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J Neurosci. 2013 July 10; 33(28): 11440–11450.
PMCID: PMC3724332

Rapid Suppression of Inhibitory Synaptic Transmission by Retinoic Acid


In brain, properly balanced synaptic excitation and inhibition is critically important for network stability and efficient information processing. Here, we show that retinoic acid (RA), a synaptic signaling molecule whose synthesis is activated by reduced neural activity, induces rapid internalization of synaptic GABAA receptors in mouse hippocampal neurons, leading to significant reduction of inhibitory synaptic transmission. Similar to its action at excitatory synapses, action of RA at inhibitory synapses requires protein translation and is mediated by a nontranscriptional function of the RA-receptor RARα. Different from RA action at excitatory synapses, however, RA at inhibitory synapses causes a loss instead of the gain of a synaptic protein (i.e., GABAARs). Moreover, the removal of GABAARs from the synapses and the reduction of synaptic inhibition do not require the execution of RA's action at excitatory synapses (i.e., downscaling of synaptic inhibition is intact when upscaling of synaptic excitation is blocked). Thus, the action of RA at inhibitory and excitatory synapses diverges significantly after the step of RARα-mediated protein synthesis, and the regulations of GABAAR and AMPAR trafficking are independent processes. When both excitatory and inhibitory synapses are examined together in the same neuron, the synaptic excitation/inhibition ratio is significantly enhanced by RA. Importantly, RA-mediated downscaling of synaptic inhibition is completely absent in Fmr1 knock-out neurons. Thus, RA acts as a central organizer for coordinated homeostatic plasticity in both excitatory and inhibitory synapses, and impairment of this overall process alters the excitatory/inhibitory balance of a circuit and likely represents a major feature of fragile X-syndrome.


Optimal information processing requires that changes in the inputs of a neural network efficiently and faithfully translate into changes in their outputs, an ability that demands both network stability and appropriately balanced synaptic connectivity. In this regard, much attention has focused on excitatory synaptic transmission, as it is the direct driving force for generating postsynaptic action potentials and for propagation of information. However, inhibitory synaptic transmission is critically involved in gating, sculpting, and tuning the output generated by excitatory inputs and, in some cases, even in instructing excitatory synaptic plasticity (Fagiolini et al., 2004; Haider et al., 2006; Sibilla and Ballerini, 2009; Levy and Reyes, 2011). It is therefore likely that synaptic inhibition also undergoes plastic changes in response to altered inputs (i.e., reduced or blocked synaptic excitation), thus shifting the excitation/inhibition ratio and achieving balanced synaptic excitation and inhibition.

The efficient modulation of excitation and inhibition underlies the homeostatic adaptations observed in different systems, such as the developing visual cortex (Komatsu, 1994; Hensch et al., 1998; Morales et al., 2002; Maffei et al., 2004; Hensch and Fagiolini, 2005), the auditory cortex (Kotak et al., 2005; Sun et al., 2010; Yang et al., 2011), and the barrel cortex (Higley and Contreras, 2006; House et al., 2011). In addition, numerous pathological conditions, such as autism, schizophrenia, epilepsy, and intellectual disability, may arise from the inability of neural networks to homeostatically adjust to external inputs (Ramocki and Zoghbi, 2008). In particular, in fmr1 KO mice, a mouse model of Fragile-X syndrome, absence of homeostatic adjustment of synaptic excitation (Soden and Chen, 2010), and evidence for an altered excitation/inhibition balance (Gibson et al., 2008) have both been demonstrated, emphasizing the primary role of the dynamic regulation of the excitation/inhibition balance in neural networks and normal brain function.

Several molecular pathways are known to participate in the homeostatic upregulation of excitatory synaptic strength after prolonged reduction of excitatory synaptic transmission (Yu and Goda, 2009; Turrigiano, 2012; Chen et al., 2013). Recent findings show that long-lasting changes in activity also modulate inhibitory transmission in the same cells or systems that express homeostatic changes at excitatory synapses (Kilman et al., 2002; Saliba et al., 2009). This modulation is mediated by changes in the number of postsynaptic GABAA-receptors (GABAARs) in a reciprocal manner to the changes in excitatory receptors (Saliba et al., 2007). However, little is known about the mechanisms of homeostatic changes in synaptic inhibition.

Here, we show that synaptic retinoic acid (RA) signaling plays an essential role in regulating inhibitory synaptic transmission in response to reduced synaptic excitation and that this action of RA involves its function in regulating protein synthesis but not its role as a transcriptional regulator. Thus, RA acts as a central organizer to alter synaptic excitation/inhibition (E/I) balance through its ability to directly modulate both excitatory and inhibitory synaptic strength. We further show that, in the absence of FMRP, RA fails to regulate inhibitory synaptic strength, and suggest that the resulting impact on the synaptic E/I ratio may contribute to Fragile-X syndrome pathogenesis.

Materials and Methods

Mouse husbandry.

The RARα floxed mouse (C57BL/6 background) is a gift from Drs. Pierre Chambon and Norbert Ghyselinck (IGBMC, Strasbourg, France) (Chapellier et al., 2002) and has been previously described (Sarti et al., 2012). Wild-type and fmr1−/y mice in the FVB background were obtained from The Jackson Laboratory. Mice of either sex were used for the study.

Drugs and chemicals.

The following drugs and chemicals were purchased from Sigma-Aldrich: all-trans RA, actinomycin D, cycloheximide, picrotoxin, and 4-(diethylamino)-benzaldehyde (DEAB). TTX was purchased from Tocris Biosciences, and d-APV from Fisher.

