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Volume 73(23);  December 2007
Genetics and Molecular Biology
Expanding the Helicobacter pylori Genetic Toolbox: Modification of an Endogenous Plasmid for Use as a Transcriptional Reporter and Complementation Vector
Beth M. Carpenter, Timothy K. McDaniel, Jeannette M. Whitmire, Hanan Gancz, Silvia Guidotti, Stefano Censini, D. Scott Merrell
Appl Environ Microbiol. 2007 December; 73(23): 7506–7514. Published online 2007 October 5. doi: 10.1128/AEM.01084-07
PMCID:
PMC2168067
Abstract Full Text PDF–258K
Genome-Wide Screen of Salmonella Genes Expressed during Infection in Pigs, Using In Vivo Expression Technology
Yanyan Huang, Christopher L. Leming, Mitsu Suyemoto, Craig Altier
Appl Environ Microbiol. 2007 December; 73(23): 7522–7530. Published online 2007 October 5. doi: 10.1128/AEM.01481-07
PMCID:
PMC2168049
Abstract Full Text PDF–315K
Physiological and Transcriptional Responses of Saccharomyces cerevisiae to Zinc Limitation in Chemostat Cultures
Raffaele De Nicola, Lucie A. Hazelwood, Erik A. F. De Hulster, Michael C. Walsh, Theo A. Knijnenburg, Marcel J. T. Reinders, Graeme M. Walker, Jack T. Pronk, Jean-Marc Daran, Pascale Daran-Lapujade
Appl Environ Microbiol. 2007 December; 73(23): 7680–7692. Published online 2007 October 12. doi: 10.1128/AEM.01445-07
PMCID:
PMC2168061
Abstract Full Text PDF–428K Supplementary Material
Ubericin A, a Class IIa Bacteriocin Produced by Streptococcus uberis
Nicholas C. K. Heng, Grace A. Burtenshaw, Ralph W. Jack, John R. Tagg
Appl Environ Microbiol. 2007 December; 73(23): 7763–7766. Published online 2007 October 12. doi: 10.1128/AEM.01818-07
PMCID:
PMC2168051
Abstract Full Text PDF–129K Supplementary Material
Enzymology and Protein Engineering
Purification and Characterization of a Three-Component Salicylate 1-Hydroxylase from Sphingomonas sp. Strain CHY-1
Yves Jouanneau, Julien Micoud, Christine Meyer
Appl Environ Microbiol. 2007 December; 73(23): 7515–7521. Published online 2007 September 28. doi: 10.1128/AEM.01519-07
PMCID:
PMC2168081
Abstract Full Text PDF–124K
Purification and Characterization of Two Highly Thermophilic Alkaline Lipases from Thermosyntropha lipolytica
Moh'd A. Salameh, Juergen Wiegel
Appl Environ Microbiol. 2007 December; 73(23): 7725–7731. Published online 2007 October 12. doi: 10.1128/AEM.01509-07
PMCID:
PMC2168070
Abstract Full Text PDF–185K
CelAB, a Multifunctional Cellulase Encoded by Teredinibacter turnerae T7902T, a Culturable Symbiont Isolated from the Wood-Boring Marine Bivalve Lyrodus pedicellatus
Nathan A. Ekborg, Wendy Morrill, Adam M. Burgoyne, Li Li, Daniel L. Distel
Appl Environ Microbiol. 2007 December; 73(23): 7785–7788. Published online 2007 October 12. doi: 10.1128/AEM.00876-07
PMCID:
PMC2168062
Abstract Full Text PDF–126K
Physiology and Biotechnology
Hydrogen Peroxide-Dependent Uptake of Iodine by Marine Flavobacteriaceae Bacterium Strain C-21
Seigo Amachi, Koh Kimura, Yasuyuki Muramatsu, Hirofumi Shinoyama, Takaaki Fujii
Appl Environ Microbiol. 2007 December; 73(23): 7536–7541. Published online 2007 October 12. doi: 10.1128/AEM.01592-07
PMCID:
PMC2168056
Abstract Full Text PDF–196K
Identification of the Propionicin F Bacteriocin Immunity Gene (pcfI) and Development of a Food-Grade Cloning System for Propionibacterium freudenreichii
Dag Anders Brede, Sheba Lothe, Zhian Salehian, Therese Faye, Ingolf F. Nes
Appl Environ Microbiol. 2007 December; 73(23): 7542–7547. Published online 2007 October 12. doi: 10.1128/AEM.01023-07
PMCID:
PMC2168059
Abstract Full Text PDF–163K Supplementary Material
