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Logo of nihpaAbout Author manuscriptsSubmit a manuscriptHHS Public Access; Author Manuscript; Accepted for publication in peer reviewed journal;
N Engl J Med. Author manuscript; available in PMC 2012 December 27.
Published in final edited form as:
PMCID: PMC3530919

Thrombomodulin Mutations in Atypical Hemolytic–Uremic Syndrome



The hemolytic–uremic syndrome consists of the triad of microangiopathic hemolytic anemia, thrombocytopenia, and renal failure. The common form of the syndrome is triggered by infection with Shiga toxin–producing bacteria and has a favorable outcome. The less common form of the syndrome, called atypical hemolytic–uremic syndrome, accounts for about 10% of cases, and patients with this form of the syndrome have a poor prognosis. Approximately half of the patients with atypical hemolytic–uremic syndrome have mutations in genes that regulate the complement system. Genetic factors in the remaining cases are unknown. We studied the role of thrombomodulin, an endothelial glycoprotein with anticoagulant, antiinflammatory, and cytoprotective properties, in atypical hemolytic–uremic syndrome.


We sequenced the entire thrombomodulin gene (THBD) in 152 patients with atypical hemolytic–uremic syndrome and in 380 controls. Using purified proteins and cell-expression systems, we investigated whether thrombomodulin regulates the complement system, and we characterized the mechanisms. We evaluated the effects of thrombomodulin missense mutations associated with atypical hemolytic–uremic syndrome on complement activation by expressing thrombomodulin variants in cultured cells.


Of 152 patients with atypical hemolytic–uremic syndrome, 7 unrelated patients had six different heterozygous missense THBD mutations. In vitro, thrombomodulin binds to C3b and factor H (CFH) and negatively regulates complement by accelerating factor I–mediated inactivation of C3b in the presence of cofactors, CFH or C4b binding protein. By promoting activation of the plasma procarboxypeptidase B, thrombomodulin also accelerates the inactivation of anaphylatoxins C3a and C5a. Cultured cells expressing thrombomodulin variants associated with atypical hemolytic–uremic syndrome had diminished capacity to inactivate C3b and to activate procarboxypeptidase B and were thus less protected from activated complement.


Mutations that impair the function of thrombomodulin occur in about 5% of patients with atypical hemolytic–uremic syndrome.

The hemolytic–uremic syndrome consists of the triad of microangiopathic hemolytic anemia, thrombocytopenia, and acute renal failure. It is one of the thrombotic microangiopathies, along with thrombotic thrombocytopenia purpura and preeclampsia.1 The hemolytic–uremic syndrome is the most common cause of acute renal failure among children, a condition for which 50 to 75% of patients require dialysis.2 More than 85% of cases of the hemolytic–uremic syndrome are referred to as “typical”; these are preceded by diarrhea caused by strains of Escherichia coli35 that produce Shiga-like toxins, which have proinflammatory and prothrombotic effects on the vascular endothelium.6 Most cases of typical hemolytic–uremic syndrome have a favorable outcome, although in approximately 25% of the patients, there is residual renal dysfunction. In contrast, the less common, “atypical,” form of the hemolytic–uremic syndrome is not linked to Shiga toxin–producing bacteria; it may be familial or sporadic, it often recurs, and it almost always follows an aggressive course. End-stage renal failure develops in 50% of patients with atypical hemolytic–uremic syndrome, and 25% of patients die as a result of the syndrome.7

An association between atypical hemolytic–uremic syndrome and uncontrolled complement activation has been established.8 Approximately 50% of patients have heterozygous loss-of-function mutations in genes encoding inhibitors of the alternative pathway of the complement system: factor H (CFH),9,10 factor I (CFI),11 membrane cofactor protein (MCP),12,13 CFH-related proteins (CFHR),14 and C4b binding protein (C4bBP).15 Gain-of-function mutations in genes encoding factor B (CFB)16 and C3,17 which promote alternative-pathway activation, have been reported in a few cases, and antibodies against CFH have been observed in 2 to 10% of patients14,18 (Fig. 1). The cause of atypical hemolytic–uremic syndrome in the remaining 50% of cases is unknown.

