Appl Environ Microbiol Volume 62(10); October 1996

Volume 62(10); October 1996

Research Articles

The oligonucleotide probe database.

E W Alm, D B Oerther, N Larsen, D A Stahl, L Raskin

Appl Environ Microbiol. 1996 October; 62(10): 3557–3559.

PMCID:: PMC168159

Summary PDF–190K

5-Aminolevulinate production by Escherichia coli containing the Rhodobacter sphaeroides hemA gene.

M J van der Werf, J G Zeikus

Appl Environ Microbiol. 1996 October; 62(10): 3560–3566.

PMCID:: PMC168160

Summary PDF–333K

Identification of aflatoxin biosynthesis genes by genetic complementation in an Aspergillus flavus mutant lacking the aflatoxin gene cluster.

R Prieto, G L Yousibova, C P Woloshuk

Appl Environ Microbiol. 1996 October; 62(10): 3567–3571.

PMCID:: PMC168161

Summary PDF–341K

Pulsed-field gel electrophoresis and ribotype profiles of clinical and environmental Vibrio vulnificus isolates.

M L Tamplin, J K Jackson, C Buchrieser, R L Murphree, K M Portier, V Gangar, L G Miller, C W Kaspar

Appl Environ Microbiol. 1996 October; 62(10): 3572–3580.

PMCID:: PMC168162

Summary PDF–560K

Synergistic activity of a Bacillus thuringiensis delta-endotoxin and a bacterial endochitinase against Spodoptera littoralis larvae.

A Regev, M Keller, N Strizhov, B Sneh, E Prudovsky, I Chet, I Ginzberg, Z Koncz-Kalman, C Koncz, J Schell, A Zilberstein

Appl Environ Microbiol. 1996 October; 62(10): 3581–3586.

PMCID:: PMC168163

Summary PDF–2.0M

Manganese-enhanced biotransformation of atrazine by the white rot fungus Pleurotus pulmonarius and its correlation with oxidation activity.

S Masaphy, Y Henis, D Levanon

Appl Environ Microbiol. 1996 October; 62(10): 3587–3593.

PMCID:: PMC168164

Summary PDF–319K

The effect of nutrient limitation on styrene metabolism in Pseudomonas putida CA-3.

K O'Connor, W Duetz, B Wind, A D Dobson

Appl Environ Microbiol. 1996 October; 62(10): 3594–3599.

PMCID:: PMC168165

Summary PDF–268K

Biological degradation of tannins in sericea lespedeza (Lespedeza cuneata) by the white rot fungi Ceriporiopsis subvermispora and Cyathus stercoreus analyzed by solid-state 13C nuclear magnetic resonance spectroscopy.

G R Gamble, D E Akin, H P Makkar, K Becker

Appl Environ Microbiol. 1996 October; 62(10): 3600–3604.

PMCID:: PMC168166

Summary PDF–284K

Degradative capacities and 16S rRNA-targeted whole-cell hybridization of sulfate-reducing bacteria in an anaerobic enrichment culture utilizing alkylbenzenes from crude oil.

R Rabus, M Fukui, H Wilkes, F Widdle

Appl Environ Microbiol. 1996 October; 62(10): 3605–3613.

PMCID:: PMC168167

Summary PDF–714K

Malt-yeast extract-sucrose agar, a suitable medium for enumeration and isolation of fungi from silage.

I Skaar, H Stenwig

Appl Environ Microbiol. 1996 October; 62(10): 3614–3619.

PMCID:: PMC168168

Summary PDF–12M

Physiological ecology of Methanobrevibacter cuticularis sp. nov. and Methanobrevibacter curvatus sp. nov., isolated from the hindgut of the termite Reticulitermes flavipes.

J R Leadbetter, J A Breznak

Appl Environ Microbiol. 1996 October; 62(10): 3620–3631.

PMCID:: PMC168169

Summary PDF–1.8M

A simulation of microbial competition in the human colonic ecosystem.

M E Coleman, D W Dreesen, R G Wiegert

Appl Environ Microbiol. 1996 October; 62(10): 3632–3639.

PMCID:: PMC168170

Summary PDF–325K

Description of a Redox-Controlled Sulfidostat for the Growth of Sulfide-Oxidizing Phototrophs

O. Sanchez, H. van Gemerden, J. Mas

Appl Environ Microbiol. 1996 October; 62(10): 3640–3645.

PMCID:: PMC1388955

Summary PDF–305K

Kinetics of mRNA and protein synthesis of genes controlled by the 1,4-beta-endoxylanase A promoter in controlled fermentations of Aspergillus awamori.