Effects of Disruption of Homocitrate Synthase Genes on Nostoc sp. Strain PCC 7120 Photobiological Hydrogen Production and Nitrogenase
Hajime Masukawa, Kazuhito Inoue, Hidehiro Sakurai
Appl Environ Microbiol. 2007 December; 73(23): 7562–7570. Published online 2007 October 12. doi: 10.1128/AEM.01160-07
PMCID:
PMC2168058
Abstract Full Text PDF–225K
Enhancement of Shiga Toxin Production in Enterohemorrhagic Escherichia coli Serotype O157:H7 by DNase Colicins
Hirono Toshima, Ayana Yoshimura, Kentaro Arikawa, Ayumi Hidaka, Jun Ogasawara, Atsushi Hase, Haruhiko Masaki, Yoshikazu Nishikawa
Appl Environ Microbiol. 2007 December; 73(23): 7582–7588. Published online 2007 October 12. doi: 10.1128/AEM.01326-07
PMCID:
PMC2168048
Abstract Full Text PDF–392K
Caulobacter crescentus as a Whole-Cell Uranium Biosensor
Nathan J. Hillson, Ping Hu, Gary L. Andersen, Lucy Shapiro
Appl Environ Microbiol. 2007 December; 73(23): 7615–7621. Published online 2007 September 28. doi: 10.1128/AEM.01566-07
PMCID:
PMC2168040
Abstract Full Text PDF–273K Supplementary Material
Improvement of NADPH-Dependent Bioconversion by Transcriptome-Based Molecular Breeding
Makoto Hibi, Hiromi Yukitomo, Mikito Ito, Hideo Mori
Appl Environ Microbiol. 2007 December; 73(23): 7657–7663. Published online 2007 October 5. doi: 10.1128/AEM.01754-07
PMCID:
PMC2168071
Abstract Full Text PDF–371K Supplementary Material
TiO2 Photocatalysis Causes DNA Damage via Fenton Reaction-Generated Hydroxyl Radicals during the Recovery Period
Gaëtan Gogniat, Sam Dukan
Appl Environ Microbiol. 2007 December; 73(23): 7740–7743. Published online 2007 October 12. doi: 10.1128/AEM.01079-07
PMCID:
PMC2168052
Abstract Full Text PDF–99K
Nisin-Controlled Extracellular Production of Interleukin-2 in Lactococcus lactis Strains, without the Requirement for a Signal Peptide Sequence
Antonio Fernández, Juan M. Rodríguez, Roy J. Bongaerts, Michael J. Gasson, Nikki Horn
Appl Environ Microbiol. 2007 December; 73(23): 7781–7784. Published online 2007 September 28. doi: 10.1128/AEM.01247-07
Correction in:
Appl Environ Microbiol. 2008 March; 74(6): 1959.
PMCID:
PMC2168050
Abstract Full Text PDF–79K Correction
The Listeria monocytogenes Homolog of the Escherichia coli era Gene Is Involved in Adhesion to Inert Surfaces
Frédéric Auvray, Danielle Chassaing, Cécile Duprat, Brigitte Carpentier
Appl Environ Microbiol. 2007 December; 73(23): 7789–7792. Published online 2007 October 5. doi: 10.1128/AEM.01157-07
PMCID:
PMC2168078
Abstract Full Text PDF–131K
Identification of a Malate Chemoreceptor in Pseudomonas aeruginosa by Screening for Chemotaxis Defects in an Energy Taxis-Deficient Mutant
Carolina Alvarez-Ortega, Caroline S. Harwood
Appl Environ Microbiol. 2007 December; 73(23): 7793–7795. Published online 2007 October 12. doi: 10.1128/AEM.01898-07
PMCID:
PMC2168054
Abstract Full Text PDF–93K
Expression of Mycoplasma Proteins Carrying an Affinity Tag in M. pneumoniae Allows Rapid Purification and Circumvents Problems Related to the Aberrant Genetic Code
Sebastian R. Schmidl, Claudine Hames, Jörg Stülke
Appl Environ Microbiol. 2007 December; 73(23): 7799–7801. Published online 2007 October 12. doi: 10.1128/AEM.01861-07
PMCID:
PMC2168039
Abstract Full Text PDF–75K
Public Health Microbiology
Role of Iron in Human Serum Resistance of the Clinical and Environmental Vibrio vulnificus Genotypes
Ryan W. Bogard, James D. Oliver
Appl Environ Microbiol. 2007 December; 73(23): 7501–7505. Published online 2007 October 12. doi: 10.1128/AEM.01551-07
Correction in:
Appl Environ Microbiol. 2008 May; 74(10): 3322.