Figure 1
Alternative Pathway of Complement Activation and Regulation

Several lines of evidence point to a role of thrombomodulin in the pathogenesis of atypical hemolytic–uremic syndrome. Thrombomodulin is a ubiquitous transmembrane endothelial-cell glycoprotein. It accelerates thrombin-mediated activation of protein C,19 which down-regulates further thrombin generation, thereby suppressing clot formation. Activated protein C also has antiinflammatory and cytoprotective properties.20 Thrombomodulin enhances thrombin-mediated activation of plasma procarboxypeptidase B (thrombin activatable fibrinolysis inhibitor [TAFI]), an inhibitor of fibrinolysis21 that also inactivates complement-derived anaphylatoxins C3a and C5a.2224 Thrombomodulin, through its lectin-like domain, interferes with inflammation by suppressing leukocyte trafficking and dampening complement activation.25,26

The strategic location of thrombomodulin throughout the vasculature and its role in regulating coagulation, innate immunity, and complement activation led us to hypothesize that variants of the gene encoding thrombomodulin (THBD) confer a predisposition to endothelial injury and microvascular thrombosis, which is manifested clinically as the atypical hemolytic–uremic syndrome. We identified six THBD variants in seven patients with atypical hemolytic–uremic syndrome. We also showed that thrombomodulin is a negative regulator of the complement system and that thrombomodulin mutations associated with atypical hemolytic–uremic syndrome cause defective complement regulation.



We recruited for this study 152 consecutive patients with atypical hemolytic–uremic syndrome from the International Registry of Recurrent and Familial HUS/TTP.27 A diagnosis of atypical hemolytic–uremic syndrome was made in patients who had one or more episodes of microangiopathic hemolytic anemia and thrombocytopenia associated with acute renal failure.28 Patients in whom the hemolytic–uremic syndrome was associated with Shiga toxin–producing bacteria were excluded. Healthy controls, unrelated to each other or to the patients, were matched according to sex and geographic origin. Details of the diagnostic criteria and participant selection are provided in the Methods section in the Supplementary Appendix, available with the full text of this article at

We screened these 152 patients for mutations in CFH, MCP, CFI, and THBD. Patients with THBD mutations were also screened for CFB and C3 mutations. Since functional abnormalities in the von Willebrand factor–cleaving metalloproteinase, ADAMTS13, have been associated with atypical hemolytic–uremic syndrome, we also measured its activity with the use of a collagen-binding assay when possible.29 The study was approved by the bioethics committee of the Province of Bergamo, Italy. Participants or their legal guardians provided written informed consent.


