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Hematopoietic stem cells (HSCs) possess long-term self-renewal capacity and multipotent differentiative capacity, to maintain the hematopoietic system. Long-term hematopoietic homeostasis requires effective control of genotoxic damage to maintain HSC function and prevent propagation of deleterious mutations. Here we investigate the role of the BH3-only Bcl-2 family member Bid in the response of murine hematopoietic cells to long-term replicative stress induced by hydroxyurea (HU). The PI3-like serine/threonine kinase, ATR, initiates the DNA damage response (DDR) to replicative stress. The pro-apoptotic Bcl-2 family member, Bid, facilitates this response to replicative stress in hematopoietic cells, but the in vivo role of this DDR function of Bid has not been defined. Surprisingly, we demonstrate that long-term HU treatment expands wild-type myeloid progenitor cells (MPCs) and HSC-enriched Lin−Sca1+Kit+ (LSK) cells to maintain bone marrow function as measured by long-term competitive repopulating ability. Bid−/− MPCs demonstrate increased sensitivity to HU and are depleted. Bid−/− LSK cells demonstrate increased mobilization manifest by increased Bromodeoxyuridine (BrdU) incorporation. Bid−/− MPCs and LSK cells are relatively depleted, however, and bone marrow from Bid−/− mice demonstrates decreased long-term competitive repopulating ability in both primary and secondary transplants. We thus describe a survival function of Bid in hematopoiesis in the setting of chronic replicative stress.
Hematopoietic stem cells (HSCs) are the multipotent cells that maintain the entire blood system over the lifespan of an organism.1, 2, 3 HSCs are subject to genotoxic stress through both extrinsic sources such as environmental toxins and radiation, as well as DNA damage arising from essential functions of the cell, such as during DNA replication. The central hematopoietic maintenance role of HSCs requires stringent protection of genomic integrity.
The dynamic nature of the hematopoietic system places it in a vulnerable position with respect to genomic damage during DNA replication.4 Following hematopoietic stress, HSCs are mobilized, and enter the cell cycle to produce the rapidly cycling hematopoietic progenitors that replenish the hematopoietic compartment. Thus, both the HSCs as well as the committed progenitors are vulnerable to replicative stress-induced DNA damage. Indeed, defects in cell cycle checkpoints result in excessive mobilization of HSCs, depleting HSC self-renewal function in bone marrow transplantation.5
Recently, two groups investigated the response of HSCs and committed progenitor cells to DNA damage induced by ionizing radiation (IR) in mouse and human systems, respectively.6, 7 Murine hematopoietic stem and progenitor cells (HSPCs: lin−/c-kit+/Sca-1+/Flk2−) resist IR-induced apoptosis and preferentially utilize error-prone non-homologous end joining for DNA repair.6 Human HSPCs isolated from human cord blood upregulate p53 in response to DNA damage and are removed by apoptosis.7 In both systems, HSCs appear to maintain long-term genomic integrity at the expense of repopulating ability. The impact of chronic replicative stress on bone marrow function has not been evaluated.
A highly regulated signaling program activates cell cycle checkpoints, DNA repair, and apoptosis in response to DNA damage. The PI3-like kinase Ataxia Telangiectasia Mutated (Atm) initiates the DNA damage response (DDR) to double-strand breaks (DSBs) induced by agents such as IR.8 The Ataxia telangiectasia and RAD3 related (Atr) DNA damage kinase mediates the DDR to single-stranded DNA generated during replicative stress. The ribonucleotide reductase inhibitor hydroxyurea (HU) stimulates the Atr-directed DDR by depleting nucleotide pools, resulting in stalled replication forks. Atr is also essential for DNA replication.9, 10, 11 Cells with defects in the Atr pathway show increased sensitivity to DNA-damaging agents causing replicative stress such as HU.12, 13
A number of key factors in the DNA damage/repair pathways have an important role to maintain genomic integrity and bone marrow function. Atr conditional knockout mice demonstrate premature aging defects with significantly decreased LSK populations and thymic progenitors.14 Atm−/− mice demonstrate progressive bone marrow failure due to a depletion of LSK cells, as well as HSC function.15 Mice harboring a hypermorphic mutant allele of p53 display a reduced proliferating HSC population in aging with limited HSC function.16 In addition, mice with deficiencies in DNA repair, including nucleotide excision repair, telomere maintenance, and non-homologous end-joining, have diminished hematopoietic stem cell function with age,17, 18 suggesting that the accumulation of endogenous DNA damage limits stem cell function in a cell autonomous fashion.
