1.6 Å.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 September 1; 62(Pt 9): 899–901. Published online 2006 August 18. doi: 10.1107/S174430910602968X
- PMCID:
- PMC2242872
Shun-ichi Tanaka, Kenji Saito, Hyongi Chon, Hiroyoshi Matsumura, Yuichi Koga, Kazufumi Takano, Shigenori Kanaya
Crystallization of and preliminary crystallographic studies on an active-site mutant of pro-Tk-subtilisin from the hyperthermophilic archaeon T. kodakaraensis were performed.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 September 1; 62(Pt 9): 902–905. Published online 2006 August 18. doi: 10.1107/S1744309106030454
- PMCID:
- PMC2242867
Masayuki Miyazawa, Kengo Kitadokoro, Shigeki Kamitani, Hiroaki Shime, Yasuhiko Horiguchi
The C-terminal catalytic domain of P. multocida toxin, which is the virulence factor of the organism in P. multocida, has been expressed, purified and subsequently crystallized using the sitting-drop vapour-diffusion technique.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 September 1; 62(Pt 9): 906–908. Published online 2006 August 18. doi: 10.1107/S1744309106030375
- PMCID:
- PMC2242868
Marina N. Vassylyeva, Hiroyuki Mori, Tomoya Tsukazaki, Shigeyuki Yokoyama, Tahir H. Tahirov, Koreaki Ito, Dmitry G. Vassylyev
The SecA ATPase from T. thermophilus was cloned, expressed, purified and crystallized. Complete diffraction data sets were collected for two crystal forms at 2.8 and 3.5 Å resolution, respectively. Determination of the structure is now in progress.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 September 1; 62(Pt 9): 909–912. Published online 2006 August 18. doi: 10.1107/S1744309106030843
- PMCID:
- PMC2242882
M. Selvaraj, N. S. Singh, Siddhartha Roy, R. Sangeetha, Umesh Varshney, M. Vijayan
The peptidyl-tRNA hydrolase from M. tuberculosis has been crystallized in three closely related forms, two orthorhombic and one monoclinic, and X-ray diffraction data have been collected from them.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 September 1; 62(Pt 9): 913–915. Published online 2006 August 26. doi: 10.1107/S1744309106031125
- PMCID:
- PMC2242860
Chueh-Yuan Kuo, Yue-Jin Wu, Yin-Cheng Hsieh, Hong-Hsiang Guan, Huei-Ju Tsai, Yi-Hung Lin, Yen-Chieh Huang, Ming-Yih Liu, Yaw-Kuen Li, Chun-Jung Chen
The crystallization of B. cereus chitinase is reported.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 September 1; 62(Pt 9): 916–919. Published online 2006 August 26. doi: 10.1107/S1744309106031423
- PMCID:
- PMC2242883
Kjell O. Håkansson, Henrik Østergaard, Jakob R. Winther
Glutathionylated glutaredoxin Grx1p from yeast was crystallized, along with a yellow fluorescent protein–glutaredoxin fusion protein.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 September 1; 62(Pt 9): 920–922. Published online 2006 August 26. doi: 10.1107/S1744309106031216
- PMCID:
- PMC2242864
Huita C. Matozo, Alessandro S. Nascimento, Maria A. M. Santos, Rodolfo Iuliano, Alfredo Fusco, Igor Polikarpov
In this study, the catalytic domain of rat protein tyrosine phosphatase η was produced in Escherichia coli in soluble form and purified to homogeneity. Crystals were obtained by the hanging-drop vapour-diffusion method.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 September 1; 62(Pt 9): 923–925. Published online 2006 August 26. doi: 10.1107/S1744309106031058
- PMCID:
- PMC2242866
Miguel Montes, Kerry L. Fuson, R. Bryan Sutton, J. Justin Robert
Human synaptotagmin C2A-C2B has been expressed as a glutathione-S-transferase fusion protein in Escherichia coli. The purification, crystallization and preliminary X-ray analysis of this protein are reported here.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 September 1; 62(Pt 9): 926–929. Published online 2006 August 26. doi: 10.1107/S1744309106029253
- PMCID:
- PMC2242877
D. Aragão, A. R. Marques, C. Frazão, F. J. Enguita, M. A. Carrondo, A. M. Fialho, I. Sá-Correia, E. P. Mitchell
Glucose-1-phosphate uridylyltransferase (UgpG) from S. elodea ATCC 31461 has been expressed, purified and crystallized. Seven crystal forms were obtained and characterized to a maximum resolution of 2.65 Å.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 September 1; 62(Pt 9): 930–934. Published online 2006 August 26. doi: 10.1107/S1744309106030107
- PMCID:
- PMC2242879
Ricardo Cabrera, Andrés Caniuguir, Andre L. B. Ambrosio, Victoria Guixé, Richard C. Garratt, Jorge Babul
The phosphofructokinase-2 enzyme from E. coli was crystallized in its tetrameric inhibited form. This is the only member of the ribokinase family known to suffer a transition from dimer to tetramer in response to the allosteric binding of MgATP.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 September 1; 62(Pt 9): 935–937. Published online 2006 August 26. doi: 10.1107/S1744309106032246
- PMCID:
- PMC2242871
Liam Worrall, Malcolm D. Walkinshaw
Crystals of the C-terminal 10 kDa lid subdomain from the C. elegans chaperone Hsp70 have been obtained that diffract X-rays to ~3.5 Å and belong to space group I212121. Analysis of X-ray data and initial heavy-atom phasing reveals 24 monomers in the asymmetric unit related by 432 non-crystallographic symmetry.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 September 1; 62(Pt 9): 938–943. Published online 2006 August 26. doi: 10.1107/S1744309106032064
- PMCID:
- PMC2242859


