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Gene expression in the developing mouse retina by EST sequencing and microarray analysis
Xiuqian Mu, Sheng Zhao, Rashmi Pershad, Tzung-Fu Hsieh, Ann Scarpa, Steven W. Wang, R. Allen White, Phillip D. Beremand, Terry L. Thomas, Lin Gan, William H. Klein
Nucleic Acids Res. 2001 December 15; 29(24): 4983–4993.
PMCID:
PMC97568
Abstract Full Text PDF–412K Supplementary Material
 Is Cited by the Following 14 Articles in this Archive:
Have microarrays failed to deliver for developmental biology?
Rick Livesey
Genome Biol. 2002; 3(9): comment2009.1–comment2009.5. Published online 2002 August 27.
PMCID:
PMC139405
Abstract Full Text PDF–333K
Transcriptome analysis of the retina
Anand Swaroop, Donald J Zack
Genome Biol. 2002; 3(8): reviews1022.1–reviews1022.4. Published online 2002 July 30.
PMCID:
PMC139398
Abstract Full Text PDF–294K
Microarray and EST database estimates of mRNA expression levels differ: The protein length versus expression curve for C. elegans
Enrique T Munoz, Leonard D Bogarad, Michael W Deem
BMC Genomics. 2004; 5: 30. Published online 2004 May 10. doi: 10.1186/1471-2164-5-30
PMCID:
PMC434498
Abstract Full Text PDF–273K
A biphasic pattern of gene expression during mouse retina development
Samuel Shao-Min Zhang, Xuming Xu, Mu-Gen Liu, Hongyu Zhao, Marcelo Bento Soares, Colin J Barnstable, Xin-Yuan Fu
BMC Dev Biol. 2006; 6: 48. Published online 2006 October 17. doi: 10.1186/1471-213X-6-48
PMCID:
PMC1633734
Abstract Full Text PDF–3.7M Supplementary Material
A pig multi-tissue normalised cDNA library: large-scale sequencing, cluster analysis and 9K micro-array resource generation
Agnès Bonnet, Eddie Iannuccelli, Karine Hugot, Francis Benne, Maria F Bonaldo, Marcelo B Soares, François Hatey, Gwenola Tosser-Klopp
BMC Genomics. 2008; 9: 17. Published online 2008 January 14. doi: 10.1186/1471-2164-9-17
PMCID:
PMC2257943
Abstract Full Text PDF–852K Supplementary Material
Current Awareness on Comparative and Functional Genomics
Comp Funct Genomics. 2002 June; 3(3): 293–304. doi: 10.1002/cfg.118
PMCID:
PMC2447281
Summary PDF–161K
Genomic Analysis of Mouse Retinal Development
Seth Blackshaw, Sanjiv Harpavat, Jeff Trimarchi, Li Cai, Haiyan Huang, Winston P Kuo, Griffin Weber, Kyungjoon Lee, Rebecca E Fraioli, Seo-Hee Cho, Rachel Yung, Elizabeth Asch, Lucila Ohno-Machado, Wing H Wong, Constance L Cepko
PLoS Biol. 2004 September; 2(9): e247. Published online 2004 June 29. doi: 10.1371/journal.pbio.0020247
PMCID:
PMC439783
Abstract Full Text PDF–975K Supplementary Material
Annotation and analysis of 10,000 expressed sequence tags from developing mouse eye and adult retina
Jindan Yu, Rafal Farjo, Sean P MacNee, Wolfgang Baehr, Dwight E Stambolian, Anand Swaroop
Genome Biol. 2003; 4(10): R65. Published online 2003 September 22.
PMCID:
PMC328454
Abstract Full Text PDF–538K Supplementary Material
Identification of regulatory targets of tissue-specific transcription factors: application to retina-specific gene regulation
Jiang Qian, Noriko Esumi, Yangjian Chen, Qingliang Wang, Itay Chowers, Donald J. Zack
Nucleic Acids Res. 2005; 33(11): 3479–3491. Published online 2005 June 20. doi: 10.1093/nar/gki658
Correction in:
Nucleic Acids Res. 2005; 33(12): 3953.
PMCID:
PMC1153713
Abstract Full Text PDF–1.3M Supplementary Material Correction
Gene expression patterns in hypoxic and post-hypoxic adult rat retina with special reference to the NMDA receptor and its interactome
Lori Ann Crosson, Roger A. Kroes, Joseph R. Moskal, Robert A. Linsenmeier
Mol Vis. 2009; 15: 296–311. Published online 2009 February 9.
PMCID:
PMC2635851
Abstract Full Text PDF–3.4M
Using a Seed-Network to Query Multiple Large-Scale Gene Expression Datasets from the Developing Retina in Order to Identify and Prioritize Experimental Targets
Laura A. Hecker, Timothy C. Alcon, Vasant G. Honavar, M. Heather West Greenlee
Bioinform Biol Insights. 2008; 2: 401–412. Published online 2008 February 1.
PMCID:
PMC2735966
Abstract Full Text PDF–636K Supplementary Material
Transcriptome analysis using next generation sequencing reveals molecular signatures of diabetic retinopathy and efficacy of candidate drugs
Raj P. Kandpal, Harsha K. Rajasimha, Matthew J. Brooks, Jacob Nellissery, Jun Wan, Jiang Qian, Timothy S. Kern, Anand Swaroop
Mol Vis. 2012; 18: 1123–1146. Published online 2012 May 2.
PMCID:
PMC3351417
Abstract Full Text PDF–853K
β-catenin is essential for lamination but not neurogenesis in mouse retinal development
Xueyao Fu, Hongxia Sun, William H. Klein, Xiuqian Mu
Dev Biol. Author manuscript; available in PMC 2012 June 28.
Published in final edited form as: Dev Biol. 2006 November 15; 299(2): 424–437. Published online 2006 August 10. doi: 10.1016/j.ydbio.2006.08.015
PMCID:
PMC3385515
Abstract Full Text PDF–4.8M
Stage and Gene Specific Signatures Defined by Histones H3K4me2 and H3K27me3 Accompany Mammalian Retina Maturation In Vivo
Evgenya Y. Popova, Xuming Xu, Andrew T. DeWan, Anna C. Salzberg, Arthur Berg, Josephine Hoh, Samuel S. Zhang, Colin J. Barnstable
PLoS One. 2012; 7(10): e46867. Published online 2012 October 9. doi: 10.1371/journal.pone.0046867
PMCID:
PMC3467275
Abstract Full Text PDF–1.3M Supplementary Material