Complement componentEffect on Complement ActivationMajor Functions*
Alternative pathwayPromotesOne of three complement pathways that opsonize and kill pathogens, it is antibody-independent, is activated by spontaneous hydrolysis of C3 in plasma, and is amplified by C3b deposition on the surface of pathogens
C3 convertasePromotesEnzyme complex (C3bBb) that cleaves C3 to C3a and C3b
C4b binding protein (C4bBP)SuppressesCirculating cofactor for CFI-mediated inactivation of C3b and C4b
C5 convertasePromotesEnzyme complex (C3b2Bb) that cleaves C5 to C5a and C5b
CFH-related proteins (CFHR)SuppressCirculating proteins derived from ancestral duplications of CFH gene; a regulatory function has been suggested by their ability to bind C3b
Complement factor B (CFB)PromotesA circulating zymogen that, after binding to C3b, is cleaved by CFD, generating an active subunit Bb; it allows formation of the C3 and C5 convertases, thereby promoting complement activation
Complement factor C3 (C3)PromotesA circulating zymogen and a major component necessary for activation of the complement cascade
Complement factor C3a (C3a)PromotesA complement activation fragment of C3, that is a potent anaphylatoxin
Complement factor C3b (C3b)PromotesA key component of complement activation, it is a cleavage product of C3 that binds to the surfaces of cells and pathogens and promotes complement activation and opsonization
Complement factor C5 (C5)PromotesA circulating zymogen and major component necessary for activation of the complement cascade
Complement factor C5a (C5a)PromotesA complement activation fragment of C5, that is a potent anaphylatoxin
Complement factor D (CFD)PromotesA circulating serine protease that activates CFB
Complement factor H (CFH)SuppressesCirculating cofactor for CFI-mediated inactivation of C3b
Complement factor I (CFI)SuppressesCirculating serine protease that inactivates C3b and C4b
iC3bSuppressesCFI-inactivated form of C3b that cannot promote complement activation
Membrane attack complex (MAC)PromotesPore-like structures made by one molecule of C5b and one molecule each of C6, C7, C8 and C9 (C5b-9) that insert into the cell membranes, causing lysis
Membrane cofactor protein (MCP)SuppressesMembrane-bound complement inhibitor with cofactor activity for CFI-mediated inactivation of C3b and C4b
*These functions were selected for relevance to the current report.


The sequencing methods and in vitro assays that were used to measure the effects of purified thrombomodulin or cell-surface thrombomodulin on the generation and deposition of C3b proteolytic fragments and on thrombin-mediated activation of TAFI are described in the Methods section in the Supplementary Appendix. A description of the statistical analyses is also included in the Supplementary Appendix.



We sequenced bidirectionally the entire coding region of the THBD gene (which lacks introns) in 380 controls and 152 patients with atypical hemolytic–uremic syndrome: 31 patients with CFH mutations (20.4%), 1 with anti-CFH antibodies (0.7%), 10 with MCP mutations (6.6%), and 5 with CFI mutations (3.3%). Six amino acid–changing, heterozygous mutations of THBD were identified in seven unrelated patients (4.6%); none of these mutations were found in the controls. None of the 380 controls had any synonymous or nonsynonymous single-nucleotide polymorphisms (SNPs) within the coding region, with the exception of a known common THBD coding SNP (rs1042579), a C→T change at base 1418, leading to replacement of alanine 473 by valine (A473V).30 Genotyping was confirmed with the use of the Sequenom MassARRAY system31; this system was also used to determine the frequency of A473V and the other known THBD variants (including those within the 5′ and 3′ untranslated regions) in 268 additional healthy subjects (see details of genotyping and SNP analyses in the Methods section in the Supplementary Appendix). The allele frequencies of the A473V SNP did not differ significantly between patients with atypical hemolytic–uremic syndrome and controls (P = 0.93). This was also the case for six common SNPs in the 5′ and 3′ untranslated regions of THBD (rs1040585, rs2424505, rs6076016, rs1042580, rs3176123, and rs1962) (Table 1 in the Supplementary Appendix). Clinical data and pedigrees of mutation carriers are provided in Table 1 and Figure 2 and in the case reports in the Supplementary Appendix.

Figure 2
Pedigrees of Patients with Familial Atypical Hemolytic–Uremic Syndrome
Table 1
Characteristics of Patients with Atypical Hemolytic–Uremic Syndrome and Thrombomodulin Gene Mutations.*

Three patients (two with a family history of atypical hemolytic–uremic syndrome [Patients F635 and F163] and one with sporadic atypical hemolytic–uremic syndrome [Patient S884]) were heterozygous for mutations that cause amino acid changes in the lectin-like domain of thrombomodulin (A43T in Patient F635, D53G in Patient F163, and V81L in Patient S884).