Primary neuronal culture electrophysiology.

Rat primary hippocampal neuronal cultures were prepared as previously described (Aoto et al., 2008). Manipulations used to induce scaling of inhibitory transmission included the following: TTX + APV (1 μm TTX + 100 μm APV, 24 h); RA (1 μm, 30 min followed by 1 h of washout); TTX + CNQX (1 μ m TTX + 10 μm CNQX, 24 h); and TTX + APV + DEAB (1 μm TTX + 100 μm APV + DEAB 10 μm, 24 h). Other drug treatment included the following: preincubation of neurons in anisomycin (40 μm), cycloheximide (100 μm), or actinomycin D (50 μm) for 30 min before incubation with RA. Dissociated cultures used for dynamin-1 K44E overexpression (gift from Dr. Mark Von Zastrow) and GluR1-C terminal overexpression were transfected using lipofectamine 200 (Invitrogen) at 10–11 DIV with a protocol previously described. Whole-cell patch-clamp recordings were made at room temperature from 14–16 DIV cultured neurons, with 4–6 MΩ borosilicate patch pipettes filled with an internal solution containing (in mm) the following: 120 CsCl, 2 MgCl2, 5 EGTA, 10 HEPES, 0.3 Na3-GTP, 4 Na2-ATP, pH 7.35. Cultures were continuously superfused with external solution (in mm) as follows: 100 NaCl, 26 NaHCO3, 2.5 KCl, 11 glucose, 2.5 CaCl2, 1.3 MgSO4 1.0 NaH2PO4). For miniature IPSC (mIPSC) recording, TTX (1 μm), CNQX (10 μm), and APV (50 μm) were included in the perfusion bath. For mEPSC recordings, bath solution contained TTX (1 μm) and picrotoxin (100 μm). Cells were held at −60 mV.

Organotypic slices electrophysiology.

Hippocampal slice cultures were prepared from RARα floxed or fmr1−/y mice at postnatal day 7–8 as described previously (Soden and Chen, 2010). At 1 DIV, CA1 of slices from RARα floxed mice were injected with lentiviral vectors expressing CRE recombinase or a truncated and inactive version of Cre (ΔCre), gifts from Dr. Thomas Südhof's laboratory (Stanford University, Stanford, CA; Kaeser et al., 2011), together with different rescue truncated versions of RARα. Lentivirus was produced and purified as described previously (Aoto et al., 2008; Sarti et al., 2012). Pharmacological manipulations of cultured hippocampal slices include the following: RA (2 μm, 4 h) and TTX + CNQX (2 μm + 20 μm, 36 h). Whole-cell patch-clamp recordings from the CA1 region of mouse slice cultures were made at room temperature from 6–9 DIV slices with a 4–6 MΩ borosilicate patch pipette filled with an internal solution containing the following (in mm): 140 CsCl, 2 MgCl2, 5 EGTA, 10 HEPES, 0.3 Na3-GTP, and 4 Na2-ATP, pH 7.35. Slices were continuously superfused with external solution containing the following (in mm): 120 NaCl, 26 NaHCO3, 2.5 KCl, 11 glucose, 2.5 CaCl2, 1.3 MgSO4, and 1.0 NaH2PO4. CNQX (10 μm) and APV (50 μm) were included in the external saline solution. The stimulating electrodes were placed over CA1 stratum radiatum. Synaptic GABA-mediated responses were measured at −60 mV from two adjacent pair of cells where one was infected by the lentiviral vector expressing CRE or ΔCRE recombinase alone or in combination with RARα rescue constructs. Synaptic responses in cell pairs were averaged over 40–50 trials with an interval of 10 s.

Acute slice electrophysiological recordings.

Ten-day-old mice were anesthetized with CO2, and the brains were quickly removed into ice-cold high sucrose solution (HSS) containing the following (in mm): 75 NaCl, 2.5 KCl, 1.25 NaH2PO4, 26 NaHCO3, 25 glucose, 75 sucrose, 4 MgCl2, and 0.5 CaCl2. Coronal slices of 400 μm were made with a vibratome (Leica, VT1200) in HSS. After cutting, slices were immediately moved to 32–34°C artificial CSF (ACSF) containing the following (in mm): 120 NaCl, 26 NaHCO3, 2.5 KCl, 11 glucose, 2 CaCl2, 2 MgSO4, and 1.0 NaH2PO4. ACSF and HSS are balanced with 5% CO2 and 95% O2. Slices were allowed to recover at 32–34°C for 30 min, after which the slices were moved to the room temperature. RA (2 μm) was added to the incubating ACSF at room temperature. To compensate for the loss of RA resulting from oxidation by bubbling with 5% CO2/95% O2, two additional supplements of RA (2 μm) were added 45 min and 90 min after the first treatment. Electrophysiology recordings were done between 2 and 4 h after the first RA treatment. Whole-cell voltage-clamp recordings in CA1 pyramidal neurons were made using borosilicate glass pipettes with tip resistance 3–5 MΩ. mIPSCs were recorded at a holding potential of −60 mV, in the presence of 1 μm TTX, 10 μm CNQX, and 50 μm dAPV, with an internal solution containing the following (in mm): 140 CsCl, 2 MgCl2, 5 EGTA, 10 HEPES, 4 Na2ATP, 0.4 Na3GTP, pH 7.25–7.3. For E/I ratio experiments, we used an internal solution containing the following (in mm): 132 CsMeSO3, 8 CsCl, 10 HEPES, 0.6 EGTA, 4 MgATP, 0.4 Na3GTP, and 10 Na-phosphocreatine (pH adjusted to 7.25–7.30 with CsOH). A glass pipette filled with 1 m NaCl was used as the stimulating electrode, driven by an isolated pulse generator (A-M Systems, model 2100). A separate Ag/AgCl wire in the recording chamber was used as the ground for stimulation. EPSCs were recorded at −67 mV (measured reversal potential of IPSC), and IPSCs at 5 mV (measured reversal potential of EPSC). EPSCs/IPSCs were averaged over 15–30 trials with an interval of 10 s. The Ge, Gi, and the Ge/Gi ratio was calculated for individual neurons, and then Ge/Gi was averaged within a group. The simulation of EPSC/IPSC used the assumption of VEPSC = 0 mV, VIPSC = −65 mV, and that no nonsynaptic active membrane conductance was engaged by synaptic excitation at −60 mV and −50 mV.