PMCID:
PMC2168077
Abstract Full Text PDF–79K Correction
Enhanced UV Inactivation of Adenoviruses under Polychromatic UV Lamps
Karl G. Linden, Jeanette Thurston, Raymond Schaefer, James P. Malley, Jr.
Appl Environ Microbiol. 2007 December; 73(23): 7571–7574. Published online 2007 October 12. doi: 10.1128/AEM.01587-07
PMCID:
PMC2168074
Abstract Full Text PDF–144K
Detection of Salmonella enterica Subpopulations by Phenotype Microarray Antibiotic Resistance Patterns
Jean Guard-Bouldin, Cesar A. Morales, Jonathan G. Frye, Richard K. Gast, Michael Musgrove
Appl Environ Microbiol. 2007 December; 73(23): 7753–7756. Published online 2007 October 26. doi: 10.1128/AEM.01228-07
PMCID:
PMC2168045
Abstract Full Text PDF–54K Supplementary Material
Environmental Microbiology
Different Genotypes of Anatoxin-Producing Cyanobacteria Coexist in the Tarn River, France
Sabrina Cadel-Six, Caroline Peyraud-Thomas, Luc Brient, Nicole Tandeau de Marsac, Rosmarie Rippka, Annick Méjean
Appl Environ Microbiol. 2007 December; 73(23): 7605–7614. Published online 2007 October 12. doi: 10.1128/AEM.01225-07
PMCID:
PMC2168053
Abstract Full Text PDF–770K Supplementary Material
Novel Cryptosporidium Genotype in Wild Australian Mice (Mus domesticus)
Colin Foo, Julianne Farrell, Annika Boxell, Ian Robertson, Una M. Ryan
Appl Environ Microbiol. 2007 December; 73(23): 7693–7696. Published online 2007 October 5. doi: 10.1128/AEM.00848-07
PMCID:
PMC2168042
Abstract Full Text PDF–105K
Sequence Characterization and Comparative Analysis of Three Plasmids Isolated from Environmental Vibrio spp.
Tracy H. Hazen, Dongying Wu, Jonathan A. Eisen, Patricia A. Sobecky
Appl Environ Microbiol. 2007 December; 73(23): 7703–7710. Published online 2007 October 5. doi: 10.1128/AEM.01577-07
PMCID:
PMC2168046
Abstract Full Text PDF–625K
Identification of a Chlorobenzene Reductive Dehalogenase in Dehalococcoides sp. Strain CBDB1
Lorenz Adrian, Jan Rahnenführer, Johan Gobom, Tina Hölscher
Appl Environ Microbiol. 2007 December; 73(23): 7717–7724. Published online 2007 October 12. doi: 10.1128/AEM.01649-07
PMCID:
PMC2168065
Abstract Full Text PDF–253K
Microbial Ecology
Metagenomic Characterization of Chesapeake Bay Virioplankton
Shellie R. Bench, Thomas E. Hanson, Kurt E. Williamson, Dhritiman Ghosh, Mark Radosovich, Kui Wang, K. Eric Wommack
Appl Environ Microbiol. 2007 December; 73(23): 7629–7641. Published online 2007 October 5. doi: 10.1128/AEM.00938-07
PMCID:
PMC2168038
Abstract Full Text PDF–1.1M Supplementary Material
Culture-Dependent and -Independent Characterization of Microbial Communities Associated with a Shallow Submarine Hydrothermal System Occurring within a Coral Reef off Taketomi Island, Japan
Hisako Hirayama, Michinari Sunamura, Ken Takai, Takuro Nunoura, Takuro Noguchi, Hanako Oida, Yasuo Furushima, Hiroyuki Yamamoto, Tamotsu Oomori, Koki Horikoshi
Appl Environ Microbiol. 2007 December; 73(23): 7642–7656. Published online 2007 October 5. doi: 10.1128/AEM.01258-07
PMCID:
PMC2168063
Abstract Full Text PDF–1.4M
Molecular Analysis of the Diversity of Sulfate-Reducing and Sulfur-Oxidizing Prokaryotes in the Environment, Using aprA as Functional Marker Gene
Birte Meyer, Jan Kuever
Appl Environ Microbiol. 2007 December; 73(23): 7664–7679. Published online 2007 October 5. doi: 10.1128/AEM.01272-07
PMCID:
PMC2168068
Abstract Full Text PDF–885K Supplementary Material