Patient F635 had had several episodes of the hemolytic–uremic syndrome in infancy, leading to chronic renal failure. He had eight siblings, three of whom had died during acute episodes of the hemolytic–uremic syndrome. A sister (Patient F961), who also carried the A43T mutation, had had one episode of the hemolytic–uremic syndrome during infancy. The mother (Patient F962) and another sibling (Patient F964) were also heterozygous carriers, but neither they nor the other siblings had symptoms or signs of the hemolytic–uremic syndrome (Pedigree 185 in Fig. 2).

In Pedigree 008 (Fig. 2), the unaffected brother and mother of Patient F163 carried the D53G mutation, whereas the father did not. The deceased sibling was not tested.

Four additional patients with sporadic atypical hemolytic–uremic syndrome (Patients S511, S015, S665, and S924) had missense mutations in the serine–threonine-rich region of thrombomodulin (P495S in Patient S511, P501L in Patient S015, and D486Y in Patients S665 and S924, who were not related to each other).

In the case of all carriers of the thrombomodulin mutation, the disease was evident during childhood, and in two patients (F163 and S884), it was preceded by a viruslike illness. No patient carried a concurrent mutation in CFH, MCP, CFI, CFB, or C3, nor did any of them have anti-CFH auto-antibodies. ADAMTS13 activity was normal in Patients S015, S884, F163, and S703. Four of the patients with thrombomodulin mutations (F635, F163, S884, and S511) had low serum C3 levels. C4 levels were normal in all the patients. These findings suggest that thrombomodulin mutations are associated with excess activation of the alternative complement pathway.9


To test whether genetic variations of THBD contribute to the activation of complement, we examined the ability of wild-type and mutant thrombomodulin to provide protection against complement activation on the cell surface.3234 CHO-K1 cells were stably transfected with empty vector (control) or with vector expressing thrombomodulin. Complement activation was induced by incubating cells with complement-fixing anti-CHO antibodies, followed by C6-depleted serum. Staining of total C3b plus inactivated C3b (iC3b) (with an anti-C3c antibody that recognizes both C3b and iC3b) and of iC3b alone (with a specific anti-iC3b antibody) was quantified by flow cytometry. The expression of wild-type thrombomodulin, as compared with the control vector, resulted in an increase by a median factor of 2.6 (range 2.4 to 2.7) in the percentage of C3b that was cleaved to iC3b on the cell surface, as calculated by the ratio of iC3b to (C3b+iC3b) on staining (Fig. 3A). This indicates that thrombomodulin provides protection against complement activation.

Figure 3
Effect of Mutations Associated with Atypical Hemolytic–Uremic Syndrome on the Ability of Thrombomodulin to Enhance Complement Inactivation

As compared with CHO-K1 cells that were transfected with wild-type thrombomodulin, all cells that were transfected with the other thrombomodulin variants were less effective in converting C3b to iC3b on the cell surface after immune-complex–initiated complement activation (Fig. 3A).


Inactivation of surface-bound C3b depends on the binding of CFH to heparan sulfate molecules and C3b. CFH mutations associated with atypical hemolytic–uremic syndrome disrupt such binding to endothelial cells, diminishing the capacity of CFH to suppress complement activation.35 Since thrombomodulin is present on the surface of all endothelial cells, we tested whether it interacts with CFH and facilitates CFI-mediated C3b cleavage to yield iC3b. Coprecipitation studies showed specific CFH and C3b binding to thrombomodulin (Fig. 3B and 3C).

After immobilizing cell-membrane preparations of HEK293 cells expressing wild-type thrombomodulin or the thrombomodulin variants associated with atypical hemolytic–uremic syndrome, we measured the binding of biotinylated CFH or C3b with the use of an enzyme-linked immunosorbent assay. Surprisingly, the binding of CFH and C3b to all the thrombomodulin variants, except D486Y, was significantly increased, as compared with the binding to wild-type thrombomodulin (Fig. 3D).


