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Volume 74(23);  December 2008
Minireview
Evaluation of the Effect of Temperature on the Die-Off Rate for Cryptosporidium parvum Oocysts in Water, Soils, and Feces
X. Peng, T. Murphy, N. M. Holden
Appl Environ Microbiol. 2008 December; 74(23): 7101–7107. Published online 2008 October 10. doi: 10.1128/AEM.01442-08
PMCID:
PMC2592903
Full Text PDF–97K
Genetics and Molecular Biology
Characterization of a Second Rhodococcus erythropolis SQ1 3-Ketosteroid 9α-Hydroxylase Activity Comprising a Terminal Oxygenase Homologue, KshA2, Active with Oxygenase-Reductase Component KshB
R. van der Geize, G. I. Hessels, M. Nienhuis-Kuiper, L. Dijkhuizen
Appl Environ Microbiol. 2008 December; 74(23): 7197–7203. Published online 2008 October 3. doi: 10.1128/AEM.00888-08
PMCID:
PMC2592919
Abstract Full Text PDF–422K
Selective Removal of Aberrant Extender Units by a Type II Thioesterase for Efficient FR-008/Candicidin Biosynthesis in Streptomyces sp. Strain FR-008
Yongjun Zhou, Qingqing Meng, Delin You, Jialiang Li, Shi Chen, Dazhong Ding, Xiufen Zhou, Huchen Zhou, Linquan Bai, Zixin Deng
Appl Environ Microbiol. 2008 December; 74(23): 7235–7242. Published online 2008 October 3. doi: 10.1128/AEM.01012-08
PMCID:
PMC2592917
Abstract Full Text PDF–645K Supplementary Material
Differential Expression in Phanerochaete chrysosporium of Membrane-Associated Proteins Relevant to Lignin Degradation
Semarjit Shary, Alexander N. Kapich, Ellen A. Panisko, Jon K. Magnuson, Daniel Cullen, Kenneth E. Hammel
Appl Environ Microbiol. 2008 December; 74(23): 7252–7257. Published online 2008 October 10. doi: 10.1128/AEM.01997-08
PMCID:
PMC2592923
Abstract Full Text PDF–100K Supplementary Material
Generation of Bradyrhizobium japonicum Mutants with Increased N2O Reductase Activity by Selection after Introduction of a Mutated dnaQ Gene
Manabu Itakura, Kazufumi Tabata, Shima Eda, Hisayuki Mitsui, Kiriko Murakami, Junichi Yasuda, Kiwamu Minamisawa
Appl Environ Microbiol. 2008 December; 74(23): 7258–7264. Published online 2008 October 10. doi: 10.1128/AEM.01850-08
PMCID:
PMC2592905
Abstract Full Text PDF–523K Supplementary Material
Expression Profiles and Physiological Roles of Two Types of Molecular Chaperonins from the Hyperthermophilic Archaeon Thermococcus kodakarensis
Shinsuke Fujiwara, Ryohei Aki, Masaya Yoshida, Hiroki Higashibata, Tadayuki Imanaka, Wakao Fukuda
Appl Environ Microbiol. 2008 December; 74(23): 7306–7312. Published online 2008 October 3. doi: 10.1128/AEM.01245-08
PMCID:
PMC2592908
Abstract Full Text PDF–215K
Physiology and Biotechnology
SOD1, a New Kluyveromyces lactis Helper Gene for Heterologous Protein Secretion
S. Raimondi, E. Zanni, C. Talora, M. Rossi, C. Palleschi, D. Uccelletti
Appl Environ Microbiol. 2008 December; 74(23): 7130–7137. Published online 2008 October 3. doi: 10.1128/AEM.00955-08
PMCID:
PMC2592901
Abstract Full Text PDF–527K
Proteome-Based Comparative Analyses of Growth Stages Reveal New Cell Cycle-Dependent Functions in the Predatory Bacterium Bdellovibrio bacteriovorus
Mally Dori-Bachash, Bareket Dassa, Shmuel Pietrokovski, Edouard Jurkevitch