Pro-apoptotic Bid is highly expressed in the hematopoietic system and regulates myeloid homeostasis and tumorigenesis.19, 20 Bid is a highly potent activator of intrinsic apoptosis following multiple cellular stresses;21, 22, 23, 24, 25 however, a singular apoptotic function does not account for all of the current data regarding Bid's function. Bid-deficient myeloid progenitor cells (MPCs) display decreased viability in culture.19, 20 Cultured Bid−/− activated T cells and myeloid progenitor cells are hypersensitive to HU but not IR treatment in vitro.26 Bid−/− bone marrow is hypersensitive to intraperitoneal injection of HU but not to IR in vivo,19 consistent with an impaired DDR to replicative stress. Indeed, Bid−/− MPCs and Bid-deficient U2OS cells demonstrate limited Atr function following HU treatment.19 Furthermore, Bid associates with the Atr/Atrip/RPA complex,19 and the association between Atr/Atrip and RPA is significantly diminished in Bid-deficient cells following replicative stress,19 suggesting that Bid has a role to maintain the DNA damage sensor complex. Bid is thus positioned to have a role in the DDR response to replicative stress in the hematopoietic system.
In this study, we investigated the in vivo response of wild type and Bid−/− LSK cells and committed progenitors to replicative stress. Interestingly, in wild-type mice under conditions of repeated replicative stress, the LSK and MPC cell populations are expanded, and the bone marrow function is maintained as demonstrated by the ability to compete with unchallenged bone marrow to adequately repopulate lethally irradiated recipient mice. Thus, LSK and MPC cell populations expand to maintain homeostatic control.
Consistent with a role for Bid in the DDR to replicative stress, Bid−/− hematopoietic progenitor cells demonstrate increased cell death and increased DNA damage. This increased progenitor cell death leads to increased Bid−/− LSK cell proliferation during replicative stress-induced homeostatic recovery. Following long-term HU treatment, the HSC-enriched LSK and myeloid progenitor cell populations are significantly diminished in Bid−/− mice and γH2A.X-positive cells are significantly increased in Bid−/− bone marrow. In addition, long-term HU-stressed Bid−/− bone marrow displays defective primary and secondary repopulating ability, consistent with diminished stem cell function. Our studies are most consistent with Bid facilitating normal Atr function to maintain replication fork and genomic integrity in the cycling progenitor cells following replicative stress. Proper control of replicative-stress-induced progenitor cell death thus prevents excessive mobilization of HSCs and depletion of bone marrow function.
Over the lifetime of an organism, replicative stress damages DNA of bone marrow progenitor cells. To investigate the role of Bid on bone marrow function in the setting of chronic replicative stress, we treated Bid+/+ and Bid−/− mice with HU to deplete nucleotide pools, thus selectively depleting the replicating MPCs. HU treatment has been demonstrated to increase cycling of the HSC-enriched LSK population in vivo,27 presumably by mobilization of HSCs to replenish depleted progenitor cell populations. Bid−/− mice were chosen as a model to investigate the physiological function of ATR-mediated DDR in the hematopoietic system.
Bid+/+ and Bid−/− mice were treated with HU by intraperitoneal injection for 3 consecutive days and the regulation of hematopoiesis was studied. LSK (Lin−Sca1+cKit+) and MPC (Lin−Scal−cKit+) cells were evaluated by immunostaining and flow cytometry.28 The lineage (Lin) cocktail consisted of: CD3, B220, Ter119, Gr-1. Lin−, c-kit+, Sca-1− cells were stained for CD34 and FcγII/III to delineate subpopulations of progenitor cells. LSK cells were defined as Lin−, c-kithigh, Sca-1high. Megakaryocyte-erythroid progenitors (MEPs) were defined as Lin−c-kithighSca-1lowCD34−FcγII/IIIlo, granulocyte–macrophage progenitors (GMPs) were defined as Lin−c-kithighSca-1lowCD34+FcγII/IIIhigh, and common myeloid progenitors (CMPs) were defined as Lin−c-kithighSca-1lowCD34+FcγII/IIIlo. Following HU treatment, the MPC populations (CMP, GMP, MEP) were significantly diminished in Bid−/− bone marrow (Figures 1a and b), which is consistent with our previous finding that cultured Bid−/− MPCs are hypersensitive to HU.26 Interestingly, no obvious alteration was observed in the HSC-enriched LSK population (Figure 1c).