We next tested whether the enhanced binding to the thrombomodulin variants was associated with alterations in the functional relationship of these proteins. The activity of thrombomodulin in complement regulation in solution was tested by incubating recombinant thrombomodulin with combinations of C3b, CFI, and either CFH or C4bBP (CFI cofactors) (Fig. 4). Thrombomodulin enhanced CFI-mediated inactivation of C3b in a dose-dependent manner in the presence of either CFH or C4bBP (Fig. 4B and 4C). As expected, there was no C3b cleavage by CFI in the absence of a cofactor (data not shown).

Figure 4
Inactivation of Complement Factor C3b by Complement Factor I, as Facilitated by Thrombomodulin

The effect of thrombomodulin mutations associated with the atypical hemolytic–uremic syndrome on the capacity of thrombomodulin to enhance CFI-mediated inactivation of C3b was evaluated on the surface of a series of HEK293 cells that expressed each of the variants in equal amounts. In the presence of CFH, thrombomodulin variants were less effective than wild-type thrombomodulin in enhancing CFI-mediated conversion of C3b to iC3b (Fig. 5A). Diminished CFI-mediated inactivation of C3b in the presence of C4bBP was apparent only with the P501L mutation (Fig. 5B), a finding that is consistent with the predominance of CFH as a CFI cofactor.

Figure 5
Effect of Thrombomodulin Mutations Associated with Atypical Hemolytic–Uremic Syndrome on Inactivation of Complement Factor C3b and on Activation of Plasma Procarboxypeptidase B (TAFI)


Thrombomodulin also supports thrombin-mediated conversion of TAFI to activated TAFI (TAFIa), low levels of which have been associated with the hemolytic–uremic syndrome.36 We tested the effect of the thrombomodulin variants on thrombin-mediated generation of TAFIa, as assessed by the appearance of a 36-kD fragment37 (Fig. 5C). We found that generation of TAFIa was significantly reduced with all the variants associated with atypical hemolytic–uremic syndrome, as compared with wild-type thrombomodulin.


We identified six missense mutations in the gene encoding thrombomodulin in seven unrelated patients with atypical hemolytic–uremic syndrome, accounting for 4.6% of the 152 cases. We also found that the resultant thrombomodulin variants did not protect cultured cells against complement activation. SNPs in the coding region of the THBD gene are rare,3840 and only eight missense changes are reported in the dbSNP database ( One insertion frameshift mutation has been described in a kindred with myocardial infarction,41 whereas no homozygous mutations have been reported. All the THBD gene mutations that we identified were heterozygous.

In one carrier of a mutation, the disease was first manifested when the person was 15 years of age, and in four carriers, the hemolytic–uremic syndrome has not developed. These data suggest that mutation of a single THBD allele is not sufficient by itself to cause atypical hemolytic–uremic syndrome. Rather, additional factors — environmental, genetic, or epigenetic — are probably required. Indeed, in two patients, episodes of the hemolytic–uremic syndrome were triggered by viruslike illnesses. This finding is relevant to thrombomodulin, since the expression of thrombomodulin is down-regulated during inflammation and infection.4245 Overall, the findings are similar to those observed with mutations in CFH, CFI, C3, C4bBP, and CFB in the hemolytic–uremic syndrome, which are often missense mutations (in the case of CFH, CFI and C3)17,27 and are usually heterozygous4,913,1517 and associated with disease after an infection.27

Thrombomodulin is a 557-amino-acid endothelial glycoprotein that is anchored to the cell by a short cytoplasmic tail and a single transmembrane domain.46 A series of six epidermal growth-factor–like repeats are required for thrombin-mediated generation of activated protein C, which has anticoagulant and cytoprotective properties, and the generation of activated TAFI, which has C3a-degrading and C5a-degrading properties.23,47,48 Farthest from the transmembrane domain is the lectinlike domain, which confers resistance to proinflammatory stimuli, including endotoxin and ischemia–reperfusion.25,49 It is notable that three of the missense mutations that we found to be associated with atypical hemolytic–uremic syndrome are in the lectinlike domain of thrombomodulin.

