PMCCPMCCPMCC

Search tips
Search criteria 

Advanced
Logo of actafjournal home pageInternational Union of Crystallographysearchsubscribearticle submissionthis issue
 
This journal provides early access to some articles.

Volume 61(Pt 10);  2005 October 1

Protein Structure Communications

Augen A. Pioszak, Kazutaka Murayama, Noriko Nakagawa, Akio Ebihara, Seiki Kuramitsu, Mikako Shirouzu, Shigeyuki Yokoyama

Three structures of a putative RNA 5-methyluridine methyltransferase from T. thermophilus, including its complex with S-adenosyl-l-homocysteine, are presented. The structures reveal the mode of cofactor binding, architecture of the putative active site, and the presence of a deep cleft adjacent to the active site that may bind RNA.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 October 1; 61(Pt 10): 867–874. Published online 2005 September 30. doi: 10.1107/S1744309105029842
PMCID:
PMC1991318

Crystallization Communications

Daniel Ken Inaoka, Eizo Takashima, Arihiro Osanai, Hironari Shimizu, Takeshi Nara, Takashi Aoki, Shigeharu Harada, Kiyoshi Kita

The Trypanosoma cruzi dihydroorotate dehydrogenase, a key enzyme in pyrimidine de novo biosynthesis and redox homeostasis, was crystallized in complex with its first reaction product, orotate.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 October 1; 61(Pt 10): 875–878. Published online 2005 September 13. doi: 10.1107/S174430910502659X
PMCID:
PMC1991314
G. D. E. Beaven, P. T. Erskine, J. N. Wright, F. Mohammed, R. Gill, S. P. Wood, J. Vernon, K. P. Giese, J. B. Cooper

Recombinant squid calexcitin has been crystallized using the hanging-drop vapour-diffusion technique in the orthorhombic space group P212121.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 October 1; 61(Pt 10): 879–881. Published online 2005 September 13. doi: 10.1107/S1744309105026758
PMCID:
PMC1991304
D. P. Marchi-Salvador, L. B. Silveira, A. M. Soares, M. R. M. Fontes

A new myotoxic Lys49-phospholipase from B. moojeni has been crystallized and X-ray diffraction data were collected to 2.18 Å resolution. Preliminary analysis indicates the presence of four molecules in the asymmetric unit, leading to a possible new oligomeric structure for Lys49-PLA2s.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 October 1; 61(Pt 10): 882–884. Published online 2005 September 13. doi: 10.1107/S174430910502717X
PMCID:
PMC1991306
Clare E. M. Stevenson, Nicolas Burton, Manuela Costa, Utpal Nath, Ray A. Dixon, Enrico S. Coen, David M. Lawson

An 8 kDa proteolytic fragment of the A. majus RADIALIS protein was crystallized and X-ray data were collected to 2 Å resolution.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 October 1; 61(Pt 10): 885–888. Published online 2005 September 13. doi: 10.1107/S1744309105027168
PMCID:
PMC1991320
Kyoung Hoon Kim, Hyung Jun Ahn, Do Jin Kim, Hyung Ho Lee, Jun-Yong Ha, Hye-Kyung Kim, Hye-Jin Yoon, Se Won Suh

Human agmatinase (Ala36–Val352) was overexpressed and crystallized, and X-ray diffraction data were collected to 2.49 Å.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 October 1; 61(Pt 10): 889–891. Published online 2005 September 13. doi: 10.1107/S1744309105027193
PMCID:
PMC1991308
Neratur K. Lokanath, Hitoshi Yamamoto, Emiko Matsunaga, Mitsuaki Sugahara, Naoki Kunishima

The putative GTPase PH0525 from P. horikoshii OT3 was crystallized using the microbatch method. Crystals were formed under two different conditions, providing two distinct crystal forms. Diffraction data from the two forms were measured to resolution limits of 2.30 and 2.40 Å and processed in space groups P21 and C2221, respectively.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 October 1; 61(Pt 10): 892–894. Published online 2005 September 13. doi: 10.1107/S1744309105027752
PMCID:
PMC1991311
Chomphunuch Songsiriritthigul, Jirundon Yuvaniyama, Robert C. Robinson, Archara Vongsuwan, Heino Prinz, Wipa Suginta