To investigate Bid's role in the apoptotic response of MPCs and LSK cells to replicative stress, Bid+/+ and Bid−/− mice were injected with 100mg/kg/day HU intraperitoneally daily for 3 days, and the bone marrow was analyzed by flow cytometry on day 4. Using this treatment schedule, Bid−/− bone marrow demonstrated significantly increased Annexin V-positive MPC and LSK cells following HU treatment (Figures 2a and b) relative to Bid+/+ MPC and LSK cells.
To investigate the proliferation of MPCs and LSKs following HU, Bid+/+ and Bid−/− mice were treated with HU as above. Mice were injected with BrdU 23h after the last HU treatment. Following HU, both LSK and MPC populations demonstrate significantly increased BrdU incorporation compared with untreated mice (Figures 2c and d), which is consistent with mobilization of bone marrow progenitor cells to replenish cells depleted by HU.27 Interestingly, HU-stressed LSK but not MPC populations in Bid−/− bone marrow demonstrated significantly increased BrdU incorporation (Figures 2c and d). Augmented loss of MPCs following HU in Bid−/− mice thus increases proliferation of LSK cells.
To further evaluate colony-forming ability of Bid−/− bone marrow following HU, bone marrow from HU-stressed Bid+/+ and Bid−/− mice was harvested and cultured in methylcellulose supplemented with interleukin 3 (IL3), interleukin 6 (IL6), stem cell factor (SCF), and erythropoietin (EPO). These conditions support differentiation of hematopoietic cells through the myeloid lineage. Colony morphology reflects the cell types in the colony, and thus reflects the differentiative capacity of the cell of origin.28, 29 GEMM colonies (colony-forming unit of granulocyte/erythrocyte/macrophage/megakaryocyte) are formed from HSCs and CMP cells; GM colonies (colony-forming unit of granulocyte/macrophage) are formed from granulocyte–macrophage progenitor (GMP) cells; G and M colonies are generated from granulocyte and macrophage, respectively.1 Strikingly, huge GEMM colonies were observed in Bid−/− cultures on day 4 after the bone marrow was plated (Figures 2e and f), consistent with the increased proliferation noted in Bid−/− LSK cells and MPCs. In addition, immature colonies (GEMM and GM colonies) but not mature colonies (G and M colonies) were significantly increased in Bid−/− methylcellulose cultures (Figures 2g and h).
To evaluate the self-renewal/proliferative capacity of HU-stressed bone marrow, methylcellulose cultures were serially replated at 7-day intervals. Interestingly, Bid−/− but not Bid+/+ bone marrow displayed a prolonged colony forming ability (Figures 3a, ,bb and ). Of note, the colony numbers reflect the numbers of progenitor cells that persist, and are therefore a measure of both cell viability as well as differentiation status. The colony numbers demonstrate an initial decline followed by an increase upon serial replating. This ‘wave effect' is highly reproducible and is commonly observed in serial replating studies.30, 31 Cytospin analysis of bone marrow cells after the third methylcellulose plating demonstrated increased progenitor cells in Bid−/− cultures (Figure 4a). The black arrow denotes a neutrophil, the terminally differentiated myeloid cell type. The yellow arrow denotes a myelocyte, an immature myeloid cell type. Unstressed Bid−/− bone marrow demonstrates increased colonies relative to Bid+/+ bone marrow, most notable in the third plating, but ultimately it is exhausted after the fourth plate (Figure 3c). These results demonstrate that Bid−/− immature HSC/MPC populations persist in methylcellulose cultures, suggesting that they may possess an abnormal proliferative potential and/or decreased apoptosis ex vivo following HU stress.