All electrophysiological recordings were performed with Multiclamp 700A/B amplifiers and analyzed using Clampfit (Axon Laboratories) and Mini Analysis Program (Synaptosoft).

Surface biotinylation assay.

Biotinylation of surface proteins was performed as previously described (Aoto et al., 2008). Briefly, cultured hippocampal cells were biotinylated with 1 mg/ml Ez-link sulfo-NHS-SS-biotin (Pierce). Biotinylated cells were solubilized with lysis buffer (PBS with 1% Triton-X, 1% NP-40, 10% glycerol, 25 mm MgCl2, and a protease inhibitor mixture). Lysate was bound for 3 h at 4°C using Ultralink-immobilized streptavidin beads to precipitate biotinylated proteins. Biotinylated surface proteins were eluted with denaturing buffer at 75°C. Surface-expressed GABAA receptors were detected by Western blot analysis using anti-β3 antibody (Abcam).

Immunocytochemistry, receptor internalization assay, and image analysis.

We followed procedures previously described (Tracy et al., 2011). For surface staining, coverslips were fixed in 4% PFA and then incubated in blocking solution containing 2% normal goat serum. Primary antibodies were added to the cells followed by flourophore-conjugated secondary antibodies. The primary antibody against the extracellular domain of GABAA receptors subunit β 2/3 was purchased from Millipore. For total receptor staining, cells were fixed with 4% PFA, then permeabilized with blocking solution containing Triton X-100 0.3% and normal goat serum 2%. Images were acquired using Olympus FV1000 BX61WI laser-scanning confocal microscope, using an Olympus Plan Apochromat with sequential acquisition setting at 1024 × 1024 pixel resolution. Puncta staining was analyzed as described previously (Tracy et al., 2011). For the analysis of synaptic proteins, images from the same experiment were thresholded identically by intensity to exclude the diffuse/intracellular pool. Synaptic colocalization was defined as a minimum 2-pixel overlap between the VGAT signal and the GABAAR β2/3 signal. Image quantification was performed blind to treatment group using MATLAB (MathWorks).

In receptor internalization experiments, neurons were incubated with antibody against the extracellular domain of the β2/3 subunit at 37°C for 15 min. Cells were successively washed thoroughly and incubated with either DMSO or RA and fixed at different time points. After the extracellular antibody was revealed with a secondary antibody coupled with Cy3, cells were permeabilized with blocking solution containing Triton X-100 0.3% and normal goat serum 2%. Internalized receptors were revealed by applying a secondary antibody coupled to Cy2. Map2 was used as a dendritic marker. Images were acquired and analyzed as described above.

Statistical analysis.

All graphs represent mean ± SEM values. For each experimental group, N and n represent number of independent experiments and total number of neurons, respectively, and are indicated in the figures. Single-factor ANOVA is used for statistical analysis.


Activity blockade-induced downscaling of inhibitory synaptic transmission is mediated by RA

Similar to previous reports (Kilman et al., 2002; Saliba et al., 2009), we observed that suppressing neuronal activity with TTX + APV effectively downscales synaptic inhibition (Fig. 1A). Treating cultured hippocampal neurons with TTX + APV for 24 h significantly reduced the average amplitude of mIPSCs (control, 38.17 ± 2.00 pA; TTX + APV, 28.03 ± 1.77 pA, p < 0.001) without affecting the mIPSC frequency (control, 1.66 ± 0.23 Hz; TTX + APV, 1.78 ± 0.39 Hz). Importantly, DEAB, a blocker of the RA synthesizing enzyme retinal dehydrogenase (Russo et al., 1988; Wang et al., 2011), prevented the downscaling of mIPSCs induced by TTX + APV treatment (amplitude, 37.29 ± 1.41 pA; frequency, 1.47 ± 0.23 Hz) (Fig. 1A), suggesting that RA synthesis is required for the downscaling of synaptic inhibition in addition to upscaling of synaptic excitation.

Figure 1.
RA mediates homeostatic downscaling of inhibitory synaptic transmission. A, Representative traces (left) and quantification of mIPSC amplitude (middle) and frequency (right) recorded from cultured rat hippocampal neurons treated with control vehicle, ...

