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Volume 74(5);  March 2008
Minireviews
Enumeration of Salmonella Bacteria in Food and Feed Samples by Real-Time PCR for Quantitative Microbial Risk Assessment
Burkhard Malorny, Charlotta Löfström, Martin Wagner, Nadine Krämer, Jeffrey Hoorfar
Appl Environ Microbiol. 2008 March; 74(5): 1299–1304. Published online 2007 December 28. doi: 10.1128/AEM.02489-07
PMCID:
PMC2258648
Full Text PDF–192K
Molecular Ecology Techniques for the Study of Aerobic Methanotrophs
Ian R. McDonald, Levente Bodrossy, Yin Chen, J. Colin Murrell
Appl Environ Microbiol. 2008 March; 74(5): 1305–1315. Published online 2007 December 28. doi: 10.1128/AEM.02233-07
PMCID:
PMC2258629
Full Text PDF–189K
Genetics and Molecular Biology
Factors and Selenocysteine Insertion Sequence Requirements for the Synthesis of Selenoproteins from a Gram-Positive Anaerobe in Escherichia coli
Torsten Gursinsky, Daniel Gröbe, Angelika Schierhorn, Jana Jäger, Jan R. Andreesen, Brigitte Söhling
Appl Environ Microbiol. 2008 March; 74(5): 1385–1393. Published online 2007 December 28. doi: 10.1128/AEM.02238-07
PMCID:
PMC2258645
Abstract Full Text PDF–561K
Two Different Tetracycline Resistance Mechanisms, Plasmid-Carried tet(L) and Chromosomally Located Transposon-Associated tet(M), Coexist in Lactobacillus sakei Rits 9
Mohammed Salim Ammor, Miguel Gueimonde, Morten Danielsen, Monique Zagorec, Angela H. A. M. van Hoek, Clara G. de los Reyes-Gavilán, Baltasar Mayo, Abelardo Margolles
Appl Environ Microbiol. 2008 March; 74(5): 1394–1401. Published online 2008 January 11. doi: 10.1128/AEM.01463-07
PMCID:
PMC2258611
Abstract Full Text PDF–426K
Lipase Expression in Pseudomonas alcaligenes Is Under the Control of a Two-Component Regulatory System
Joanna Krzeslak, Gijs Gerritse, Ronald van Merkerk, Robbert H. Cool, Wim J. Quax
Appl Environ Microbiol. 2008 March; 74(5): 1402–1411. Published online 2008 January 11. doi: 10.1128/AEM.01632-07
PMCID:
PMC2258621
Abstract Full Text PDF–574K
Genetic Dissection of Tropodithietic Acid Biosynthesis by Marine Roseobacters
Haifeng Geng, Jesper Bartholin Bruhn, Kristian F. Nielsen, Lone Gram, Robert Belas
Appl Environ Microbiol. 2008 March; 74(5): 1535–1545. Published online 2008 January 11. doi: 10.1128/AEM.02339-07
PMCID:
PMC2258615
Abstract Full Text PDF–510K Supplementary Material
cadDX Operon of Streptococcus salivarius 57.I
Yi-Ywan M. Chen, C. W. Feng, C. F. Chiu, Robert A. Burne
Appl Environ Microbiol. 2008 March; 74(5): 1642–1645. Published online 2007 December 28. doi: 10.1128/AEM.01878-07
PMCID:
PMC2258612
Abstract Full Text PDF–249K
Enzymology and Protein Engineering
Protein Engineering of Toluene Monooxygenases for Synthesis of Chiral Sulfoxides
Roi Feingersch, Janna Shainsky, Thomas K. Wood, Ayelet Fishman
Appl Environ Microbiol. 2008 March; 74(5): 1555–1566. Published online 2008 January 11. doi: 10.1128/AEM.01849-07