Bid is also a substrate of Atm, the DNA damage kinase directing the DDR to IR. Notably, Atm−/− bone marrow HSC and progenitor cells are more sensitive to IR. This difference, while apparent after 1Gy IR, increases after 2Gy and increases again after 4Gy.6 To determine if the increased replating capacity of Bid−/− bone marrow was specific to treatment with HU, Bid+/+ and Bid−/− mice were irradiated with low dose IR (2Gy), chosen for a similar decrease in overall bone marrow cellularity in Bid+/+ mice as observed with HU.19 Bone marrow from 2Gy IR-stressed Bid+/+ and Bid−/− mice was harvested and cultured in methylcellulose. Both Bid+/+ and Bid−/− bone marrow demonstrate modestly increased replating ability following 2Gy relative to unstressed bone marrow. Distinct from HU-stress, IR-stressed Bid−/− and Bid+/+ bone marrow showed similar colony formation ability in replating and similar GEMM colony size in the first culture (Figures 3d and e). We further evaluated the effect of 4Gy IR on replating capacity of Bid+/+ and Bid−/− bone marrow. Bid+/+ and Bid−/− mice were irradiated with 4Gy IR. At this dose, we observed no difference in methylcellulose colony formation between Bid+/+ and Bid−/− bone marrow with no GEMM colonies noted in cultures from either genotype (data not shown). Furthermore, no colonies were obtained on the second replating. Thus, the phenotype in IR-stressed Bid−/− bone marrow differs from that observed following long-term replicative stress, consistent with our previous finding of a prominent role for Bid in the Atr-directed DDR.19
We have previously demonstrated that Bid−/− cells display limited Atr function and increased sensitivity to replicative stress.19, 26 Furthermore, bone marrow of Bid−/− mice displays increased sensitivity to intraperitoneal injection of HU but not to IR,19 and Bid−/− but not Bid+/+ MPCs and LSK cells demonstrate increased Annexin V+ cells following HU (Figures 2a and b). In addition, Bid−/− but not Bid+/+ LSK cells demonstrate increased BrdU incorporation following HU (Figures 2c and d). Although we cannot exclude a contribution of protection from apoptosis due to loss of Bid in this ex vivo culture system, a rapid proliferation rate in addition to protection from apoptosis is necessary to account for the observed size of the colonies, arising from a single cell. Thus, we favor a model in which the formation of large GEMM colonies in Bid−/− methylcellulose cultures is predominantly due to increased proliferation of MPCs and LSK cells.
Enforced mobilization of HSCs from quiescence to a cycling state depletes stem cell self-renewal function.3 To determine whether long-term HU treatment results in the depletion of bone marrow function in Bid−/− mice, Bid+/+ and Bid−/− mice were treated with HU by intraperitoneal injection for 3 days, and allowed to recover for 7 days. This regimen was repeated for 6 months (see Materials and methods for details).27
Both Bid+/+ and Bid−/− mice survived 6 months of HU treatment, although a gradual loss of body weight (Supplementary Figure S1a) was observed in Bid−/− mice. After 6 months, MPC and LSK cell populations were increased relative to untreated mice for both Bid+/+ and Bid−/− mice (Figures 5a–c). This expansion of LSK and MPC cell populations is also noted in unstressed aged mice, and may reflect compensation for decreased bone marrow function.17, 18 Following long-term replicative stress induced by 6 months of HU treatment, Bid−/− bone marrow demonstrates a relative decrease in both MPC (specifically GMP) and LSK cell populations compared with Bid+/+ bone marrow (Figures 5a–d). This relative depletion of LSK and progenitor cells is consistent with an inability of Bid−/− bone marrow progenitor cells to maintain homeostasis in conditions of long-term replicative stress.
To determine the effect of long-term HU on bone marrow colony forming ability, bone marrow was harvested from Bid+/+ and Bid−/− mice treated for 6 months with HU as above, and cultured in methylcellulose. Similar GEMM colony number (Figure 6a) and size (not shown) were observed in Bid−/− and Bid+/+ cultures, suggesting that the augmented HU-induced Bid−/− LSK mobilization is attenuated following long-term HU treatment. In addition, similar colony formation ability was observed between Bid+/+ and Bid−/− in methylcellulose replating (Figure 6b). The increased sensitivity of Bid−/− bone marrow to HU, while still evident, no longer reaches statistical significance after 6 months of HU treatment (Supplementary Figure S1b).