R J Gouka, H Stam, A J Fellinger, R J Muijsenberg, A van de Wijngaard, P J Punt, W Musters, C A van den Hondel

Appl Environ Microbiol. 1996 October; 62(10): 3646–3649.

PMCID:: PMC168171

Summary PDF–928K

Kinetics of adhesion of selected fish-pathogenic Vibrio strains of skin mucus of gilt-head sea bream (Sparus aurata L.).

M A Bordas, M C Balebona, I Zorrilla, J J Borrego, M A Moriñigo

Appl Environ Microbiol. 1996 October; 62(10): 3650–3654.

PMCID:: PMC168172

Summary PDF–264K

Measurement of minimum substrate concentration (Smin) in a recycling fermentor and its prediction from the kinetic parameters of Pseudomonas strain B13 from batch and chemostat cultures.

M E Tros, T N Bosma, G Schraa, A J Zehnder

Appl Environ Microbiol. 1996 October; 62(10): 3655–3661.

PMCID:: PMC168173

Summary PDF–390K

Controlled gene expression systems for Lactococcus lactis with the food-grade inducer nisin.

P G de Ruyter, O P Kuipers, W M de Vos

Appl Environ Microbiol. 1996 October; 62(10): 3662–3667.

PMCID:: PMC168174

Summary PDF–1.7M

Specific detection and analysis of a probiotic Bifidobacterium strain in infant feces.

R G Kok, A de Waal, F Schut, G W Welling, G Weenk, K J Hellingwerf

Appl Environ Microbiol. 1996 October; 62(10): 3668–3672.

PMCID:: PMC168175

Summary PDF–252K

Genetic transformation in freshwater: Escherichia coli is able to develop natural competence.

B Baur, K Hanselmann, W Schlimme, B Jenni

Appl Environ Microbiol. 1996 October; 62(10): 3673–3678.

PMCID:: PMC168176

Summary PDF–351K

Manganese-Dependent Cleavage of Nonphenolic Lignin Structures by Ceriporiopsis subvermispora in the Absence of Lignin Peroxidase

K. A. Jensen, W. Bao, S. Kawai, E. Srebotnik, K. E. Hammel

Appl Environ Microbiol. 1996 October; 62(10): 3679–3686.

Correction in:: Appl Environ Microbiol. 1997 February; 63(2): 815.

PMCID:: PMC1388956

Summary PDF–389K Correction

Physiology and metabolic fluxes of wild-type and riboflavin-producing Bacillus subtilis.

U Sauer, V Hatzimanikatis, H P Hohmann, M Manneberg, A P van Loon, J E Bailey

Appl Environ Microbiol. 1996 October; 62(10): 3687–3696.

PMCID:: PMC168177

Summary PDF–442K

Expression of lip genes during growth in soil and oxidation of anthracene by Phanerochaete chrysosporium.

B W Bogan, B Schoenike, R T Lamar, D Cullen

Appl Environ Microbiol. 1996 October; 62(10): 3697–3703.

PMCID:: PMC168178

Summary PDF–654K

Cloning of the genes for and characterization of the early stages of toluene and o-xylene catabolism in Pseudomonas stutzeri OX1.

G Bertoni, F Bolognese, E Galli, P Barbieri

Appl Environ Microbiol. 1996 October; 62(10): 3704–3711.

PMCID:: PMC168179

Summary PDF–287K

Combined Expression of Aspergillus nidulans Endoxylanase X24 and Aspergillus oryzae (alpha)-Amylase in Industrial Baker's Yeasts and Their Use in Bread Making

A. Monfort, A. Blasco, J. A. Prieto, P. Sanz

Appl Environ Microbiol. 1996 October; 62(10): 3712–3715.

PMCID:: PMC1388957

Summary PDF–998K

Clustering of Marine Bacteria in Seawater Enrichments

J. G. Mitchell, L. Pearson, S. Dillon

Appl Environ Microbiol. 1996 October; 62(10): 3716–3721.

PMCID:: PMC1388958

Summary PDF–329K

Bacillus thuringiensis HD-73 Spores Have Surface-Localized Cry1Ac Toxin: Physiological and Pathogenic Consequences

C. Du, K. W. Nickerson

Appl Environ Microbiol. 1996 October; 62(10): 3722–3726.

PMCID:: PMC1388959

Summary PDF–469K

Overcoming a defect in generalized recombination in the marine fish pathogen Vibrio anguillarum 775: construction of a recA mutant by marker exchange.

J T Singer, C Ma, K J Boettcher

Appl Environ Microbiol. 1996 October; 62(10): 3727–3731.

