The antibody response to HCV
in vivo is directed against several viral proteins [
14]. However, nAbs that block HCV entry are specifically directed toward the viral envelope, particularly envelope glycoprotein E2. Although the crystal structure of E1-E2 has not been solved, recent findings based on molecular and biochemical analyses provide key information on the structural organization and antigenic determinants of E1 and E2 envelope glycoproteins [
15]. The envelope glycoproteins E1 and E2 are type I transmembrane proteins with an N-terminal ectodomain and a short C-terminal transmembrane domain (TMD). The N-terminal ectodomains of E1 and E2 are heavily glycosylated and the glycans are thought to play major roles in E1-E2 folding, HCV entry, and neutralization [
16]. Virion-associated E1 and E2 envelope glycoproteins form large covalent complexes stabilized by disulfide bridges [
17], forming a functional glycoprotein that mediates viral entry into host cells [
17].
Initial HCV attachment to the cell surface is likely facilitated by interaction with attachment factors like glycosaminoglycans [
18,
19] and probably low-density lipoprotein (LDL) receptor [
20], though this internalization pathway might not lead to sustained viral infection [
21,
22]. Upon initial attachment, at least six host entry factors are important for particle internalization. These include scavenger receptor class B type 1 (SR-BI), CD81, the tight junction proteins claudin 1 (CLDN1) and occludin (OCLN) [
23], the receptor tyrosine kinases [
24] and the Niemann-Pick C1-like 1 cholesterol absorption receptor [
25]. Functional analysis and neutralization experiments using sera from chronically HCV infected patients have demonstrated that host neutralizing responses target viral entry at a step after initial HCV binding; most likely by interrupting HCV E2-CD81 or HCV E2-SR-BI interactions, or by inhibiting membrane fusion [
26]. Indeed, several E2 domains have been shown to play pivotal roles in viral entry and neutralization. Two regions in the E2 envelope glycoprotein have increased genetic variability within a quasispecies and among genotypes and have therefore been identified as hypervariable regions (HVR). The first 27 amino acids of E2 compose the first HVR (HVR1), which plays an important role in viral fitness, likely due to the involvement of SR-BI-mediated entry [
27], assembly, and release of virus particles [
28], as well as the HCV membrane fusion process [
28]. Although HVR1 is a prime target for neutralizing antibodies, the antibodies that target HVR1 exhibit poor cross-neutralization potency across different HCV isolates due to the region’s high variability [
29]. Both deletion of HVR1 and insertion of single mutations in this region significantly increase sensitivity of HCV variants for neutralization by monoclonal antibodies (mAbs) or patient-derived sera [
17,
30]. Antibodies that demonstrate broadly neutralizing activity tend to be directed against conserved and conformational epitopes within E2 and most often inhibit the interaction between CD81 and E2 [
31,
32,
33,
34,
35,
36,
37,
38,
39,
40]. The region located immediately downstream of HVR1 has been shown to contain a potent and highly conserved epitope [
41]. This epitope is defined by the mouse mAb AP33 and the rat mAb 3/11. These antibodies inhibit interactions between E2 and either CD81 [
34] or heparan sulfate [
42]. Recently, conformational and widely conserved epitopes were identified in E1 and E2 [
38,
43,
44,
45]. The human mAb AR3, which defines one of these epitopes (aa 396–424; 436–447; 523–540), neutralizes genetically diverse HCV isolates and protects against challenge of heterologous HCV quasispecies in a human liver–chimeric mouse model [
38]. Similar antibodies recognizing conformational epitopes, in this case defined by the mouse mAb D32.10 (aa 297–306; 480–494 and 613–621), were observed to circulate at high levels in the sera of patients with resolved HCV infection [
44,
45].
Recently, epitopes have been identified in the E2 protein at residues 412–426 (epitope I) and 434–446 (epitope II). Interestingly, antibodies that bind one of these epitopes may be interfering antibodies, in that the binding of a non-neutralizing antibody to epitope II disrupts virus neutralization mediated by an antibody binding at epitope I [
46,
47]. However, discrepant data were reported recently by Tarr
et al., which indicate that human antibodies that target the aa 434–446 region do not inhibit neutralization but instead are capable of neutralizing HCV pseudoparticles (HCVpp) and cell-culture derived HCV (HCVcc) entry [
48].