Replicative stress induces genomic instability and DNA damage at the cellular level.10 γH2A.X is phosphorylated following DNA damage (Supplementary Figure S2). DNA damage levels were detected by γH2A.X staining following 6 months of HU treatment. The γH2A.X-positive cells measured by immunofluorescence were significantly increased in Bid−/− bone marrow (Figures 6c and d), suggesting accumulation of DNA damage following long-term HU treatment. To further identify the cell populations harboring γH2A.X-positive cells, Bid+/+ and Bid−/− bone marrow were stained with immunophenotypic surface markers and γH2A.X-positive cells were detected by flow cytometry. Interestingly, γH2A.X-positive cells were significantly increased in Bid−/− MPCs but not the LSK cells (Figures 6e–g), suggesting that the accumulated γH2A.X-positive cells in Bid−/− bone marrow were predominantly progenitor cells. Different DNA repair mechanisms have been reported between HSCs and MPCs following DSBs.6 Our results are consistent with cycling HSCs and MPCs utilizing a different mechanism to repair DNA damage due to replicative stress. Alternatively, HSCs may preferentially differentiate upon accumulation of DNA damage.
HSC mobilization is linked to stem cell functional depletion.5, 32 We asked whether 6 months of HU treatment alters the competitive repopulating ability of Bid+/+ and Bid−/− bone marrow. Lineage-depleted Bid+/+ (CD45.2) and Bid−/− (CD45.2) bone marrow cells were transplanted into lethally irradiated congenic recipient mice (CD45.1) with equal amounts of lineage-depleted competitor bone marrow cells (CD45.1). The reconstitution of the hematopoietic system was detected by the CD45.2/CD45.1 ratio in peripheral blood from the recipient mice over time (Figure 7a). The percentage of CD45.2+ cells in Bid−/− peripheral blood was significantly diminished compared with Bid+/+ peripheral blood, as demonstrated by the decreased CD45.2/CD45.1 ratio in the recipient mice for the Bid−/− but not the Bid+/+ test populations (Figures 7b and c). As a control, no defect in the reconstitution capacity was observed in untreated Bid−/− bone marrow in a competitive reconstitution assay, but rather a slight competitive advantage,20 suggesting that the diminished HSC function is due to long-term HU treatment. Distinct from the HSC exhaustion noted in other mouse models,5, 14 the reconstitution capacity of Bid−/− HSCs is only impaired following long-term HU treatment. Consistent with this thesis, Bid−/− MPCs but not HSCs display increased cell death following HU, suggesting that the increased death of Bid−/− MPCs triggers mobilization of Bid+/+ HSCs.
To more stringently evaluate the regenerative capacity of wild type and Bid−/− bone marrow following 6 months of HU treatment, we performed a secondary transplant. Mice from the primary competitive repopulation experiment were killed at 6 months. In all, 1 × 105 CD45.2+ whole-bone marrow cells were injected with 1 × 105 congenic CD45.1+ competitor cells into lethally irradiated CD45.1+ mice. Of note, the cells were not sorted to obtain purified populations to avoid confounding effects on viability of Bid−/− versus Bid+/+ cells in the low serum, high-pressure conditions of the flow sorting procedure. Peripheral blood was analyzed 2 months following transplant for the percentage of CD45.2+ cells. Bid−/− bone marrow cells demonstrate decreased repopulating ability in secondary transplantation experiments (Figure 7d), further demonstrating that Bid has a role in maintaining bone marrow function following long-term replicative stress.
HSCs are susceptible to genotoxic stress from multiple etiologies. Recently, the response of HSCs and MPCs to IR has been studied in vivo, in mice and humans. Bid has been shown to mediate the Atr-directed response to replicative stress, but the physiological consequence of long-term replicative stress on bone marrow function and Bid's role in this regulation have not been determined. In this study, we use Bid−/− mice to investigate how defects in this BH3-only family member impact hematopoietic function following replicative stress. Our results are most consistent with a survival role for Bid following replicative stress. Bid−/− MPCs display increased sensitivity to replicative stress, resulting in a compensatory increase in cycling LSK cells. The increased cycling of LSK cells in Bid−/− mice leads to exhaustion, resulting in a diminished LSK and MPC populations (Figure 7d).