We next asked whether RA directly modulates inhibitory synaptic responses. Brief RA treatment (30 min RA + 60 min wash) in cultured hippocampal neurons led to a robust decrease in mIPSC amplitude (control, 35.18 ± 2.30 pA; RA, 26.39 ± 1.60 pA, p < 0.01) without affecting the mIPSC frequency (control, 2.74 ± 0.34 Hz; RA, 2.33 ± 0.5 Hz) (Fig. 1B). Addition of RA to neurons that had been treated with TTX + APV for 24 h did not further decrease the mIPSC amplitude (amplitude, 26.63 ± 1. 10 pA; frequency, 2.33 ± 0.32 Hz) (Fig. 1B), indicating that prior chronic TTX + APV treatment occludes RA-induced downscaling of synaptic inhibition.

These results, together with previous studies showing that reduced excitatory synaptic activity leads to rapid synthesis of RA in neurons (Wang et al., 2011), establish a direct role of RA in the downscaling of synaptic inhibition upon activity blockade.

Downscaling of mIPSCs is not dependent on upscaling of mEPSCs

We next asked whether RA downscales inhibitory synaptic strength indirectly via upscaling of excitatory synaptic transmission. We first tested whether downscaling of mIPSCs still occurred when AMPA receptor (AMPAR) activity was blocked by a selective antagonist (CNQX). We used an activity blockade protocol (TTX + CNQX) that robustly induces synaptic upscaling and blocks both preexisting and newly inserted AMPARs, with the latter as a result of homeostatic scaling (Jakawich et al. 2010; Wang et al., 2011). After 24 h TTX + CNQX treatment, cultured neurons were transferred to ACSF containing TTX + CNQX + APV for mIPSC recordings. We found that the mIPSC amplitude, but not the mIPSC frequency, was again significantly decreased (DMSO, 33.75 ± 1.72 pA, 2.39 ± 0.25 Hz; TTX + CNQX, 25.31 ± 0.91 pA, 2.15 ± 0.15 Hz, p < 0.001) (Fig. 2A). Because CNQX was present throughout the treatment and recording period, increases in synaptic AMPAR responses could not have caused the downscaling of synaptic inhibition.

Figure 2.
Downscaling of synaptic inhibition is independent of upscaling of synaptic excitation. A, Inhibitory synaptic scaling induced by TTX + CNQX (24 h). ***p < 0.001. B, Average mEPSC amplitude and frequency from cultured neurons overexpressing the ...

It is possible that physical insertion (and not activity per se) of AMPARs into synapses mediates RA-dependent downscaling of synaptic inhibition through an unknown interaction. To test this possibility, we transfected a GFP-tagged C-terminal fragment of GluA1 (GluA1C) into cultured hippocampal neurons. Overexpression of GluA1C blocks activity-dependent synaptic trafficking of AMPARs (Shi et al., 2001; Haas et al., 2006). We first asked whether expression of GluA1C blocked synaptic upscaling of mEPSCs. Indeed, compared with GFP-transfected neurons, which exhibited a significant increase in mEPSC amplitude in response to acute RA treatment (DMSO, 9.59 ± 0.44 pA; RA, 12.17 ± 0.55 pA, p < 0.001), GluA1C-expressing neurons failed to respond to RA treatment (DMSO, 8.99 ± 0.46 pA; RA, 8.68 ± 0.41 pA) (Fig. 2B). By contrast, in the same experiments, the RA-dependent downscaling of mIPSCs was not affected by GluA1C overexpression (GFP/DMSO, 31.20 ± 3.06 pA; GFP/RA, 18.00 ± 1.86 pA; GluA1C/DMSO, 30.46 ± 2.98 pA; GluA1C/RA, 18.35 ± 1.35 pA, p < 0.001) (Fig. 2C). The frequency of mEPSCs and mIPSCs was not affected by GluA1C overexpression or by RA treatment (Fig. 2B,C).

Together, these data indicate that upscaling of excitatory synaptic transmission and downscaling of inhibitory synaptic transmission are independent parallel processes triggered by RA.

Reduced GABAAR abundance underlies homeostatic downscaling of synaptic inhibition

How does RA reduce synaptic inhibition? The lack of a change in mIPSC frequency suggests a postsynaptic mechanism (i.e., reduced postsynaptic GABAAR abundance). We therefore performed surface protein biotinylation experiments to examine the surface abundance of GABAARs after RA treatment or activity blockade. Both acute RA and chronic activity blockade with TTX + APV significantly reduced the amount of GABAARs on the neuronal surface (RA, 77.3 ± 5.20% of DMSO control, p < 0.01; TTX + APV, 56.82 ± 1.67% of vehicle control, p < 0.001) (Fig. 3A,B).

Figure 3.
Activity blockade or RA treatment led to a loss of total synaptic and surface GABAA receptors. A, Surface biotinylation assay for GABAAR β3 subunit in cultured hippocampal rat neurons treated with RA. **p < 0.01. B, Surface biotinylation ...