PMCID:
PMC2258606
Abstract Full Text PDF–844K
Physiology and Biotechnology
A Rhodococcus qsdA-Encoded Enzyme Defines a Novel Class of Large-Spectrum Quorum-Quenching Lactonases
Stéphane Uroz, Phil M. Oger, Emilie Chapelle, Marie-Thérèse Adeline, Denis Faure, Yves Dessaux
Appl Environ Microbiol. 2008 March; 74(5): 1357–1366. Published online 2008 January 11. doi: 10.1128/AEM.02014-07
PMCID:
PMC2258624
Abstract Full Text PDF–2.5M Supplementary Material
Role of Campylobacter jejuni Respiratory Oxidases and Reductases in Host Colonization
Rebecca A. Weingarten, Jesse L. Grimes, Jonathan W. Olson
Appl Environ Microbiol. 2008 March; 74(5): 1367–1375. Published online 2008 January 11. doi: 10.1128/AEM.02261-07
PMCID:
PMC2258625
Abstract Full Text PDF–432K
Identification of Genes Affecting Hydrogen Sulfide Formation in Saccharomyces cerevisiae
Angela L. Linderholm, Carrie L. Findleton, Gagandeep Kumar, Yeun Hong, Linda F. Bisson
Appl Environ Microbiol. 2008 March; 74(5): 1418–1427. Published online 2008 January 11. doi: 10.1128/AEM.01758-07
PMCID:
PMC2258607
Abstract Full Text PDF–197K
NADH Availability Limits Asymmetric Biocatalytic Epoxidation in a Growing Recombinant Escherichia coli Strain
Bruno Bühler, Jin-Byung Park, Lars M. Blank, Andreas Schmid
Appl Environ Microbiol. 2008 March; 74(5): 1436–1446. Published online 2008 January 11. doi: 10.1128/AEM.02234-07
PMCID:
PMC2258638
Abstract Full Text PDF–578K
Degradation of Glyoxylate and Glycolate with ATP Synthesis by a Thermophilic Anaerobic Bacterium, Moorella sp. Strain HUC22-1
Shinsuke Sakai, Kentaro Inokuma, Yutaka Nakashimada, Naomichi Nishio
Appl Environ Microbiol. 2008 March; 74(5): 1447–1452. Published online 2007 December 14. doi: 10.1128/AEM.01421-07
PMCID:
PMC2258637
Abstract Full Text PDF–107K
Isolation and Characterization of Human Intestinal Bacteria Capable of Transforming the Dietary Carcinogen 2-Amino-1-Methyl-6-Phenylimidazo[4,5-b]Pyridine
Lynn Vanhaecke, Filip Vercruysse, Nico Boon, Willy Verstraete, Ilse Cleenwerck, Marjan De Wachter, Paul De Vos, Tom van de Wiele
Appl Environ Microbiol. 2008 March; 74(5): 1469–1477. Published online 2008 January 11. doi: 10.1128/AEM.02064-07
PMCID:
PMC2258610
Abstract Full Text PDF–342K
Vanadium Requirements and Uptake Kinetics in the Dinitrogen-Fixing Bacterium Azotobacter vinelandii
J. P. Bellenger, T. Wichard, A. M. L. Kraepiel
Appl Environ Microbiol. 2008 March; 74(5): 1478–1484. Published online 2008 January 11. doi: 10.1128/AEM.02236-07
PMCID:
PMC2258613
Abstract Full Text PDF–399K
Phenotypic and Proteomic Characterization of Multiply Antibiotic-Resistant Variants of Salmonella enterica Serovar Typhimurium Selected Following Exposure to Disinfectants
Kimon A. G. Karatzas, Luke P. Randall, Mark Webber, Laura J. V. Piddock, Tom J. Humphrey, Martin J. Woodward, Nick G. Coldham