Appl Environ Microbiol. 2008 December; 74(23): 7152–7162. Published online 2008 October 3. doi: 10.1128/AEM.01736-08
PMCID:
PMC2592910
Abstract Full Text PDF–836K Supplementary Material
Regulation of Aromatic Alcohol Production in Candida albicans
Suman Ghosh, Bessie W. Kebaara, Audrey L. Atkin, Kenneth W. Nickerson
Appl Environ Microbiol. 2008 December; 74(23): 7211–7218. Published online 2008 October 3. doi: 10.1128/AEM.01614-08
PMCID:
PMC2592902
Abstract Full Text PDF–1.2M
Synthesis and Uptake of the Compatible Solutes Ectoine and 5-Hydroxyectoine by Streptomyces coelicolor A3(2) in Response to Salt and Heat Stresses
Jan Bursy, Anne U. Kuhlmann, Marco Pittelkow, Holger Hartmann, Mohamed Jebbar, Antonio J. Pierik, Erhard Bremer
Appl Environ Microbiol. 2008 December; 74(23): 7286–7296. Published online 2008 October 10. doi: 10.1128/AEM.00768-08
PMCID:
PMC2592907
Abstract Full Text PDF–809K
Microbial Biofilm Voltammetry: Direct Electrochemical Characterization of Catalytic Electrode-Attached Biofilms
Enrico Marsili, Janet B. Rollefson, Daniel B. Baron, Raymond M. Hozalski, Daniel R. Bond
Appl Environ Microbiol. 2008 December; 74(23): 7329–7337. Published online 2008 October 10. doi: 10.1128/AEM.00177-08
PMCID:
PMC2592900
Abstract Full Text PDF–1.2M Supplementary Material
Comparison of Electrode Reduction Activities of Geobacter sulfurreducens and an Enriched Consortium in an Air-Cathode Microbial Fuel Cell
Shun'ichi Ishii, Kazuya Watanabe, Soichi Yabuki, Bruce E. Logan, Yuji Sekiguchi
Appl Environ Microbiol. 2008 December; 74(23): 7348–7355. Published online 2008 October 3. doi: 10.1128/AEM.01639-08
PMCID:
PMC2592935
Abstract Full Text PDF–743K Supplementary Material
Inactivation of Efflux Pumps Abolishes Bacterial Biofilm Formation
Malin Kvist, Viktoria Hancock, Per Klemm
Appl Environ Microbiol. 2008 December; 74(23): 7376–7382. Published online 2008 October 3. doi: 10.1128/AEM.01310-08
PMCID:
PMC2592912
Abstract Full Text PDF–548K
Knockout of the Erythromycin Biosynthetic Cluster Gene, eryBI, Blocks Isoflavone Glucoside Bioconversion during Erythromycin Fermentations in Aeromicrobium erythreum but Not in Saccharopolyspora erythraea
Andrew R. Reeves, Ramya Seshadri, Igor A. Brikun, William H. Cernota, Melissa C. Gonzalez, J. Mark Weber
Appl Environ Microbiol. 2008 December; 74(23): 7383–7390. Published online 2008 October 3. doi: 10.1128/AEM.01759-08
PMCID:
PMC2592926
Abstract Full Text PDF–822K
Effect of Temperature on the Cannibalistic Behavior of Bacillus subtilis
Subir Kumar Nandy, Vinay Prasad, K. V. Venkatesh
Appl Environ Microbiol. 2008 December; 74(23): 7427–7430. Published online 2008 September 26. doi: 10.1128/AEM.00683-08
PMCID:
PMC2592941
Abstract Full Text PDF–516K
The Functional Quality of Soluble Recombinant Polypeptides Produced in Escherichia coli Is Defined by a Wide Conformational Spectrum
Mónica Martínez-Alonso, Nuria González-Montalbán, Elena García-Fruitós, Antonio Villaverde
Appl Environ Microbiol. 2008 December; 74(23): 7431–7433. Published online 2008 October 3. doi: 10.1128/AEM.01446-08
PMCID:
PMC2592911
Abstract Full Text PDF–735K
Secretion of Insulinotropic Proteins by Commensal Bacteria: Rewiring the Gut To Treat Diabetes