To further examine whether the synaptic abundance of GABAARs is affected by RA- or activity blockade-induced downscaling of synaptic inhibition, we performed immunocytochemistry experiments that measured the abundance of synaptic surface-exposed GABAARs. We used an antibody to GABAAR β2/3 subunits that recognizes an extracellular epitope to probe surface receptors in nonpermeabilized neurons, using vesicular GABA transporter (vGAT) immunolabeling as a general marker for inhibitory synapses. Both acute RA treatment and chronic activity blockade significantly reduced the synaptic abundance of GABAAR, manifested as reduced integrated puncta intensity (DMSO, 100 ± 6.03%; RA, 77.04 ± 2.70%; TTX + APV, 77.49 ± 2.93%; TTX + CNQX, 71.04 ± 3.62%; ***p < 0.001), average puncta intensity (DMSO, 100 ± 1.70%; RA, 90.08 ± 1.19%; TTX + APV, 93.57 ± 1.26%; TTX + CNQX, 89.45 ± 1.46%; **p < 0.05; ***p < 0.001), and puncta size (DMSO, 100 ± 4.66%; RA, 84.28 ± 2.37%; TTX + APV, 81.8 ± 2.61%; TTX + CNQX, 77.14 ± 2.85%; **p < 0.05; ***p < 0.001) (Fig. 3C,D). The same observations were made when the staining was performed under permeabilized conditions to examine the total abundance of synaptic GABAARs (data not shown). We also analyzed vGAT signals and found that none of the treatment significantly alter the vGAT puncta intensity, size, or density (data not shown). The RA-induced reduction in synaptic abundance of GABAARs corroborates our observation that RA decreases mIPSC amplitudes (Fig. 1B) and also leads to a decrease in evoked IPSC (eIPSC) amplitudes (see below).

Surface GABAARs are constantly recycled (Kittler et al., 2000). Therefore, the reduced synaptic abundance of GABAARs could be caused by enhanced endocytosis or reduced exocytosis of GABAARs. To distinguish between these two possibilities, we directly measured surface GABAAR endocytosis using antibody labeling for GABAARs in live neurons. After a 15 min incubation at 37°C with a primary antibody recognizing the β2/3 subunit of GABAARs, neurons were treated with DMSO or RA for an additional 15, 30, 45, and 60 min. The remaining surface localized and internalized β2/3 receptors were labeled in the neurons after fixation without and with permeabilization. Consistent with the results from the immunostaining of synaptic GABAARs (Fig. 3C,D), RA treatment significantly reduced surface GABAARs at the 60 min time point (DMSO, 94.71 ± 5.21%; RA, 81.25 ± 3.70%; p < 0.05) (Fig. 4A,B). Importantly, although surface GABAARs are fairly stable upon DMSO treatment, RA treatment significantly increased the proportion of endocytosed GABAARs at the earlier time points of <60 min (30 min: DMSO, 106.70 ± 4.00%, RA, 121.41 ± 5.97%, p < 0.05; 45 min: DMSO, 100.75 ± 4.25%, RA, 150.18 ± 6.53%; p < 0.001) (Fig. 4B,C). We observed a significant decrease in the endocytosed GABAAR pool in the RA group at the 60 min time point (Fig. 4C), probably because of lysosomal degradation of internalized receptors (Kittler et al., 2004).

Figure 4.
RA treatment enhances endocytosis of surface GABAARs. A, Representative images of endocytosis assay. Neurons were live-labeled with GABAAR β2/3 antibody, treated with DMSO or RA, and then fixed at different time points and stained for endocytosed ...

We next asked whether blocking clathrin-mediated endocytosis by overexpression of a dominant-negative mutant of dynamin I (the K44E substitution) (Chu et al., 1997) blocks RA's effect on mIPSCs. Dynamin WT or mutant constructs were cotransfected with GFP in 10–11 DIV cultured neurons, and recordings were performed 3 d later. Dynamin I K44E overexpression has been previously reported to increase GABAAR surface density in a mammalian cell line (Herring et al., 2003), but no effect of mutant dynamin on basal inhibitory transmission in cultured neurons has been described previously. Here, we found that basal transmission was not affected by overexpressing the dominant-negative K44E (DMSO treated: WT dynamin I, 26.39 ± 1.65 pA; dynamin I K44E, 26.13 ± 1.58 pA) (Fig. 4D). However, dynamin I K44E-expressing neurons failed to respond to RA treatment (RA treated: WT dynamin I, 19.17 ± 1.02 pA, p < 0.001; dynamin I K44E, 26.52 ± 1.87 pA) (Fig. 4D). Thus, endocytosis of GABAAR is required for synaptic downscaling.

Nongenomic action of RA/RARα mediates the downscaling of synaptic inhibition

The effect of RA on excitatory synaptic transmission is mediated by a novel mechanism that does not require transcriptional regulation but operates through translational derepression of mRNAs that are bound to RARα (Aoto et al., 2008; Poon and Chen, 2008; Sarti et al., 2012). We asked whether the action of RA on inhibitory synaptic transmission uses a similar nongenomic mechanism. The transcription inhibitor actinomycin D had no effect on the RA-induced reduction of mIPSC amplitude (DMSO, 35.89 ± 3.37 pA; RA, 23.01 ± 1.50 pA; RA + actinomycin D, 25.19 ± 2.00 pA; p < 0.01), whereas inhibitors of protein synthesis completely abolished RA's effect on the mIPSC amplitude (RA + anisomycin, 34.79 ± 3.04 pA; RA + cycloheximide, 35.91 ± 2.26 pA) (Fig. 5 A).

Figure 5.
New protein synthesis and non-nuclear functions of RARα are required for downscaling of inhibitory synaptic transmission. A, Amplitude and frequency analysis of mIPSCs obtained from rat hippocampal neurons cotreated with transcription (actinomycin) ...