Appl Environ Microbiol. 2008 March; 74(5): 1508–1516. Published online 2007 December 14. doi: 10.1128/AEM.01931-07
PMCID:
PMC2258635
Abstract Full Text PDF–290K Supplementary Material
Amyloid-Like Adhesins Produced by Floc-Forming and Filamentous Bacteria in Activated Sludge
Poul Larsen, Jeppe Lund Nielsen, Daniel Otzen, Per Halkjær Nielsen
Appl Environ Microbiol. 2008 March; 74(5): 1517–1526. Published online 2008 January 11. doi: 10.1128/AEM.02274-07
PMCID:
PMC2258628
Abstract Full Text PDF–548K
A Novel Gene, Encoding 6-Hydroxy-3-Succinoylpyridine Hydroxylase, Involved in Nicotine Degradation by Pseudomonas putida Strain S16
Hongzhi Tang, Shuning Wang, Lanying Ma, Xiangzhou Meng, Zixin Deng, Dake Zhang, Cuiqing Ma, Ping Xu
Appl Environ Microbiol. 2008 March; 74(5): 1567–1574. Published online 2008 January 18. doi: 10.1128/AEM.02529-07
PMCID:
PMC2258644
Abstract Full Text PDF–539K Supplementary Material
A Legionella pneumophila Peptidyl-Prolyl cis-trans Isomerase Present in Culture Supernatants Is Necessary for Optimal Growth at Low Temperatures
Maria A. Söderberg, Nicholas P. Cianciotto
Appl Environ Microbiol. 2008 March; 74(5): 1634–1638. Published online 2007 December 28. doi: 10.1128/AEM.02512-07
PMCID:
PMC2258609
Abstract Full Text PDF–333K
Teichoic Acid Glycosylation Mediated by gtcA Is Required for Phage Adsorption and Susceptibility of Listeria monocytogenes Serotype 4b
Ying Cheng, Nattawan Promadej, Jae-Won Kim, S. Kathariou
Appl Environ Microbiol. 2008 March; 74(5): 1653–1655. Published online 2008 January 11. doi: 10.1128/AEM.01773-07
PMCID:
PMC2258646
Abstract Full Text PDF–77K
Mycology
Molecular Analysis of Maltotriose Active Transport and Fermentation by Saccharomyces cerevisiae Reveals a Determinant Role for the AGT1 Permease
Sergio L. Alves, Jr., Ricardo A. Herberts, Claudia Hollatz, Debora Trichez, Luiz C. Miletti, Pedro S. de Araujo, Boris U. Stambuk
Appl Environ Microbiol. 2008 March; 74(5): 1494–1501. Published online 2008 January 18. doi: 10.1128/AEM.02570-07
PMCID:
PMC2258630
Abstract Full Text PDF–405K
Sexual Reproduction as the Cause of Heat Resistance in the Food Spoilage Fungus Byssochlamys spectabilis (Anamorph Paecilomyces variotii)
Jos Houbraken, János Varga, Emilia Rico-Munoz, Shawn Johnson, Robert A. Samson
Appl Environ Microbiol. 2008 March; 74(5): 1613–1619. Published online 2008 January 11. doi: 10.1128/AEM.01761-07
PMCID:
PMC2258620
Abstract Full Text PDF–475K
Public Health Microbiology
Molecular Structure and Transferability of Tn1546-Like Elements in Enterococcus faecium Isolates from Clinical, Sewage, and Surface Water Samples in Iran
M. Talebi, M. R. Pourshafie, M. Katouli, R. Möllby
Appl Environ Microbiol. 2008 March; 74(5): 1350–1356. Published online 2008 January 11. doi: 10.1128/AEM.02254-07
Correction in:
Appl Environ Microbiol. 2008 May; 74(9): 2932.