Faping Duan, Katherine L. Curtis, John C. March
Appl Environ Microbiol. 2008 December; 74(23): 7437–7438. Published online 2008 October 3. doi: 10.1128/AEM.01019-08
PMCID:
PMC2592943
Abstract Full Text PDF–216K Supplementary Material
HtrA Is Essential for Efficient Secretion of Recombinant Proteins by Lactococcus lactis
Kalpana Sriraman, Guhan Jayaraman
Appl Environ Microbiol. 2008 December; 74(23): 7442–7446. Published online 2008 October 3. doi: 10.1128/AEM.00638-08
PMCID:
PMC2592931
Abstract Full Text PDF–116K
Public Health Microbiology
Evidence for Growth of Enterococci in Municipal Oxidation Ponds, Obtained Using Antibiotic Resistance Analysis
Elaine Moriarty, Fariba Nourozi, Beth Robson, David Wood, Brent Gilpin
Appl Environ Microbiol. 2008 December; 74(23): 7204–7210. Published online 2008 October 3. doi: 10.1128/AEM.00341-08
PMCID:
PMC2592925
Abstract Full Text PDF–535K
Inferences about the Global Population Structures of Cryptosporidium parvum and Cryptosporidium hominis
Sultan Tanrıverdi, Alex Grinberg, Rachel M. Chalmers, Paul R. Hunter, Zorana Petrovic, Donna E. Akiyoshi, Eric London, Linghui Zhang, Saul Tzipori, James K. Tumwine, Giovanni Widmer
Appl Environ Microbiol. 2008 December; 74(23): 7227–7234. Published online 2008 October 3. doi: 10.1128/AEM.01576-08
PMCID:
PMC2592928
Abstract Full Text PDF–331K Supplementary Material
Quantification and Genotyping of Torque Teno Virus at a Wastewater Treatment Plant in Japan
Eiji Haramoto, Hiroyuki Katayama, Shinichiro Ohgaki
Appl Environ Microbiol. 2008 December; 74(23): 7434–7436. Published online 2008 October 3. doi: 10.1128/AEM.01605-08
PMCID:
PMC2592915
Abstract Full Text PDF–45K
Seagulls of the Berlengas Natural Reserve of Portugal as Carriers of Fecal Escherichia coli Harboring CTX-M and TEM Extended-Spectrum Beta-Lactamases
Patricia Poeta, Hajer Radhouani, Gilberto Igrejas, Alexandre Gonçalves, Carlos Carvalho, Jorge Rodrigues, Laura Vinué, Sergio Somalo, Carmen Torres
Appl Environ Microbiol. 2008 December; 74(23): 7439–7441. Published online 2008 October 3. doi: 10.1128/AEM.00949-08
PMCID:
PMC2592940
Abstract Full Text PDF–152K
International Comparison of Clinical, Bovine, and Environmental Escherichia coli O157 Isolates on the Basis of Shiga Toxin-Encoding Bacteriophage Insertion Site Genotypes
Joshua H. Whitworth, Narelle Fegan, Jasmin Keller, Kari S. Gobius, James L. Bono, Douglas R. Call, Dale D. Hancock, Thomas E. Besser
Appl Environ Microbiol. 2008 December; 74(23): 7447–7450. Published online 2008 October 10. doi: 10.1128/AEM.01190-08
PMCID:
PMC2592916
Abstract Full Text PDF–218K
Environmental Microbiology
Volatilization and Precipitation of Tellurium by Aerobic, Tellurite-Resistant Marine Microbes
Patrick R. L. Ollivier, Andrew S. Bahrou, Sarah Marcus, Talisha Cox, Thomas M. Church, Thomas E. Hanson
Appl Environ Microbiol. 2008 December; 74(23): 7163–7173. Published online 2008 October 10. doi: 10.1128/AEM.00733-08
PMCID:
PMC2592909
Abstract Full Text PDF–1.0M Supplementary Material
Acanthamoeba castellanii Promotes the Survival of Vibrio parahaemolyticus
Michelle A. Laskowski-Arce, Kim Orth