This article describes the high-level expression, purification and crystallization as well as preliminary X-ray diffraction study of a family 18 chitinase, chitinase A from V. carchariae.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 October 1; 61(Pt 10): 895–898. Published online 2005 September 13. doi: 10.1107/S1744309105027831
PMCID:
PMC1991324
Vincent Cura, Natacha Olieric, Alexandre Guichard, En-Duo Wang, Dino Moras, Gilbert Eriani, Jean Cavarelli

The wild-type editing CP1 domain of A. aeolicus leucyl-tRNA synthetase and two mutant CP1 domains have been overexpressed, purified and crystallized. X-ray diffraction data have been collected to 1.8 Å, which has enabled determination of the structures by molecular replacement.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 October 1; 61(Pt 10): 899–901. Published online 2005 September 13. doi: 10.1107/S1744309105028460
PMCID:
PMC1991315
Yan-You Wu, Ko-Hsin Chin, Chia-Cheng Chou, Cheng-Chung Lee, Hui-Lin Shr, Fei Philip Gao, Ping-Chiang Lyu, Andrew H.-J. Wang, Shan-Ho Chou

A DEDDh-type 3′-5′ oligoribonuclease from the plant pathogen X. campestris pv. campestris has been overexpressed in E. coli, purified and crystallized. The crystals diffracted to 2.1 Å with good quality.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 October 1; 61(Pt 10): 902–905. Published online 2005 September 30. doi: 10.1107/S1744309105027132
PMCID:
PMC1991326
Alessia Ruggiero, Maria Rosaria Ruocco, Pasquale Grimaldi, Paolo Arcari, Mariorosario Masullo, Adriana Zagari, Luigi Vitagliano

The thioredoxin reductase isolated from S. solfataricus has been crystallized. Diffraction data have been collected from the wild type and from the NADP-bound form of the enzyme to 1.80 and 1.95 Å, respectively. The structure of the thioredoxin reductase has been solved using MAD diffraction data.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 October 1; 61(Pt 10): 906–909. Published online 2005 September 30. doi: 10.1107/S1744309105027995
PMCID:
PMC1991316
Marcos Vicente de A. S. Navarro, Débora F. Vierira, Ronaldo A. P. Nagem, Ana Paula U. de Araújo, Maria Luiza V. Oliva, Richard C. Garratt

Crystallization and preliminary X-ray diffraction studies are reported for a novel Kunitz-type protease inhibitor from B. bauhinioides which contains no disulfide bridges.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 October 1; 61(Pt 10): 910–913. Published online 2005 September 30. doi: 10.1107/S1744309105028496
PMCID:
PMC1991323
Ramelito C. Agapay, Savvas N. Savvides, Gonzalez Van Driessche, Bart Devreese, Jozef Van Beeumen, Jaap A. Jongejan, Wilfred R. Hagen

A P. furiosus stand-alone RAM domain with hydrolytic activity has been cloned and expressed in E. coli. The purified protein was crystallized alone and with EPNP and PMSF, producing crystals that yield diffraction data to resolutions of 2.8, 2.2 and 2.8 Å, respectively.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 October 1; 61(Pt 10): 914–916. Published online 2005 September 30. doi: 10.1107/S1744309105028393
PMCID:
PMC1991312
Michael DiMattia, Lakshmanan Govindasamy, Hazel C. Levy, Brittney Gurda-Whitaker, Amy Kalina, Erik Kohlbrenner, John A. Chiorini, Robert McKenna, Nicholas Muzyczka, Sergei Zolotukhin, Mavis Agbandje-McKenna

The production, purification, crystallization and preliminary crystallographic analysis of empty adeno-associated virus serotype 5 capsids are reported.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 October 1; 61(Pt 10): 917–921. Published online 2005 September 30. doi: 10.1107/S1744309105028514
PMCID:
PMC1991325
Meitian Wang, Hetal N. Patel, Rebekka M. Wachter

The coral-derived cyan fluorescent protein dsFP483 has been crystallized and diffraction data were collected to 2.1 Å. A molecular-replacement solution is presented for 83% of the protein contents of the asymmetric unit.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 October 1; 61(Pt 10): 922–924. Published online 2005 September 30. doi: 10.1107/S1744309105028502
PMCID:
PMC1991309
Muriel Uhring, Gilbert Bey, Odile Lecompte, Jean Cavarelli, Dino Moras, Olivier Poch

