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Logo of lwwopenLippincott Williams & WilkinsThis article
Medical Care
 
Med Care. 2017 August; 55(8): 781.
Published online 2017 July 13. doi:  10.1097/MLR.0000000000000750
PMCID: PMC5510702

Contribution of Natural Language Processing in Predicting Rehospitalization Risk

Christopher Norman, MSc,* Thu Van Nguyen, PharmD, MPH,§ and Aurélie Névéol, PhD*

To the Editor:

Greenwald et al1 propose using free text in patient records to estimate hospital readmission risk. They use expert knowledge to identify 35 groups of phrases indicative of 30-day rehospitalization, and use 16 of these in logistic regression. We believe the use of natural language processing (NLP) for predicting rehospitalization is an interesting approach, and provide suggestions to improve the model.

NLP METHODS

The proposed terms are all n-grams (n≤4) and therefore a subset of simpler bag-of-words,2 which can be extracted with lighter expert workload. Grouping terms to create variables can be done automatically using topic modeling.3 Taking context into account and normalizing abbreviations and word variants, as discussed by the authors, can be done using common-off-the-shelf software such as cTAKES.4 Graph modeling is another document representation for classification that has been shown to have good interpretability by experts.5

COLLINEARITY

The distortion of the coefficients in table 3 and the modest improvements over the baseline suggest that the variables may share the same information. The Pearson correlation coefficients of all variables would help determine whether this is the case.

MODEL EVALUATION

Another concern is that the proposed method is only compared with a baseline of prior hospitalizations. To evaluate the added value of the proposed variables, a stronger baseline could use all available structured data in the patient records that have been shown to have predictive value, that is, age, sex, comorbidity index.6 This also contributes to measuring the true effect of the proposed variables when adjusting for potential confounders.

CONCLUSIONS

The study of rehospitalization risks presents an excellent opportunity to assess the contribution of NLP to predicting important clinical outcomes. With this letter we want to encourage a more thorough evaluation of NLP methods toward this goal.

Christopher Norman, MSc*†
Thu Van Nguyen, PharmD, MPH‡§
Aurélie Névéol, PhD*
*LIMSI, CNRS, Université Paris Saclay, Orsay, France
†Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands
‡Equipe METHODS, Sorbonne Paris Cité Epidemiology and Statistics Research Center, University Paris Descartes, Paris, France
§University of Liverpool, Liverpool, UK

Footnotes

On behalf of the Methods in Research on Research (MiRoR) project.

Supported by the European Union’s Horizon 2020 research and innovation programme under the Marie Sklodowska-Curie grant agreement no. 676207.

The authors declare no conflict of interest.

REFERENCES

1. Greenwald JL, Cronin PR, Carballo V, et al. A novel model for predicting rehospitalization risk incorporating physical function, cognitive status, and psychosocial support using natural language processing. Med Care. 2017;55:261–266. [PubMed]
2. Jurafsky D, Martin JH. Speech and Language Processing, 2nd ed Upper Saddle River, NJ: Prentice-Hall Inc.; 2009.
3. Rumshisky A, Ghassemi M, Naumann T, et al. Predicting early psychiatric readmission with natural language processing of narrative discharge summaries. Transl Psychiatry. 2016;6:e921. [PMC free article] [PubMed]
4. Savova GK, Masanz JJ, Ogren PV, et al. Mayo clinical Text Analysis and Knowledge Extraction System (cTAKES): architecture, component evaluation and applications. J Am Med Inform Assoc. 2010;17:507–513. [PMC free article] [PubMed]
5. Luo Y, Xin Y, Hochberg E, et al. Subgraph augmented non-negative tensor factorization (SANTF) for modeling clinical narrative text. J Am Med Inform Assoc. 2015;22:1009–1019. [PMC free article] [PubMed]
6. Kansagara D, Englander H, Salanitro A, et al. Risk prediction models for hospital readmission: a systematic review. JAMA. 2011;306:1688–1698. [PMC free article] [PubMed]

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