Microarray Analysis of Escherichia coli Strains from Interstitial Beach Waters of Lake Huron (Canada)
T. Kon, S. C. Weir, J. T. Trevors, H. Lee, J. Champagne, L. Meunier, R. Brousseau, L. Masson
Appl Environ Microbiol. 2007 December; 73(23): 7757–7758. Published online 2007 September 21. doi: 10.1128/AEM.01333-07
PMCID:
PMC2168082
Abstract Full Text PDF–145K
Intestinal Integrity and Akkermansia muciniphila, a Mucin-Degrading Member of the Intestinal Microbiota Present in Infants, Adults, and the Elderly
M. Carmen Collado, Muriel Derrien, Erika Isolauri, Willem M. de Vos, Seppo Salminen
Appl Environ Microbiol. 2007 December; 73(23): 7767–7770. Published online 2007 October 12. doi: 10.1128/AEM.01477-07
PMCID:
PMC2168041
Abstract Full Text PDF–73K
Effect of CO2 on Colony Development by Bifidobacterium Species
Shinji Kawasaki, Masahiro Nagasaku, Tsuyoshi Mimura, Hitomi Katashima, Susumu Ijyuin, Takumi Satoh, Youichi Niimura
Appl Environ Microbiol. 2007 December; 73(23): 7796–7798. Published online 2007 October 5. doi: 10.1128/AEM.01163-07
PMCID:
PMC2168075
Abstract Full Text PDF–113K
Food Microbiology
Variability of Total and Pathogenic Vibrio parahaemolyticus Densities in Northern Gulf of Mexico Water and Oysters
A. M. Zimmerman, A. DePaola, J. C. Bowers, J. A. Krantz, J. L. Nordstrom, C. N. Johnson, D. J. Grimes
Appl Environ Microbiol. 2007 December; 73(23): 7589–7596. Published online 2007 October 5. doi: 10.1128/AEM.01700-07
PMCID:
PMC2168043
Abstract Full Text PDF–513K
DNA Fingerprinting of Lactic Acid Bacteria in Sauerkraut Fermentations
Vethachai Plengvidhya, Fredrick Breidt, Jr., Zhongjing Lu, Henry P. Fleming
Appl Environ Microbiol. 2007 December; 73(23): 7697–7702. Published online 2007 October 5. doi: 10.1128/AEM.01342-07
PMCID:
PMC2168044
Abstract Full Text PDF–143K Supplementary Material
Growth Characteristics of Brevibacterium, Corynebacterium, Microbacterium, and Staphylococcus spp. Isolated from Surface-Ripened Cheese
Jérôme Mounier, Mary C. Rea, Paula M. O'Connor, Gerald F. Fitzgerald, Timothy M. Cogan
Appl Environ Microbiol. 2007 December; 73(23): 7732–7739. Published online 2007 October 5. doi: 10.1128/AEM.01260-07
PMCID:
PMC2168080
Abstract Full Text PDF–314K
Plant Microbiology
Distribution and Replication of the Pathogenicity Plasmid pPATH in Diverse Populations of the Gall-Forming Bacterium Pantoea agglomerans
Dan M. Weinthal, Isaac Barash, Mary Panijel, Lea Valinsky, Victor Gaba, Shulamit Manulis-Sasson
Appl Environ Microbiol. 2007 December; 73(23): 7552–7561. Published online 2007 October 5. doi: 10.1128/AEM.01511-07
PMCID:
PMC2168073
Abstract Full Text PDF–434K Supplementary Material
Chromosomal and Symbiotic Relationships of Rhizobia Nodulating Medicago truncatula and M. laciniata
Peter van Berkum, Yazid Badri, Patrick Elia, Mohammed Elarbi Aouani, Bertrand D. Eardly
Appl Environ Microbiol. 2007 December; 73(23): 7597–7604. Published online 2007 October 5. doi: 10.1128/AEM.01046-07
PMCID:
PMC2168047
Abstract Full Text PDF–827K
Invertebrate Microbiology
Frequency of Secondary Symbiont Infection in an Invasive Psyllid Relates to Parasitism Pressure on a Geographic Scale in California
A. K. Hansen, G. Jeong, T. D. Paine, R. Stouthamer
Appl Environ Microbiol. 2007 December; 73(23): 7531–7535. Published online 2007 October 12. doi: 10.1128/AEM.01672-07
PMCID:
PMC2168064
Abstract Full Text PDF–109K