PMCID:
PMC2258649
Abstract Full Text PDF–459K Correction
Surface Response of Fluorine Polymer-Incorporated Resin Composites to Cariogenic Biofilm Adherence
Mariko Gyo, Toru Nikaido, Koichi Okada, Junichi Yamauchi, Junji Tagami, Khairul Matin
Appl Environ Microbiol. 2008 March; 74(5): 1428–1435. Published online 2008 January 11. doi: 10.1128/AEM.02039-07
PMCID:
PMC2258632
Abstract Full Text PDF–1.1M Supplementary Material
Prevalence and Abundance of Uncultivated Megasphaera-Like Bacteria in the Human Vaginal Environment
Marcela Zozaya-Hinchliffe, David H. Martin, Michael J. Ferris
Appl Environ Microbiol. 2008 March; 74(5): 1656–1659. Published online 2008 January 18. doi: 10.1128/AEM.02127-07
PMCID:
PMC2258643
Abstract Full Text PDF–845K
Molecular Detection of Enterocytozoon bieneusi and Identification of a Potentially Human-Pathogenic Genotype in Milk
John Hwa Lee
Appl Environ Microbiol. 2008 March; 74(5): 1664–1666. Published online 2008 January 11. doi: 10.1128/AEM.02110-07
PMCID:
PMC2258614
Abstract Full Text PDF–46K
Applicability of Phylogenetic Methods for Characterizing the Public Health Significance of Verocytotoxin-Producing Escherichia coli Strains
Kim Ziebell, Paulina Konczy, Irene Yong, Shelley Frost, Mariola Mascarenhas, Andrew M. Kropinski, Thomas S. Whittam, Susan C. Read, Mohamed A. Karmali
Appl Environ Microbiol. 2008 March; 74(5): 1671–1675. Published online 2007 December 28. doi: 10.1128/AEM.01619-07
PMCID:
PMC2258608
Abstract Full Text PDF–104K
Environmental Microbiology
Retrospective Study of Campylobacter Infection in a Zoological Collection
Maged M. Taema, James C. Bull, Shaheed K. Macgregor, Edmund J. Flach, Wayne S. Boardman, Andrew D. Routh
Appl Environ Microbiol. 2008 March; 74(5): 1332–1338. Published online 2007 December 28. doi: 10.1128/AEM.02060-07
PMCID:
PMC2258641
Abstract Full Text PDF–175K
Intracellular Copper Accumulation Enhances the Growth of Kineococcus radiotolerans during Chronic Irradiation
C. E. Bagwell, C. E. Milliken, S. Ghoshroy, D. A. Blom
Appl Environ Microbiol. 2008 March; 74(5): 1376–1384. Published online 2008 January 11. doi: 10.1128/AEM.02175-07
PMCID:
PMC2258627
Abstract Full Text PDF–654K
Mitochondrial cob and cox1 Genes and Editing of the Corresponding mRNAs in Dinophysis acuminata from Narragansett Bay, with Special Reference to the Phylogenetic Position of the Genus Dinophysis
Huan Zhang, Debashish Bhattacharya, Lucie Maranda, Senjie Lin
Appl Environ Microbiol. 2008 March; 74(5): 1546–1554. Published online 2007 December 28. doi: 10.1128/AEM.02103-07
PMCID:
PMC2258633
Abstract Full Text PDF–711K
Microbial Ecology
Changes in Bacterial and Archaeal Community Structure and Functional Diversity along a Geochemically Variable Soil Profile
Colleen M. Hansel, Scott Fendorf, Phillip M. Jardine, Christopher A. Francis
Appl Environ Microbiol. 2008 March; 74(5): 1620–1633. Published online 2008 January 11. doi: 10.1128/AEM.01787-07
PMCID:
PMC2258623
Abstract Full Text PDF–1.5M
Silver as a Residual Disinfectant To Prevent Biofilm Formation in Water Distribution Systems