PMCID:: PMC168180

Summary PDF–250K

Production of Two Extracellular Alkaline Phosphatases by a Psychrophilic Arthrobacter Strain

P. de Prada, J. Loveland-Curtze, J. E. Brenchley

Appl Environ Microbiol. 1996 October; 62(10): 3732–3738.

PMCID:: PMC1388960

Summary PDF–540K

Isolation of laccase gene-specific sequences from white rot and brown rot fungi by PCR.

T M D'Souza, K Boominathan, C A Reddy

Appl Environ Microbiol. 1996 October; 62(10): 3739–3744.

PMCID:: PMC168181

Summary PDF–719K

Tailing of thermal inactivation curve of Aspergillus niger spores.

H Fujikawa, T Itoh

Appl Environ Microbiol. 1996 October; 62(10): 3745–3749.

PMCID:: PMC168182

Summary PDF–299K

Isozyme Variation among Biological Species in the Gibberella fujikuroi Species Complex (Fusarium Section Liseola)

M. J. Huss, C. L. Campbell, D. B. Jennings, J. F. Leslie

Appl Environ Microbiol. 1996 October; 62(10): 3750–3756.

PMCID:: PMC1388961

Summary PDF–326K

Protein Synthesis by Bradyrhizobium japonicum Bacteroids Declines as a Function of Nodule Age

D. B. Karr, D. W. Emerich

Appl Environ Microbiol. 1996 October; 62(10): 3757–3761.

PMCID:: PMC1388962

Summary PDF–410K

Transposon mutagenesis in Desulfovibrio desulfuricans: development of a random mutagenesis tool from Tn7.

J D Wall, T Murnan, J Argyle, R S English, B J Rapp-Giles

Appl Environ Microbiol. 1996 October; 62(10): 3762–3767.

PMCID:: PMC168183

Summary PDF–408K

Virulence determinants invA and spvC in salmonellae isolated from poultry products, wastewater, and human sources.

S C Swamy, H M Barnhart, M D Lee, D W Dreesen

Appl Environ Microbiol. 1996 October; 62(10): 3768–3771.

PMCID:: PMC168184

Summary PDF–321K

Detection of human enteric viruses in oysters by in vivo and in vitro amplification of nucleic acids.

H Chung, L A Jaykus, M D Sobsey

Appl Environ Microbiol. 1996 October; 62(10): 3772–3778.

PMCID:: PMC168185

Summary PDF–2.7M

Phylogenetic analyses of some extremely halophilic archaea isolated from Dead Sea water, determined on the basis of their 16S rRNA sequences.

D R Arahal, F E Dewhirst, B J Paster, B E Volcani, A Ventosa

Appl Environ Microbiol. 1996 October; 62(10): 3779–3786.

PMCID:: PMC168186

Summary PDF–263K

Estimation of the abundance of an uncultured soil bacterial strain by a competitive quantitative PCR method.

S Y Lee, J Bollinger, D Bezdicek, A Ogram

Appl Environ Microbiol. 1996 October; 62(10): 3787–3793.

PMCID:: PMC168187

Summary PDF–1.0M

Stereospecific production of the herbicide phosphinothricin (glufosinate): purification of aspartate transaminase from Bacillus stearothermophilus, cloning of the corresponding gene, aspC, and application in a coupled transaminase process.

K Bartsch, R Schneider, A Schulz

Appl Environ Microbiol. 1996 October; 62(10): 3794–3799.

PMCID:: PMC168188

Summary PDF–322K

Characterization of Desulfitobacterium chlororespirans sp. nov., which grows by coupling the oxidation of lactate to the reductive dechlorination of 3-chloro-4-hydroxybenzoate.

R A Sanford, J R Cole, F E Löffler, J M Tiedje

Appl Environ Microbiol. 1996 October; 62(10): 3800–3808.

PMCID:: PMC168189

Summary PDF–974K

Initial Characterization of a Reductive Dehalogenase from Desulfitobacterium chlororespirans Co23

F. E. Loffler, R. A. Sanford, J. M. Tiedje

Appl Environ Microbiol. 1996 October; 62(10): 3809–3813.

PMCID:: PMC1388963

Summary PDF–266K

Novel Metabolic Transformation Pathway for Cyclic Imides in Blastobacter sp. Strain A17p-4

J. Ogawa, C. L. Soong, M. Honda, S. Shimizu

Appl Environ Microbiol. 1996 October; 62(10): 3814–3817.

PMCID:: PMC1388964

Summary PDF–240K

Phenotypic and genotypic characterization of phenanthrene-degrading fluorescent Pseudomonas biovars.

K Johnsen, S Andersen, C S Jacobsen

Appl Environ Microbiol. 1996 October; 62(10): 3818–3825.

