The balance between absorbed and photochemically converted energy for metabolism is critical in photosynthetic organisms [
1]. The absorption of excessive energy with respect to energy used in photosynthesis may induce photoinhibition [
2]. Photoinhibition is a consequence of either reversible down-regulation of PSII through the dissipation of excess absorbed energy or the irreversible inactivation of PSII and damage to the D1 reaction center protein [
2,
3]. However, D1 is also degraded under non-photoinhibitory conditions and it is continuously replaced by newly synthesized protein. When plants are exposed to excessive high light conditions or when new protein synthesis is impaired by unfavorable environmental stress conditions, the inactivation rate exceeds the capacity for its repair. Under this condition, the content of functional D1 protein is depleted, resulting in photodamage of PSII [
4,
5]. The actual extent of photoinhibition “
in vivo” depends on the balance between inactivation of D1 and the repair process, which involves insertion of new D1 molecules into the thylakoid and their incorporation into the PSII complex [
6]. Light is a requirement for PSII function restoration. Recovery from photoinhibition does not occur in darkness, mainly due to impaired thylakoid protein synthesis [
7].
In addition, recovery from photoinhibition is strongly temperature dependent [
8-
10]. Under low temperature, the inhibition of D1 repair process has been postulated as the principal mechanism of photoinhibition, because “
de novo” D1 synthesis is impaired [
11]. Cold acclimation results in an increase in photosynthesis capacity at suboptimal temperature [
2]. Previous studies have demonstrated that increased tolerance to photoinhibition in cereals is a result of growth and development under conditions that induce a high PSII excitation pressure, which reflects the redox poise of the intersystem electron transport chain [
12-
14]. This is supported by earlier studies that have reported correlations between tolerance to photoinhibition and the redox state of Q
A, the first stable quinone electron acceptor of PSII [
15,
16]. Recovery in the photosynthesis capacity is closely related with the activation of electron sink process, which can induce a higher relative oxidized state of Q
A, reducing ROS (reactive oxygen species) induction probability [
17,
18].
Thermal dissipation of excess absorbed energy, at antenna level, is a fast and efficient protective strategy which prevents over-reduction of Q
A[
19]. Thermal dissipation is measured through non-photochemical quenching (NPQ) [
20]. NPQ has been shown to be composed of at least two components with different relaxing time scales. The fast relaxing component NPQ
f, also called qE, is rapidly relaxed after dark. It requires thylakoid lumen acidification, zeaxanthin synthesis in the xanthophylls cycle and protonation PsbS protein [
21-
23]. Under prolonged light stress, qE is replaced by a sustained, slowly reversible component NPQ
s or photoinhibitory component (qI). This component is less characterized and it has been linked to retention of zeaxanthin under dark and photodamage of D1 [
19]. The relaxation of NPQ and the epoxidation of zeaxanthin are important to the first phase of the recovery process [
3,
24,
25].
Colobanthus quitensis (Kunth) Bartl. Caryophyllaceae is one of only two angiosperm species to have naturally overcome the geographical and environmental impediments for colonization of the Antarctic [
26].
C. quitensis extends from the Maritime Antarctic and along the Andes Mountains to Ecuador, with one site in Mexico [
27]. In the Antarctic,
C. quitensis grows as a perennial herb which develops its vegetative and reproductive cycle typically between December and March, with frequent average daily air temperatures usually between 0°C and 6°C, and the minima are between −2°C and −4°C [
28,
29]. The photoperiod reaches about 21/3 light/dark hours in December in the Maritime Antarctic, with a vast majority of cloudy days (usually 300 to 600

μmol photons m
-2
s
-1). Clear days with much higher photosynthetic photon flux density (PPFD) reach about 20% of summer days [
26,
30,
31].
C. quitensis usually grows above 2500

m

a.s.l. in the Andes Mountains [
32]. In the Andes of Central Chile, its life cycle is developed from October to April (during the snow-free period) with shorter photoperiods than in the Antarctic. This ecotype grows under wider diurnal temperature oscillations (usually between 0-22°C) and frequently exposed to high PPFD at noon (about 2000

μmol photons m
-2
s
-1) [
33,
34].
It has been recently proposed that differences in morphological and leaf attributes due to acclimation to each particular environment rely on different photoprotective mechanisms [
35]. Molecular studies of the ITS (Internal Transcriber Spacers) of both populations of
C. quitensis demonstrated high ITS similarity among both accessions. Based on morphological and physiological differentiation under common garden experiments, they are now considered ecotypes [
36]. Upon 21

days at 4°C, the Antarctic ecotype exhibited higher cold resistance capacity than the Andean one, reaching a LT
50 (lethal temperature at which 50% of plants died) 4.5°C lower than the Andean ecotype [
36]. Previous studies have reported that both ecotypes have similar optimal temperature for photosynthesis ranging from 17 to 24°C depending on growing conditions [
30,
37] However, low temperature exposure (cold acclimation) improves the Antarctic ecotype responses to photoinhibitory conditions, such as a combination of high light intensity and low temperature [
38].
Most of the above studies on C. quitensis have considered short term exposure to photoinhibitory conditions. However, the extent of damage, the recovery phase, and how low temperature and dark may limit these processes have not been studied. Therefore, the main objective of this work is to understand how cold acclimation affects the extent of photoinhibitory damage and recovery in two ecotypes of C. quitensis. We hypothesized that cold acclimation increases resistance to low-temperature-induced photoinhibition by limiting photodamage and/or promoting recovery under cold, especially in the cold hardiest ecotype.