Nadia Silvestry-Rodriguez, Kelly R. Bright, Donald C. Slack, Donald R. Uhlmann, Charles P. Gerba
Appl Environ Microbiol. 2008 March; 74(5): 1639–1641. Published online 2008 January 11. doi: 10.1128/AEM.02237-07
PMCID:
PMC2258619
Abstract Full Text PDF–51K
The Mucin Degrader Akkermansia muciniphila Is an Abundant Resident of the Human Intestinal Tract
Muriel Derrien, M. Carmen Collado, Kaouther Ben-Amor, Seppo Salminen, Willem M. de Vos
Appl Environ Microbiol. 2008 March; 74(5): 1646–1648. Published online 2007 December 14. doi: 10.1128/AEM.01226-07
PMCID:
PMC2258631
Abstract Full Text PDF–207K Supplementary Material
Geomicrobiology
Direct Identification of a Bacterial Manganese(II) Oxidase, the Multicopper Oxidase MnxG, from Spores of Several Different Marine Bacillus Species
Gregory J. Dick, Justin W. Torpey, Terry J. Beveridge, Bradley M. Tebo
Appl Environ Microbiol. 2008 March; 74(5): 1527–1534. Published online 2007 December 28. doi: 10.1128/AEM.01240-07
PMCID:
PMC2258647
Abstract Full Text PDF–481K Supplementary Material
Food Microbiology
Heavy-Metal and Benzalkonium Chloride Resistance of Listeria monocytogenes Isolates from the Environment of Turkey-Processing Plants
S. Mullapudi, R. M. Siletzky, S. Kathariou
Appl Environ Microbiol. 2008 March; 74(5): 1464–1468. Published online 2008 January 11. doi: 10.1128/AEM.02426-07
PMCID:
PMC2258618
Abstract Full Text PDF–101K Supplementary Material
Identification of Campylobacter jejuni Genes Involved in the Response to Acidic pH and Stomach Transit
Anne N. Reid, Reenu Pandey, Kiran Palyada, Hemant Naikare, Alain Stintzi
Appl Environ Microbiol. 2008 March; 74(5): 1583–1597. Published online 2008 January 11. doi: 10.1128/AEM.01507-07
PMCID:
PMC2258634
Abstract Full Text PDF–740K
Identification of Campylobacter jejuni Genes Contributing to Acid Adaptation by Transcriptional Profiling and Genome-Wide Mutagenesis
Anne N. Reid, Reenu Pandey, Kiran Palyada, Lisa Whitworth, Evgueni Doukhanine, Alain Stintzi
Appl Environ Microbiol. 2008 March; 74(5): 1598–1612. Published online 2008 January 11. doi: 10.1128/AEM.01508-07
PMCID:
PMC2258640
Abstract Full Text PDF–496K
Plant Microbiology
Detection of Plant-Modulated Alterations in Antifungal Gene Expression in Pseudomonas fluorescens CHA0 on Roots by Flow Cytometry
Patrice de Werra, Eric Baehler, Aurélie Huser, Christoph Keel, Monika Maurhofer
Appl Environ Microbiol. 2008 March; 74(5): 1339–1349. Published online 2007 December 28. doi: 10.1128/AEM.02126-07
PMCID:
PMC2258642
Abstract Full Text PDF–278K
Water Deficit as a Driver of the Mutualistic Relationship between the Fungus Trichoderma harzianum and Two Wheat Genotypes
Eduardo P. Donoso, Ramiro O. Bustamante, Margarita Carú, Hermann M. Niemeyer
Appl Environ Microbiol. 2008 March; 74(5): 1412–1417. Published online 2008 January 11. doi: 10.1128/AEM.02013-07
PMCID:
PMC2258622
Abstract Full Text PDF–265K
The Exotic Legume Tree Species Acacia holosericea Alters Microbial Soil Functionalities and the Structure of the Arbuscular Mycorrhizal Community
P. Remigi, A. Faye, A. Kane, M. Deruaz, J. Thioulouse, M. Cissoko, Y. Prin, A. Galiana, B. Dreyfus, R. Duponnois