Appl Environ Microbiol. 2008 December; 74(23): 7183–7188. Published online 2008 October 10. doi: 10.1128/AEM.01332-08
PMCID:
PMC2592933
Abstract Full Text PDF–177K
Phylogenetic Relationships and Functional Genes: Distribution of a Gene (mnxG) Encoding a Putative Manganese-Oxidizing Enzyme in Bacillus Species
Lisa E. Mayhew, Elizabeth D. Swanner, Andy P. Martin, Alexis S. Templeton
Appl Environ Microbiol. 2008 December; 74(23): 7265–7271. Published online 2008 October 10. doi: 10.1128/AEM.00540-08
PMCID:
PMC2592937
Abstract Full Text PDF–739K
Effect of Permeate Drag Force on the Development of a Biofouling Layer in a Pressure-Driven Membrane Separation System
L. Eshed, S. Yaron, C. G. Dosoretz
Appl Environ Microbiol. 2008 December; 74(23): 7338–7347. Published online 2008 October 17. doi: 10.1128/AEM.00631-08
PMCID:
PMC2592929
Abstract Full Text PDF–2.4M
Microbial Ecology
Widespread Distribution and Identification of Eight Novel Microcystins in Antarctic Cyanobacterial Mats
Susanna A. Wood, Doug Mountfort, Andrew I. Selwood, Patrick T. Holland, Jonathan Puddick, S. Craig Cary
Appl Environ Microbiol. 2008 December; 74(23): 7243–7251. Published online 2008 October 10. doi: 10.1128/AEM.01243-08
PMCID:
PMC2592942
Abstract Full Text PDF–383K
Phenotype-Specific Bacterial Communities in the Cold-Water Coral Lophelia pertusa (Scleractinia) and Their Implications for the Coral's Nutrition, Health, and Distribution
Sven C. Neulinger, Johanna Järnegren, Martin Ludvigsen, Karin Lochte, Wolf-Christian Dullo
Appl Environ Microbiol. 2008 December; 74(23): 7272–7285. Published online 2008 October 10. doi: 10.1128/AEM.01777-08
PMCID:
PMC2592914
Abstract Full Text PDF–2.6M Supplementary Material
Substrate-Specific Clades of Active Marine Methylotrophs Associated with a Phytoplankton Bloom in a Temperate Coastal Environment
Josh D. Neufeld, Rich Boden, Hélène Moussard, Hendrik Schäfer, J. Colin Murrell
Appl Environ Microbiol. 2008 December; 74(23): 7321–7328. Published online 2008 October 10. doi: 10.1128/AEM.01266-08
PMCID:
PMC2592898
Abstract Full Text PDF–665K
Phaeobacter and Ruegeria Species of the Roseobacter Clade Colonize Separate Niches in a Danish Turbot (Scophthalmus maximus)-Rearing Farm and Antagonize Vibrio anguillarum under Different Growth Conditions
Cisse Hedegaard Porsby, Kristian Fog Nielsen, Lone Gram
Appl Environ Microbiol. 2008 December; 74(23): 7356–7364. Published online 2008 October 24. doi: 10.1128/AEM.01738-08
PMCID:
PMC2592939
Abstract Full Text PDF–523K
Comparative Characterization of the Microbial Diversities of an Artificial Microbialite Model and a Natural Stromatolite
Stephanie A. Havemann, Jamie S. Foster
Appl Environ Microbiol. 2008 December; 74(23): 7410–7421. Published online 2008 October 3. doi: 10.1128/AEM.01710-08
PMCID:
PMC2592906
Abstract Full Text PDF–1.8M Supplementary Material
Food Microbiology
Mechanism of Synergistic Inhibition of Listeria monocytogenes Growth by Lactic Acid, Monolaurin, and Nisin
Oleksandr Tokarskyy, Douglas L. Marshall
Appl Environ Microbiol. 2008 December; 74(23): 7126–7129. Published online 2008 September 26. doi: 10.1128/AEM.01292-08
PMCID:
PMC2592944
Abstract Full Text PDF–259K
