Despite advances in our understanding of the mechanisms of leukaemogenesis, AML still remains a disease with poor outcome, especially because of disease relapse. This is due to chemoresistant cells surviving the initial exposure to cancer chemotherapy. The characterisation of agents that specifically target relapse-causing cells within their protective niche microenvironment is essential to achieve complete eradication of minimal residual disease cells in AML. We have previously reported that GO targets CD34
+CD38
- AML subpopulation enriched for stem and progenitor cells
[
11]. Moreover the recent finding that the addition of GO to standard induction chemotherapy significantly increases disease free survival and reduces relapse risk in two major multi-centre trials
[
9,
10] suggests an
in vivo effect for GO in targeting cells contributing to minimal residual disease. The other drug in the combination we have studied is tipifarnib, which is clinically available for AML treatment and efficacy of which has been established
[
19,
36]. However, no previous study has attempted to combine these two chemotherapeutic agents. Using 34 primary AML samples, we showed that the combination of GO and Tipifarnib is successful at not only targeting the bulk cells but even more so the CD34
+CD38
- cell fraction under protective “niche-like” conditions (Figure
). Whilst the CD34
+CD38
- leukaemia stem and progenitor cell-enriched phenotype is not the only cell subset to initiate leukaemia in transplantation models, this subset is quiescent, chemoresistant and its presence predicts for poor outcome in AML
[
4-
6].
We have demonstrated a DNA damage response to GO alone and to the tipifarnib

+

GO combination. The DNA damage response indicator γH2A.X (Figure
) and chk2-phosphothreonine68 (Figure
) were elevated in CD34
+CD38
- cells as well as in bulk cells. Leukaemic CD34
+CD38
- cells tend to be dormant
[
4,
30], and despite its canonical role as a checkpoint kinase, chk2 is known to respond to damage in dormant cells
[
37]. It must be borne in mind that the damage response can favour either repair or apoptosis. Thus, whereas CD34
+CD38
-Lin-cord blood cells have a delayed double strand break response compared to CD34
+CD38
+ progenitors
[
38], chk2 knockdown was found to impair, rather than enhance, apoptosis in stem cells
[
39]. This is of particular interest because Chk2 inhibitors have been developed for the express purpose of sensitising cancer cells to chemotherapy drugs, but in contrast to chk1 inhibitors, these do not have proven efficacy, and in some situations have been found to inhibit rather than enhance apoptotic pathways
[
40]. The data from Dick and colleagues suggest that apoptosis is favoured by (largely dormant) haemopoietic stem cells with activated chk2. Our data suggest that the same may be true of leukaemic cells, and moreover, by including GO in a combination which induces DNA damage, the CD33
+CD34
+CD38
- cells over-expressed in leukaemic
[
41,
42], but not in normal, adult bone marrow can be targeted.
To specifically examine whether the DNA damage response is enhanced or impaired in dormant CD34
+CD38
- cells, we studied mTOR-inhibited KG-1a cells treated with daunorubicin, and found that these incur a smaller double strand break response than proliferating cells during a short pulse of drug, but are almost totally unable to repair the damage, such that, by two hours post-treatment, they have a higher burden of γH2A.X foci than proliferating cells. Hence, our data confirm that a DNA damage response can be induced in dormant CD34
+CD38
- leukaemia cells. However, in the case of primary cells treated
in vitro with GO and tipifarnib, another potential scenario is predicated on the fact that leukaemic CD34
+CD38
- cells, driven by autocrine and paracrine cytokines
[
33], frequently re-enter the cell cycle. Thus we cannot conclude definitively that the observed damage responses are occurring in truly quiescent cells.
GO alone induced high chk2 phosphorylation in primary cell culture in bulk cells and in the CD34
+CD38
- and CD34
+CD38
+ subsets, consistent with a previous finding
[
43]. In contrast, tipifarnib did not appear to induce a double strand break response as a single agent. However tipifarnib sensitivity is associated with deficiency of the short patch single strand break repair molecule aprataxin
[
18,
44] and tipifarnib has been reported to induce DNA damage via reactive oxygen species
[
45]. Of interest here is that both calicheamicin and reactive oxygen species produce 3’phosphoglyolate (3’PG) blocking groups in DNA, which, if not processed efficiently, will result in strand breaks
[
46]. The combination of a 3’PG-bistrand DNA damage inducer and a reactive oxygen species inducer may result in complex locally damaged sites which in turn may contribute to the large increase in the double strand break response seen with the drug combination. Tipifarnib has many potential molecular targets in AML cells
[
47] and we acknowledge that any one of these may contribute to the mechanism of its activity and interaction with GO. However, the importance of the DDR in the interaction emerged strongly from our initial phosphokinome profiling.
Sensitivity to GO

+

tipifarnib
in vitro varied from 0% to 100% in our cohort. We reported strong correlations between the toxicity induced by the combination and the toxicities of the individual drugs. The lack of relationship between CD33 expression levels and GO toxicity was unsurprising, given that this has already been explored extensively, with evidence for
[
48] and against
[
49,
50] the expected association. Jedema and colleagues have previously noted that the failure of excess free CD33 antibody to block GO-mediated toxicity in primary AML blasts is concentration-dependent, and occurs at concentrations greater than 1

ng/ml (we used 10

ng/ml in the current study)
[
50]. These authors found evidence for antibody uptake by endocytosis, and their work was predicated on the finding in a clinical study that CD33 expression did not clearly correlate with GO response. Walter and colleagues found that CD33 expression had a statistically significant correlation with outcome in 276 AML patients treated with GO monotherapy, but this effect was small and therefore had minimal predictive value
[
48].
We and others have previously reported a role for Pgp in GO sensitivity
[
11,
34]. In the current study we have shown that a significant association remains when tipifarnib is used together with GO, despite the role of tipifarnib as a Pgp inhibitor. Normal haematopoietic CD34
+CD38
- cells over-express Pgp, but we have shown previously that leukaemic CD34
+CD38
- subsets express Pgp at the same levels as more mature cells in the sample
[
11], so we could not expect Pgp over-expression to account for differences in chemosensitivity between bulk cells and CD34
+CD38
- cells in the same individuals.