Appl Environ Microbiol. 2008 March; 74(5): 1485–1493. Published online 2008 January 18. doi: 10.1128/AEM.02427-07
PMCID:
PMC2258654
Abstract Full Text PDF–735K
Invertebrate Microbiology
Bombyx mori Midgut Membrane Protein P252, Which Binds to Bacillus thuringiensis Cry1A, Is a Chlorophyllide-Binding Protein, and the Resulting Complex Has Antimicrobial Activity
Ganesh N. Pandian, Toshiki Ishikawa, Makoto Togashi, Yasuyuki Shitomi, Kohsuke Haginoya, Shuhei Yamamoto, Tadayuki Nishiumi, Hidetaka Hori
Appl Environ Microbiol. 2008 March; 74(5): 1324–1331. Published online 2008 January 11. doi: 10.1128/AEM.01901-07
PMCID:
PMC2258650
Abstract Full Text PDF–535K
Phylogenetic Characterization and Prevalence of “Spirobacillus cienkowskii,” a Red-Pigmented, Spiral-Shaped Bacterial Pathogen of Freshwater Daphnia Species
Jorge L. M. Rodrigues, Meghan A. Duffy, Alan J. Tessier, Dieter Ebert, Laurence Mouton, Thomas M. Schmidt
Appl Environ Microbiol. 2008 March; 74(5): 1575–1582. Published online 2008 January 11. doi: 10.1128/AEM.02438-07
PMCID:
PMC2258617
Abstract Full Text PDF–695K
Bacterial Communities of Bartonella-Positive Fleas: Diversity and Community Assembly Patterns
Ryan T. Jones, Katherine F. McCormick, Andrew P. Martin
Appl Environ Microbiol. 2008 March; 74(5): 1667–1670. Published online 2008 January 18. doi: 10.1128/AEM.02090-07
PMCID:
PMC2258626
Abstract Full Text PDF–309K
Methods
Marker Removal in Staphylococci via Cre Recombinase and Different lox Sites
Martina Leibig, Bernhard Krismer, Martina Kolb, Alexandra Friede, Friedrich Götz, Ralph Bertram
Appl Environ Microbiol. 2008 March; 74(5): 1316–1323. Published online 2007 December 28. doi: 10.1128/AEM.02424-07
PMCID:
PMC2258651
Abstract Full Text PDF–286K
Detection of Viable but Nonculturable Escherichia coli O157:H7 Bacteria in Drinking Water and River Water
Yanming Liu, Ainslie Gilchrist, Jing Zhang, Xing-Fang Li
Appl Environ Microbiol. 2008 March; 74(5): 1502–1507. Published online 2008 January 18. doi: 10.1128/AEM.02125-07
PMCID:
PMC2258616
Abstract Full Text PDF–318K
Rapid DNA Library Construction for Functional Genomic and Metagenomic Screening
Jonathan E. Schmitz, Anu Daniel, Mattias Collin, Raymond Schuch, Vincent A. Fischetti
Appl Environ Microbiol. 2008 March; 74(5): 1649–1652. Published online 2007 December 14. doi: 10.1128/AEM.01864-07
PMCID:
PMC2258639
Abstract Full Text PDF–251K
Quantification of the Detrimental Effect of a Single Primer-Template Mismatch by Real-Time PCR Using the 16S rRNA Gene as an Example
D. Bru, F. Martin-Laurent, L. Philippot
Appl Environ Microbiol. 2008 March; 74(5): 1660–1663. Published online 2008 January 11. doi: 10.1128/AEM.02403-07
PMCID:
PMC2258636
Abstract Full Text PDF–296K
Evolutionary and Genomic Microbiology
Metagenomics: Read Length Matters
K. Eric Wommack, Jaysheel Bhavsar, Jacques Ravel
Appl Environ Microbiol. 2008 March; 74(5): 1453–1463. Published online 2008 January 11. doi: 10.1128/AEM.02181-07
PMCID:
PMC2258652
Abstract Full Text PDF–493K
Articles from Applied and Environmental Microbiology are provided here courtesy of
American Society for Microbiology (ASM)