The RA receptor RARα is required for RA's effect on synaptic excitation because both shRNA-mediate knockdown and Cre-recombinase-mediated conditional knock RARα eliminated RA's action on excitatory synaptic transmission and blocked homeostatic upregulation of synaptic excitation (Aoto et al., 2008; Sarti et al., 2012). To investigate the requirement for RARα in downscaling of synaptic inhibition, we infected CA1 pyramidal neurons from conditional RARα KO mice (RARαfl/fl) with lentivirus expressing either an active or inactive GFP-tagged Cre-recombinase (Cre or ΔCre) (Kaeser et al., 2011). We recorded eIPSCs simultaneously from an infected and an uninfected neuron adjacent to each other by stimulating the region of stratum radiatum next to the two neurons (Fig. 5B). This allows us to directly compare the size of eIPSCs of the infected and the uninfected neurons. Based on our observations above on the mIPSC amplitudes and synaptic GABAAR surface expression (Figs. 1B and Fig. 3), RA is expected to reduce eIPSCs as well. Therefore, neurons with impaired downscaling of synaptic inhibition should exhibit bigger eIPSCs compared with wild-type neurons. Indeed, although knock-out of RARα did not affect basal inhibitory synaptic transmission (Cre, 89.18 ± 9.25 pA; uninfected, 96.64 ± 9.40 pA) (Fig. 5C), RA treatment reduced the eIPSC amplitudes in uninfected neurons, rendering them significantly smaller than those from neighboring Cre-recombinase expressing RARα KO neurons (Cre, 112.41 ± 27.17 pA; uninfected, 58.47 ± 13.19 pA) (Fig. 5C), indicating that the RA-induced downregulation of eIPSC is significantly impaired in RARα KO neurons. This effect is not the result of side effects of viral injection as infection with lentivirus expressing the inactive Cre (ΔCre) did not cause such changes (DMSO/ΔCre, 98.5 ± 11.80 pA; DMSO/uninfected, 97.70 ± 9.35 pA; RA/ΔCre, 122.67 ± 14.40 pA; RA/uninfected, 123.62 ± 11.19 pA) (Fig. 5D).

Structure–function analysis showed that different domains of RARα are associated with different functions. Whereas the DNA-binding domain (DBD) mediates its nuclear function (Evans, 1988; Green and Chambon, 1988; Tasset et al., 1990), the C-terminal LBD/F domain is required for the nongenomic action of RARα through RA and mRNA binding (Poon and Chen, 2008; Sarti et al., 2012). The deletion mutants of RARα thus provide useful tools to probe the involvement of different functions of RARα in downscaling of synaptic inhibition when expressed in RARα KO neurons. Coexpression of RARα LBD/F with Cre restored RA-induced homeostatic downregulation of eIPSCs (DMSO/Cre + LBD/F, 116.35 ± 11.92 pA; DMSO/uninfected, 117.80 ± 15.46 pA; RA/Cre + LBD/F, 95.04 ± 9.94 pA; RA/uninfected, 86.72 ± 8.40 pA) (Fig. 5E). By contrast, coexpression of RARα DBD failed to rescue downscaling of eIPSCs (DMSO/Cre + DBD, 108.46 ± 15.14 pA; DMSO/uninfected, 97.79 ± 10.12 pA; RA/Cre + DBD, 130.74 ± 12.64 pA; RA/uninfected, 83.39 ± 11.65 pA) (Fig. 5F). These data indicate that the nuclear function of RA and RARα is not involved in the action of RA at inhibitory synapses.

RA alters the synaptic excitation/inhibition balance in acute hippocampal slices

Given the rapid action of RA on synapses, we wondered whether we could reproduce the effect of RA observed in cultured neurons and cultured slices also in acute slices, where local circuits are better preserved than in culture preparations. Incubation of acute hippocampal slices from young mice (P10) with RA (2 μm) induced significant downscaling of mIPSCs recorded from CA1 pyramidal neurons (DMSO, 28.08 ± 0.84 pA; RA, 23.40 ± 0.54 pA, p < 0.001) (Fig. 6A). The mIPSC frequency was not affected (DMSO, 0.99 ± 0.09 Hz; RA, 1.06 ± 0.06 Hz) (Fig. 6B).

Figure 6.
RA induces downscaling of synaptic inhibition and increases excitation/inhibition ratio in acute hippocampal slices. A, Representative traces and amplitude analysis of mIPSC recordings obtained from CA1 pyramidal neurons of acute hippocampal slices incubated ...

Our data suggest that RA, by acting both on synaptic excitation and inhibition, can rapidly and robustly shift the E/I balance of synaptic inputs to a neuron. EPSCs and IPSCs exhibit different rise and decay kinetics. Moreover, inhibitory and excitatory synapses often display different release probabilities and distinct forms of short-term plasticity (depressing vs facilitating synapses) (Zucker, 1989). Therefore, the E/I ratio of a given set of inputs can exhibit rapid dynamics within a pulse (resulting from difference in EPSC and IPSC kinetics) and from pulse to pulse (resulting from difference in short-term plasticity) in a high-frequency burst of action potentials. Given that RA reduces both mIPSCs and eIPSCs, we set out to explore its effect on synaptic E/I balance with evoked responses. We stimulated the stratum radiatum with a 5-pulse 25 Hz stimulus train and recorded eEPSCs and eIPSCs in the same neurons (Fig. 6C). We found that the synaptic excitatory/inhibitory conductance ratio (Ge/Gi) changed significantly over time (Fig. 6D). For each pulse, because of the more rapid onset and faster rise times of EPSCs than those of IPSCs, the synaptic Ge/Gi ratio was high at the beginning of each response. This was even more evident for the first pulse as Gi was near zero when Ge ramped up rapidly. But the Ge/Gi ratio decreased rapidly within 10 ms of stimulus onset as soon as inhibition increased (Fig. 6D). Additionally, the peak Ge/Gi for each pulse exhibited an overall decreasing trend because of the slow decay kinetics of synaptic inhibition (Fig. 6D). RA treatment significantly increased the peak Ge/Gi (Fig. 6D, red traces).