A Metalloprotease Secreted by the Insect Pathogen Photorhabdus luminescens Induces Melanization
Kiara G. Held, Christopher N. LaRock, David A. D'Argenio, Celeste A. Berg, Carleen M. Collins
Appl Environ Microbiol. 2007 December; 73(23): 7622–7628. Published online 2007 October 12. doi: 10.1128/AEM.01000-07
PMCID:
PMC2168055
Abstract Full Text PDF–231K
Spread of Infectious Chronic Bee Paralysis Virus by Honeybee (Apis mellifera L.) Feces
M. Ribière, P. Lallemand, A.-L. Iscache, F. Schurr, O. Celle, P. Blanchard, V. Olivier, J.-P. Faucon
Appl Environ Microbiol. 2007 December; 73(23): 7711–7716. Published online 2007 October 12. doi: 10.1128/AEM.01053-07
PMCID:
PMC2168079
Abstract Full Text PDF–76K
Improving the Insecticidal Activity against Resistant Culex quinquefasciatus Mosquitoes by Expression of Chitinase Gene chiAC in Bacillus sphaericus
Yajun Cai, Jianpin Yan, Xiaomin Hu, Bei Han, Zhiming Yuan
Appl Environ Microbiol. 2007 December; 73(23): 7744–7746. Published online 2007 October 12. doi: 10.1128/AEM.01510-07
PMCID:
PMC2168083
Abstract Full Text PDF–137K
Methods
Aged HCT-8 Cell Monolayers Support Cryptosporidium parvum Infection
Laura Y. Sifuentes, George D. Di Giovanni
Appl Environ Microbiol. 2007 December; 73(23): 7548–7551. Published online 2007 October 12. doi: 10.1128/AEM.01579-07
PMCID:
PMC2168060
Abstract Full Text PDF–114K
Detection of Bacteriophage-Infected Cells of Lactococcus lactis by Using Flow Cytometry
Ole Michelsen, Álvaro Cuesta-Dominguez, Bjarne Albrechtsen, Peter Ruhdal Jensen
Appl Environ Microbiol. 2007 December; 73(23): 7575–7581. Published online 2007 October 5. doi: 10.1128/AEM.01219-07
PMCID:
PMC2168076
Abstract Full Text PDF–475K
Analysis of Nitrogen-Fixing Members of the epsilon Subclass of Proteobacteria in Salt Marsh Sediments
Allana Welsh, David J. Burke, Dittmar Hahn
Appl Environ Microbiol. 2007 December; 73(23): 7747–7752. Published online 2007 October 5. doi: 10.1128/AEM.00757-07
PMCID:
PMC2168066
Abstract Full Text PDF–216K
Biodegradation
Anaerobic Metabolism of 1-Amino-2-Naphthol-Based Azo Dyes (Sudan Dyes) by Human Intestinal Microflora
Haiyan Xu, Thomas M. Heinze, Siwei Chen, Carl E. Cerniglia, Huizhong Chen
Appl Environ Microbiol. 2007 December; 73(23): 7759–7762. Published online 2007 October 12. doi: 10.1128/AEM.01410-07
PMCID:
PMC2168037
Abstract Full Text PDF–159K
Evolutionary and Genomic Microbiology
Comparative Analyses of Prophage-Like Elements Present in Two Lactococcus lactis Strains
Marco Ventura, Aldert Zomer, Carlos Canchaya, Mary O'Connell-Motherway, Oscar Kuipers, Francesca Turroni, Angela Ribbera, Elena Foroni, Girbe Buist, Udo Wegmann, Claire Shearman, Michael J. Gasson, Gerald F. Fitzgerald, Jan Kok, Douwe van Sinderen
Appl Environ Microbiol. 2007 December; 73(23): 7771–7780. Published online 2007 October 12. doi: 10.1128/AEM.01273-07
PMCID:
PMC2168057
Abstract Full Text PDF–528K
Erratum
Use of Selective Capture of Transcribed Sequences To Identify Genes Preferentially Expressed by Streptococcus suis upon Interaction with Porcine Brain Microvascular Endothelial Cells
Nahuel Fittipaldi, Marcelo Gottschalk, Ghyslaine Vanier, France Daigle, Josée Harel
Appl Environ Microbiol. 2007 December; 73(23): 7802. doi: 10.1128/AEM.02295-07
Corrects:
Appl Environ Microbiol. 2007 July; 73(13): 4359–4364.
PMCID:
PMC2168069
Correction PDF–17K Original Article
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