Development and Implementation of a Multiplex Single-Nucleotide Polymorphism Genotyping Assay for Detection of Virulence-Attenuating Mutations in the Listeria monocytogenes Virulence-Associated Gene inlA
A. Van Stelten, K. K. Nightingale
Appl Environ Microbiol. 2008 December; 74(23): 7365–7375. Published online 2008 October 3. doi: 10.1128/AEM.01138-08
PMCID:
PMC2592936
Abstract Full Text PDF–1.1M Supplementary Material
Long-Term Fungal Inhibitory Activity of Water-Soluble Extracts of Phaseolus vulgaris cv. Pinto and Sourdough Lactic Acid Bacteria during Bread Storage
Rossana Coda, Carlo G. Rizzello, Franco Nigro, Maria De Angelis, Philip Arnault, Marco Gobbetti
Appl Environ Microbiol. 2008 December; 74(23): 7391–7398. Published online 2008 October 10. doi: 10.1128/AEM.01420-08
PMCID:
PMC2592913
Abstract Full Text PDF–373K
Comparative Analysis of Extracellular and Intracellular Proteomes of Listeria monocytogenes Strains Reveals a Correlation between Protein Expression and Serovar
Emilie Dumas, Bruno Meunier, Jean-Louis Berdagué, Christophe Chambon, Mickaël Desvaux, Michel Hébraud
Appl Environ Microbiol. 2008 December; 74(23): 7399–7409. Published online 2008 October 3. doi: 10.1128/AEM.00594-08
PMCID:
PMC2592921
Abstract Full Text PDF–1.5M Supplementary Material
Identification of Bacillus cereus Group Species Associated with Food Poisoning Outbreaks in British Columbia, Canada
Lorraine McIntyre, Kathryn Bernard, Daniel Beniac, Judith L. Isaac-Renton, David Craig Naseby
Appl Environ Microbiol. 2008 December; 74(23): 7451–7453. Published online 2008 October 10. doi: 10.1128/AEM.01284-08
PMCID:
PMC2592946
Abstract Full Text PDF–73K
Invertebrate Microbiology
Metalloprotease Vsm Is the Major Determinant of Toxicity for Extracellular Products of Vibrio splendidus
Johan Binesse, Claude Delsert, Denis Saulnier, Marie-Christine Champomier-Vergès, Monique Zagorec, Hélène Munier-Lehmann, Didier Mazel, Frédérique Le Roux
Appl Environ Microbiol. 2008 December; 74(23): 7108–7117. Published online 2008 October 3. doi: 10.1128/AEM.01261-08
PMCID:
PMC2592927
Abstract Full Text PDF–541K Supplementary Material
Relative Importance of Ixodes ricinus and Ixodes trianguliceps as Vectors for Anaplasma phagocytophilum and Babesia microti in Field Vole (Microtus agrestis) Populations
K. J. Bown, X. Lambin, G. R. Telford, N. H. Ogden, S. Telfer, Z. Woldehiwet, R. J. Birtles
Appl Environ Microbiol. 2008 December; 74(23): 7118–7125. Published online 2008 September 26. doi: 10.1128/AEM.00625-08
PMCID:
PMC2592922
Abstract Full Text PDF–245K
Variations in Ixodes ricinus Density and Borrelia Infections Associated with Cattle Introduced into a Woodland in The Netherlands
Fedor Gassner, Patrick Verbaarschot, Renate C. Smallegange, Jeroen Spitzen, Sipke E. Van Wieren, Willem Takken
Appl Environ Microbiol. 2008 December; 74(23): 7138–7144. Published online 2008 October 3. doi: 10.1128/AEM.00310-08
PMCID:
PMC2592899
Abstract Full Text PDF–487K Supplementary Material
Solubilization, Activation, and Insecticidal Activity of Bacillus thuringiensis Serovar thompsoni HD542 Crystal Proteins
Samir Naimov, Rumyana Boncheva, Rumyana Karlova, Stefan Dukiandjiev, Ivan Minkov, Ruud A. de Maagd