Downscaling of inhibitory synaptic transmission is absent in Fmr1 KO neurons

Activity blockade induces RA synthesis in neurons from Fragile-X model mice (Fmr1 KO), but both synaptic activity blockade- and RA-induced upscaling of excitatory synaptic transmission are absent (Soden and Chen, 2010). These data demonstrated a critical role of FMRP, the protein encoded by fmr1, in synaptic RA signaling and homeostatic synaptic plasticity. We thus asked whether FMRP is specifically required only for homeostatic regulation of excitatory synaptic strength or is universally involved in RA-mediated regulation of both synaptic excitation and synaptic inhibition.

We found that TTX + CNQX treatment produced no reduction in the mIPSC amplitude of neurons in organotypic cultured hippocampal slices from Fmr1 KO mice but caused a robust reduction of the mIPSC amplitude in wild-type slices (WT/DMSO, 31.77 ± 1.78 pA; WT/TTX + CNQX, 22.68 ± 1.40 pA; KO/DMSO, 29.08 ± 1.35 pA; KO/TTX + CNQX, 29.99 ± 1.44 pA) (Fig. 7A). Moreover, RA significantly decreased the mIPSC amplitude in WT but not Fmr1 KO neurons (WT/DMSO, 31.38 ± 2.56 pA; WT/RA, 21.62 ± 1.30 pA; KO/DMSO, 28.86 ± 1.12 pA; KO/RA, 28.72 ± 1.19 pA) (Fig. 7B). The frequency of mIPSCs was not altered by RA in either WT or Fmr1 KO slices (Fig. 7B). Therefore, FMRP is required for homeostatic regulation of both synaptic inhibition and excitation.

Figure 7.
RA-mediated downscaling of synaptic inhibition is absent in Fmr1 KO neurons. A, Representative traces (top) and quantification (bottom) of mIPSCs recorded from WT or Fmr1 KO CA1 pyramidal neurons in cultured hippocampal slices treated with DMSO or TTX ...

We next examined the effect of RA on the synaptic E/I balance in acute slices from the Fmr1 KO mice. Although the basal Ge/Gi ratio was similar to that of the wild-type neurons, RA failed to shift the Ge/Gi balance (Fig. 7C,D), confirming our observation in cultured slices that RA-dependent regulation of synaptic strength is missing in the absence of FMRP expression.

RA alters neuronal excitability through modulation of the synaptic E/I balance

What could be the functional impact of such an RA-dependent shift in synaptic Ge/Gi? Although the synaptic Ge/Gi ratio resides largely well <1, the actual synaptic E/I balance is the result of the interaction between the driving forces of ion fluxes (dictated by the membrane potential and the reversal potentials of EPSCs and IPSCs) and the synaptic conductance. We therefore simulated synaptic EPSC/IPSC ratios in a 25 Hz 5-pulse train in two scenarios that neurons commonly experience, a resting condition (Vm = −60 mV) and a partly depolarized condition (Vm = −50 mV, just below the action potential firing threshold), using the Ge/Gi ratio calculated from our recordings (Fig. 6C,D). We adopted well-accepted reversal potentials of EPSCs and IPSCs (EEPSC = 0 mV, EIPSC = −65 mV). At −60 mV, synaptic excitation dominates inhibition at the onset of each stimulus, even in the DMSO-treated condition, because of the vast difference between driving forces (60 mV for EPSC and 5 mV for IPSC), and RA treatment significantly exaggerated the dominance of synaptic excitation (Fig. 8A). By contrast, at Vm = −50 mV, the synaptic excitation was largely shunted by inhibition because of the shift in driving force after the first pulse (Fig. 8B). RA treatment significantly increased the synaptic EPSC/IPSC ratio and restored the dominance by excitation (Fig. 8B). Thus, for a neuron in a slightly depolarized state, RA robustly enhances the firing probability induced by a bursting input through reversing the E/I balance. In the Fmr1 KO mouse, because of the deficiency in synaptic RA signaling and homeostatic synaptic plasticity, such modification of the E/I balance is lost (Fig. 8C,D).

Figure 8.
RA alters neuronal excitability. A, Simulated EPSC/IPSC ratio in DMSO- or RA-treated wild-type neurons at resting membrane potential (−60 mV). EPSC/IPSC = (Vm − EEPSC)/(Vm − EIPSC) * (Ge/Gi), using Ge/Gi values obtained in Figure ...


In this study, we show that RA mediates homeostatic downscaling of synaptic inhibition and that, similar to RA-dependent upscaling of synaptic excitation, RA-dependent downscaling of synaptic inhibition requires FMRP (Soden and Chen, 2010). Blocking RA synthesis completely prevented the activity blockade-induced downscaling of synaptic inhibition. Direct application of RA rapidly and robustly suppressed synaptic inhibition by triggering the removal of GABAARs from synapses. The effect of RA on synaptic inhibition was occluded by prolonged synaptic activity blockade. Similar to RA-induced increase in synaptic excitation, the RA-induced decrease in synaptic inhibition required protein synthesis but not gene transcription, and involved a nontranscriptional function of RARα. However, the upscaling of synaptic excitation and downscaling of synaptic inhibition by RA were not dependent on each other because blocking excitatory upscaling did not affect inhibitory downscaling, suggesting that RA acts as a master organizer of neuronal activity by independently regulating excitatory and inhibitory synapses. In organizing the activity of neurons, RA appears to activate parallel cellular pathways to modulate synaptic excitation and inhibition in a coordinated fashion. The result of such orchestrated modulation in response to reduced synaptic excitation is a rapid increase in the synaptic E/I ratio, which may be responsible for subsequent changes in Hebbian plasticity at the affected synapses (Chen et al., 2013).