The A43T mutation is a rare variant that has been associated with venous thrombosis,50 atherosclerosis, and myocardial infarction.51 A computer-generated model of the lectinlike domain of thrombomodulin predicts that A43 is positioned on the surface of the molecule, where it could potentially bind to proteins in the circulation.52 This observation is in line with our findings that thrombomodulin variants associated with the atypical hemolytic–uremic syndrome that involve the lectinlike domain alter CFH and C3b binding and, in turn, the regulation of complement activation.

The other three mutations in sporadic cases of atypical hemolytic–uremic syndrome — D486Y, P495S, and P501L — reside in the serine–threonine-rich region of thrombomodulin. D486Y and P501L have been reported rarely in patients with venous thrombosis.53 These mutations are near the consensus sequence for attachment of chondroitin sulfate at serine 49254; in vitro, P495S and P501L moderately reduce expression of thrombomodulin on the cell surface, and P495S decreases the affinity of thrombomodulin for thrombin.55 All three of these variants exhibited defects in suppressing activation of the alternative complement pathway through CFI-mediated C3b inactivation in vitro, implicating them in the pathogenesis of atypical hemolytic–uremic syndrome. The additional impairment in TAFIa generation probably aggravates the disease.36 Thrombomodulin has a binding site for C3b and CFH, thereby accelerating CFI-mediated inactivation of C3b. Beyond these activities, which negatively regulate the alternative pathway, thrombomodulin plays a wider role in suppressing complement-mediated cell injury. Thrombomodulin interferes with thrombin-mediated activation of C556 and is necessary for thrombin-mediated generation of TAFIa. Thus, in addition to its role in coagulation, thrombomodulin interacts with several complement pathways (Fig. 1).

Despite advances in delineating the pathogenesis of atypical hemolytic–uremic syndrome, effective therapies are lacking, and in most patients, end-stage renal failure requiring dialysis develops. Since thrombomodulin simultaneously suppresses the complement and coagulation systems, its administration may have therapeutic value for some patients with the atypical hemolytic–uremic syndrome. The efficacy and safety of recombinant thrombomodulin for disseminated intravascular coagulation have been shown in a phase 3 clinical trial.57

In conclusion, we have shown that thrombomodulin is a negative regulator of the complement system and that mutant variants of thrombomodulin may contribute to the development of atypical hemolytic–uremic syndrome.

Supplementary Material

Supplementary Material


Supported by a grant from the National Institutes of Health (DK71221), Istituto Superiore della Sanità (Project no. 526D/9), Fondazione ART Per La Ricerca Sui Trapianti (Milan) (all to Drs. Noris and Remuzzi), Fonds voor Wetenschappelijk Onderzoek (FWO #G.0675.08, to Dr. Conway), and Fondation Leducq in Paris (to Drs. C.T. Esmon and N.L. Esmon).

We thank the clinicians and patients for their membership in and support of the International Registry of Recurrent and Familial HUS/TTP (for a full list of the coordinators and investigators of the registry, see the Supplementary Appendix), with particular thanks to Dr. Kenneth Lieberman, Mrs. Rachel Dominguez, Dr. Avi Katz, Prof. Clifford E. Kashtan, Prof. Francesco Emma, and Dr. Rosa Bellantuono; Drs. Elena Bresin, Chiara Mossali, and Gaia Pianetti (Mario Negri Institute for Pharmacological Research, Clinical Research Center for Rare Diseases, Ranica, Bergamo, Italy) for collecting clinical data and biologic samples for sequencing of complement genes; and the personnel of the VIB Genetic Service Facility for generating THBD sequences.


Drs. C.T. Esmon and N.L. Esmon report holding licenses and patents related to protein C and activated protein C that are unrelated to this article; and Dr. Conway, holding a patent for the use of the lectinlike domain of thrombomodulin as an antiinflammatory agent. No other potential conflict of interest relevant to this article was reported.


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