The Walker-type ATPase PABY2304 of P. abyssi has been cloned, overexpressed, purified and crystallized. X-ray diffraction data from selenomethionine-derivative crystals have been collected to 2.6 Å. The structure has been solved by MAD techniques.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 October 1; 61(Pt 10): 925–927. Published online 2005 September 30. doi: 10.1107/S174430910502868X
PMCID:
PMC1991322
Taku Ohki, Nobuhiro Mizuno, Naoki Shibata, Masahiro Takeo, Seiji Negoro, Yoshiki Higuchi

Single crystals of 6-aminohexanoate-dimer hydrolase have been prepared by the sitting-drop vapour-diffusion method using ammonium sulfate as a precipitant. Diffraction data were collected from native and methylmercuric chloride derivative crystals to resolutions of 1.75 and 1.80 Å, respectively.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 October 1; 61(Pt 10): 928–930. Published online 2005 September 30. doi: 10.1107/S1744309105028812
PMCID:
PMC1991307
Abel Garcia-Pino, Remy Loris, Lode Wyns, Lieven Buts

The lectin from the Nigerian legume B. mildbraedii was crystallized in complex with Man(α1-2)Man and data were collected to a resolution of 1.90 Å using synchrotron radiation.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 October 1; 61(Pt 10): 931–934. Published online 2005 September 30. doi: 10.1107/S174430910502854X
PMCID:
PMC1991310
Richard Pokorny, Tobias Klar, Lars-Oliver Essen, Alfred Batschauer

Recombinant cryptochrome 3 from A. thaliana with FAD and MTHF cofactors has been crystallized using the hanging-drop vapour-diffusion technique in the orthorhombic space group P212121 and X-ray diffraction data were collected to 1.9 Å resolution.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 October 1; 61(Pt 10): 935–938. Published online 2005 September 30. doi: 10.1107/S1744309105028897
PMCID:
PMC1991327
Bernhard Loll, Anna Zawacka, Jacek Biesiadka, Cordula Petter, Christine Rückert, Wolfram Saenger, Barbara Uchanska-Ziegler, Andreas Ziegler

Crystallization of HLA-B*2704 in complex with two peptides.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 October 1; 61(Pt 10): 939–941. Published online 2005 September 30. doi: 10.1107/S1744309105029234
PMCID:
PMC1991317
Helena Wright, András L. Kiss, Zoltán Szeltner, László Polgár, Vilmos Fülöp

Acylaminoacyl peptidase from porcine liver has been crystallized. Data were collected to 3.4 Å from native crystals and a search for heavy-atom derivatives is in progress.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 October 1; 61(Pt 10): 942–944. Published online 2005 September 30. doi: 10.1107/S1744309105029222
PMCID:
PMC1991319
Manal A. Swairjo, Robert R. Reddy, Bobby Lee, Steven G. Van Lanen, Shannon Brown, Valérie de Crécy-Lagard, Dirk Iwata-Reuyl, Paul Schimmel

Structural informatics and modelling correctly predicted that substrate was required to obtain diffracting crystals of the first characterized nitrile oxidoreductase: the homododecameric QueF.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 October 1; 61(Pt 10): 945–948. Published online 2005 September 30. doi: 10.1107/S1744309105029246
PMCID:
PMC1991305
Lieven Buts, Natalie De Jonge, Remy Loris, Lode Wyns, Minh-Hoa Dao-Thi

The CcdA C-terminal domain was crystallized in complex with CcdB in two crystal forms that diffract to beyond 2.0 Å resolution.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 October 1; 61(Pt 10): 949–952. Published online 2005 September 30. doi: 10.1107/S1744309105029258
PMCID:
PMC1991321
Kristof Van Hecke, Koen Uytterhoeven, Sergey N. Mikhailov, Piet Herdewijn, Luc Van Meervelt

Crystallization of the Dickerson dodecamer d(CGCGAATT*CGCG) containing an extra ribose in a phosphodiester linkage is reported.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 October 1; 61(Pt 10): 953–955. Published online 2005 September 30. doi: 10.1107/S1744309105030381
PMCID:
PMC1991303
Youssef Ben Ammar, Soichi Takeda, Mitsuaki Sugawara, Masashi Miyano, Hidezo Mori, Shigeo Wakabayashi

Crystallization of the human CHP2–NHE1 binding domain complex.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 October 1; 61(Pt 10): 956–958. Published online 2005 September 30. doi: 10.1107/S1744309105030836
PMCID:
PMC1991313

Articles from Acta Crystallographica Section F: Structural Biology and Crystallization Communications are provided here courtesy of International Union of Crystallography