Appl Environ Microbiol. 2008 December; 74(23): 7145–7151. Published online 2008 October 3. doi: 10.1128/AEM.00752-08
PMCID:
PMC2592897
Abstract Full Text PDF–632K
Origin and Diversity of Metabolically Active Gut Bacteria from Laboratory-Bred Larvae of Manduca sexta (Sphingidae, Lepidoptera, Insecta)
Nicole Brinkmann, Rainer Martens, Christoph C. Tebbe
Appl Environ Microbiol. 2008 December; 74(23): 7189–7196. Published online 2008 October 10. doi: 10.1128/AEM.01464-08
PMCID:
PMC2592924
Abstract Full Text PDF–288K
Cloning and Heterologous Expression of Insecticidal-Protein-Encoding Genes from Photorhabdus luminescens TT01 in Enterobacter cloacae for Termite Control
Ruihua Zhao, Richou Han, Xuehong Qiu, Xun Yan, Li Cao, Xiuling Liu
Appl Environ Microbiol. 2008 December; 74(23): 7219–7226. Published online 2008 October 3. doi: 10.1128/AEM.00977-08
PMCID:
PMC2592930
Abstract Full Text PDF–397K
Methods
Quantification of Diatom and Dinoflagellate Biomasses in Coastal Marine Seawater Samples by Real-Time PCR
Anna Godhe, Maria E. Asplund, Karolina Härnström, V. Saravanan, Anuj Tyagi, Indrani Karunasagar
Appl Environ Microbiol. 2008 December; 74(23): 7174–7182. Published online 2008 October 10. doi: 10.1128/AEM.01298-08
PMCID:
PMC2592920
Abstract Full Text PDF–440K
Quantitative rRNA-Targeted Solution-Based Hybridization Assay Using Peptide Nucleic Acid Molecular Beacons
Xu Li, Eberhard Morgenroth, Lutgarde Raskin
Appl Environ Microbiol. 2008 December; 74(23): 7297–7305. Published online 2008 September 26. doi: 10.1128/AEM.01002-08
PMCID:
PMC2592938
Abstract Full Text PDF–496K Supplementary Material
PBAD-Based Shuttle Vectors for Functional Analysis of Toxic and Highly Regulated Genes in Pseudomonas and Burkholderia spp. and Other Bacteria
Dongru Qiu, F. Heath Damron, Takehiko Mima, Herbert P. Schweizer, Hongwei D. Yu
Appl Environ Microbiol. 2008 December; 74(23): 7422–7426. Published online 2008 October 10. doi: 10.1128/AEM.01369-08
PMCID:
PMC2592904
Abstract Full Text PDF–281K
Biodegradation
Influence of Soil Components on the Biodegradation of Benzene, Toluene, Ethylbenzene, and o-, m-, and p-Xylenes by the Newly Isolated Bacterium Pseudoxanthomonas spadix BD-a59
Jeong Myeong Kim, Ngoc Thuan Le, Bok Sil Chung, Jin Ho Park, Jin-Woo Bae, Eugene L. Madsen, Che Ok Jeon
Appl Environ Microbiol. 2008 December; 74(23): 7313–7320. Published online 2008 October 3. doi: 10.1128/AEM.01695-08
PMCID:
PMC2592918
Abstract Full Text PDF–480K
Errata
Magnetic Resonance Imaging of Structure, Diffusivity, and Copper Immobilization in a Phototrophic Biofilm
V. R. Phoenix, W. M. Holmes
Appl Environ Microbiol. 2008 December; 74(23): 7454. doi: 10.1128/AEM.02149-08
Corrects:
Appl Environ Microbiol. 2008 August; 74(15): 4934–4943.
PMCID:
PMC2592934
Correction PDF–18K Original Article
Insights into the Mode of Action of Chitosan as an Antibacterial Compound
Dina Raafat, Kristine von Bargen, Albert Haas, Hans-Georg Sahl
Appl Environ Microbiol. 2008 December; 74(23): 7455. doi: 10.1128/AEM.02290-08
Corrects:
Appl Environ Microbiol. 2008 June; 74(12): 3764–3773.
PMCID:
PMC2592932
Correction PDF–16K Original Article
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