GABAARs mediate most fast synaptic inhibition in the CNS. Modulation of GABAAR trafficking to and out of synapses underlies many neuronal excitability changes under both physiological and pathological conditions (reviewed by Luscher et al., 2011). Endocytosis of GABAARs occurs primarily through clathrin- and dynamin-dependent mechanisms and requires interactions of GABAAR β and γ subunits with the clathrin adaptor protein AP2 (McDonald et al., 1998; Brandon et al., 2000, 2002, 2003; Kittler et al., 2000, 2005, 2008; Smith et al., 2008). We found that a dominant-negative dynamin mutant blocked the RA-mediated reduction of synaptic inhibition (although somewhat surprisingly, it did not affect basal inhibitory transmission), suggesting that inhibitory downscaling is mediated by enhanced endocytosis of GABAARs. Interestingly, the effect of RA on inhibitory synapses also required de novo protein synthesis, suggesting that a newly synthesized protein activates GABAAR endocytosis. No such protein has yet been described; indeed, the very existence of a protein synthesis-dependent endocytosis pathway is novel.

Although RA's action at excitatory and inhibitory synapses both require protein synthesis and expression of FMRP, the end result of the two processes is diametrically opposite: upscaling of synaptic excitation involves new synthesis of AMPARs that are then inserted into synapses, whereas downscaling of synaptic inhibition involves new protein synthesis that causes the removal of GABAARs. This raises the question of whether our previous view that upscaling of synaptic excitation is simply the result of new AMPAR synthesis may have been too limited, and whether upscaling may also involve new synthesis of a regulatory protein that controls synaptic AMPAR trafficking, in addition to stimulating new AMPAR synthesis itself. Thus, we would like to posit that the protein synthesis-dependent actions of RA may be more regulatory than executive for both upscaling and downscaling, and involve the synthesis of one or several short-lived protein core factors that then promote both AMPAR insertion and GABAR endocytosis. This hypothesis provides the simplest explanation for all available data, but alternative, more complicated scenarios, such as multiple independent regulatory and executive pathways, cannot be ruled out.

RA is the first molecule identified that mediates homeostatic heterosynaptic regulation of inhibitory synapses. This role of RA is similar to that of endocannabinoids, BDNF, and nitric oxide in mediating heterosynaptic forms of inhibitory synaptic plasticity (e.g., i-LTD or i-LTP) (reviewed by Castillo et al., 2011). Moreover, endocannabinoids, BDNF, and nitric oxide also act on excitatory synapses, such as RA. Likewise, TNFα has been shown to induce a rapid insertion of AMPA receptors and endocytosis of GABAA receptors (Stellwagen et al., 2005). However, RA signaling exhibits one fundamental distinction: i-LTP and i-LTD are induced by activation of excitatory synapses and an increase in dendritic calcium levels, whereas RA-mediated regulation of synaptic inhibition and excitation is triggered by silencing excitatory synapses and a decrease in dendritic calcium levels. Thus, RA acts as a critical component of the feedback loop linking reduced synaptic excitation to shifts in synaptic E/I balance through homeostatic upregulation of excitatory synaptic strength and downregulation of inhibitory synaptic strength.

Throughout the development of sensory systems, the E/I balance is thought to be generally well preserved. Balanced synaptic excitation and inhibition (e.g., feedforward excitation vs feedforward inhibition) are critical for network stability and information processing (Liu et al., 2007; House et al., 2011; Zhang et al., 2011). Failure to maintain a proper E/I balance has been linked to neurological disorders, including epilepsy, schizophrenia, and autism spectrum disorders (Rubenstein and Merzenich, 2003; Lewis et al., 2005; Ramocki and Zoghbi, 2008; Südhof, 2008; Chao et al., 2010). In the mouse model of Fragile-X syndrome (the Fmr1 KO), an imbalance of excitation and inhibition and network hyperexcitability was reported in layer 4 of the barrel cortex (Gibson et al., 2008). Additionally, we observed a complete absence of RA-mediated homeostatic regulation of both synaptic excitation (Soden and Chen, 2010) and inhibition (Fig. 1). Moreover, although the E/I ratio in the hippocampal CA1 region appears to be similar between WT and Fmr1KO neurons (likely through compensation at the circuit level), the ability of RA to alter the E/I ratio in a stimulus-dependent fashion is lost in Fmr1KO neurons (Fig. 7).

As the mechanistic links between E/I imbalance and altered social behavior are just beginning to be uncovered (Yizhar et al., 2011), future investigations are needed to provide molecular, cellular, and circuitry explanations for the behavioral abnormalities in psychiatric diseases. The ability of RA to activate two independent and parallel pathways that mediate concomitant upscaling of synaptic excitation and downscaling of synaptic inhibition allows a greater dynamic range for synaptic homeostasis organized by one single molecule. Thus, RA is a unique synaptic signaling molecule that may play an instructive role in sculpting synaptic inputs based on their activity history to enable efficient encoding, processing, and storing of stimulus-specific information.


This work was supported by National Institute of Mental Health Grants 1P50MH86403 and 1R01MH091193 to L.C.

The authors declare no competing financial interests.


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