PMCID:: PMC168190

Summary PDF–301K

The NAD(P)H-dependent glutamate dehydrogenase activities of Prevotella ruminicola B(1)4 can be attributed to one enzyme (GdhA), and gdhA expression is regulated in response to the nitrogen source available for growth.

Z Wen, M Morrison

Appl Environ Microbiol. 1996 October; 62(10): 3826–3833.

PMCID:: PMC168191

Summary PDF–622K

Resistance to Phosphinothricin (Glufosinate) and Its Utilization as a Nitrogen Source by Chlamydomonas reinhardtii

A. R. Franco, F. J. Lopez-Siles, J. Cardenas

Appl Environ Microbiol. 1996 October; 62(10): 3834–3839.

PMCID:: PMC1388965

Summary PDF–987K

Cloning of genes encoding alpha-L-arabinofuranosidase and beta-xylosidase from Trichoderma reesei by expression in Saccharomyces cerevisiae.

E Margolles-Clark, M Tenkanen, T Nakari-Setälä, M Penttilä

Appl Environ Microbiol. 1996 October; 62(10): 3840–3846.

PMCID:: PMC168192

Summary PDF–454K

Competition and Coexistence of Sulfate-Reducing and Methanogenic Populations in Anaerobic Biofilms

L. Raskin, B. E. Rittmann, D. A. Stahl

Appl Environ Microbiol. 1996 October; 62(10): 3847–3857.

PMCID:: PMC1388966

Summary PDF–370K

Natural contamination of Manitoba barley by 3,15-diacetyldeoxynivalenol and its detection by immunochromatography.

E Usleber, D Abramson, R Gessler, D M Smith, R M Clear, E Märtlbauer

Appl Environ Microbiol. 1996 October; 62(10): 3858–3860.

PMCID:: PMC168193

Summary PDF–228K

Improved method for the preparative synthesis of labeled trehalose of high specific activity by Escherichia coli.

R Horlacher, R Peist, W Boos

Appl Environ Microbiol. 1996 October; 62(10): 3861–3863.

PMCID:: PMC168194

Summary PDF–386K

Involvement of carnitine acyltransferases in peroxisomal fatty acid metabolism by the yeast Pichia guilliermondii.

Y Pagot, J M Belin

Appl Environ Microbiol. 1996 October; 62(10): 3864–3867.

PMCID:: PMC168195

Summary PDF–275K

Evaluation of cyclohexenoesculetin-beta-D-galactoside and 8-hydroxyquinoline-beta-D-galactoside as substrates for the detection of beta-galactosidase.

A L James, J D Perry, M Ford, L Armstrong, F K Gould

Appl Environ Microbiol. 1996 October; 62(10): 3868–3870.

PMCID:: PMC168196

Summary PDF–514K

Expression of virulence-related properties by, and intestinal adhesiveness of, Vibrio mimicus strains isolated from aquatic environments.

M Alam, S Miyoshi, S Yamamoto, K Tomochika, S Shinoda

Appl Environ Microbiol. 1996 October; 62(10): 3871–3874.

PMCID:: PMC168197

Summary PDF–274K

Offshore suspension relaying to reduce levels of Vibrio vulnificus in oysters (Crassostrea virginica).

M L Motes, A DePaola

Appl Environ Microbiol. 1996 October; 62(10): 3875–3877.

PMCID:: PMC168198

Summary PDF–210K

Evaluation of Enterolert for enumeration of enterococci in recreational waters.

G E Budnick, R T Howard, D R Mayo

Appl Environ Microbiol. 1996 October; 62(10): 3881–3884.

PMCID:: PMC168199

Summary PDF–238K

Enrichment and isolation of a nitropropanol-metabolizing bacterium from the rumen.

R C Anderson, M A Rasmussen, M J Allison

Appl Environ Microbiol. 1996 October; 62(10): 3885–3886.

PMCID:: PMC168200

Summary PDF–167K

Prevalence of Lyme disease spirochetes in Ixodes persulcatus and wild rodents in far eastern Russia.

Y Sato, K Miyamoto, A Iwaki, T Masuzawa, Y Yanagihara, E I Korenberg, N B Gorelova, V I Volkov, L I Ivanov, R N Liberova

Appl Environ Microbiol. 1996 October; 62(10): 3887–3889.

PMCID:: PMC168201

Summary PDF–205K

Polymerization of pentachlorophenol and ferulic acid by fungal extracellular lignin-degrading enzymes.

C Rüttimann-Johnson, R T Lamar

Appl Environ Microbiol. 1996 October; 62(10): 3890–3893.

PMCID:: PMC168202

Summary PDF–283K

A glycerol-3-phosphate dehydrogenase-deficient mutant of Saccharomyces cerevisiae expressing the heterologous XYL1 gene.

G Lidén, M Walfridsson, R Ansell, M Anderlund, L Adler, B Hahn-Hägerdal

Appl Environ Microbiol. 1996 October; 62(10): 3894–3896.

PMCID:: PMC168203

Summary PDF–295K

Identification of a functionally important population in phenol-digesting activated sludge with antisera raised against isolated bacterial strains.

K Watanabe, S Hino

Appl Environ Microbiol. 1996 October; 62(10): 3901–3904.

PMCID:: PMC168204

Summary PDF–283K

Gaseous disinfection of Cryptosporidium parvum oocysts.

R Fayer, T K Graczyk, M R Cranfield, J M Trout

Appl Environ Microbiol. 1996 October; 62(10): 3908–3909.

PMCID:: PMC168205

Summary PDF–243K

Genetic exchange in soil between introduced chlorobenzoate degraders and indigenous biphenyl degraders.

D D Focht, D B Searles, S C Koh

Appl Environ Microbiol. 1996 October; 62(10): 3910–3913.

PMCID:: PMC168206

Summary PDF–559K

Notes

Complete Sucrose Metabolism Requires Fructose Phosphotransferase Activity in Corynebacterium glutamicum To Ensure Phosphorylation of Liberated Fructose

H. Dominguez, N. D. Lindley

Appl Environ Microbiol. 1996 October; 62(10): 3878–3880.

PMCID:: PMC1388967

Summary PDF–261K

Comparison of Pressure Resistances of Spores of Six Bacillus Strains with Their Heat Resistances

A. Nakayama, Y. Yano, S. Kobayashi, M. Ishikawa, K. Sakai

Appl Environ Microbiol. 1996 October; 62(10): 3897–3900.

PMCID:: PMC1388968

Summary PDF–275K

Rapid Extraction of DNA and rRNA from Sediments by a Novel Hydroxyapatite Spin-Column Method

K. J. Purdy, T. M. Embley, S. Takii, D. B. Nedwell

Appl Environ Microbiol. 1996 October; 62(10): 3905–3907.

PMCID:: PMC1388969

Summary PDF–217K

Errata

Genotype Characterization of the Bacterium Expressing the Male-Killing Trait in the Ladybird Beetle Adalia bipunctata with Specific Rickettsial Molecular Tools

N. M. Balayeva, M. E. Eremeeva, H. Tissot-Dupont, I. A. Zakharov, D. Raoult

Appl Environ Microbiol. 1996 October; 62(10): 3914.

Corrects:: Appl Environ Microbiol. 1995 April; 61(4): 1431–1437.

PMCID:: PMC1388970

Correction Original Article

Distribution of Bacterial Populations in a Stratified Fjord (Mariager Fjord, Denmark) Quantified by In Situ Hybridization and Related to Chemical Gradients in the Water Column

N. B. Ramsing, H. Fossing, T. G. Ferdelman, F. Andersen, B. Thamdrup

Appl Environ Microbiol. 1996 October; 62(10): 3914.

Corrects:: Appl Environ Microbiol. 1996 April; 62(4): 1391–1404.

PMCID:: PMC1388971

Correction Original Article

Differential Susceptibility of Aeromonads and Coliforms to Cefsulodin

J. L. Alonso, I. Amoros, M. A. Alonso

Appl Environ Microbiol. 1996 October; 62(10): 3914.

Corrects:: Appl Environ Microbiol. 1996 June; 62(6): 1885–1888.

PMCID:: PMC1388972

Correction Original Article

Author’s Corrections

Distribution of Bacterial Populations in a Stratified Fjord (Mariager Fjord, Denmark) Quantified by In Situ Hybridization and Related to Chemical Gradients in the Water Column

N. B. Ramsing, H. Fossing, T. G. Ferdelman, F. Andersen, B. Thamdrup

Appl Environ Microbiol. 1996 October; 62(10): 3915.

Corrects:: Appl Environ Microbiol. 1996 April; 62(4): 1391–1404.

PMCID:: PMC1388973

Correction Original Article

Purification and Some Properties of a Xylanase from Aspergillus sydowii MG49

M. Ghosh, G. Nanda

Appl Environ Microbiol. 1996 October; 62(10): 3915.

Corrects:: Appl Environ Microbiol. 1994 December; 60(12): 4620–4623.

Correction in:: Appl Environ Microbiol. 1997 February; 63(2): 817.

PMCID:: PMC1388974

Correction Original Article Correction

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