Atr has important roles in maintenance of genomic integrity in proliferating cells, as well as in normal DNA replication.10 Germ line deletion of Atr results in early embryonic lethality.33 Atr-deficient mice showed defects in tissue homeostasis with aging-related phenotypes and exhaustion of tissue-specific stem and progenitor cells.14, 32, 34 The contribution of Atr's functions in replication versus the DDR to these stem and progenitor cell defects has not been determined. Cells harboring mutated RPA7035 or the Atr binding partner Atrip36 showed a normal cell cycle profile, but impaired DDR. Similarly, Bid−/− cells demonstrated a normal cell cycle profile, but impaired Atr function following replicative stress.19, 26 In this study, 6 months HU-treated Bid−/− mice demonstrate decreased LSK and MPCs relative to Bid+/+ mice. Interestingly, 1-year-aged untreated Bid−/− mice show a similar percentage of LSKs and MPCs as Bid+/+ mice (Supplementary Figure S3).20 These results are consistent with our previous finding that the major function of Bid in the Atr response is DNA damage-induced.19
Bid has been demonstrated to have dual roles in both programmed cell death and the26, 37 DDR. Distinct functional domains mediate the two functions of Bid.26 The apoptotic function of Bid is predominantly mediated by its caspase-cleavage sites21, 22 and BH3 domain,38 while Bid executes its function in the DNA damage signaling pathways by its Atm/Atr phosphorylation sites26, 37 its unique Helix 4 and RPA-interacting domains.19, 39 Bid−/− mice spontaneously develop chronic myelomonocytic leukemia (CMML) and the tumor cells display chromosomal aberrations.20 It is likely that both the apoptotic and DNA damage function of Bid work synergistically to maintain hematopoiesis. As both cell death and DNA damage signaling pathways are important for tissue homeostasis and genomic integrity, it will be interesting to determine which function of Bid directs the tumor suppressor function of Bid in vivo.
HU is a ribonucleotide reductase inhibitor and therefore has the potential to affect cycling cells. The major effects seen are hematopoietic, and this is the indication for usage in the clinic. We did not see any evidence of other HU toxicities, such as GI toxicity in the Bid−/− or Bid+/+ mice during long-term HU treatment, although subclinical GI irritation might contribute to the weight loss. Alternatively, the accumulation of increased genomic damage in Bid−/− mice might lead to premature aging manifest by decreased muscle mass and subcutaneous fat. Importantly, the hematopoietic changes that we report in Bid−/− mice treated with HU are manifest in competitive transplant experiments and thus cannot be attributed to altered nutritional status.
We speculate that the increased DNA damage observed in MPCs over LSK cells is due to the fact that MPCs cycle rapidly, whereas LSK cells are generally more slowly cycling. This is the simplest explanation for the differential effects observed in MPC and LSK cells, and is consistent with the known effects of HU to induce replicative stress in cycling cells, and the known role for Bid in the DDR to replicative stress.
We have previously reported that 50% of Bid−/− mice spontaneously develop CMML in 20 months. Ninety-five percentage of Bid−/− mice are normal at 1 year of age.20 Furthermore, the tumors are characterized by translocations and trisomy, lesions that occur because of chromatid type errors in DNA repair. The development of CMML might result from DNA damage that accumulates after 1 year of age. Alternatively, the tumors may be precipitated by genomic damage that is not evident by gamma H2AX.
In our previous study,20 we noted an increase in clonogenic potential of Bid−/− bone marrow on the first plating in methylcellulose cultures that also included GMCSF and GCSF, growth factors that affect differentiated myeloid cells. Loss of Bid may potentiate the proliferative response of mature myeloid cells to these growth factors, resulting in increased colonies. Indeed, hyper-responsiveness to GCSF is characteristic of the abnormal cells in Juvenile myelomonocytic leukemia a disorder that closely resembles CMML and the phenotype observed in aging Bid−/− mice. Experiments to determine if Bid−/− bone marrow is hyper-responsive to GMCSF and GCSF are in progress in the lab. In the current study, we did not include GMCSF or GCSF, and observe differences in later replatings.
First identified at the t(14;18) of follicular lymphoma, Bcl-2 and its family have been demonstrated to have crucial roles in maintenance of hematopoiesis.40 Besides sensing and transducing various survival or death signals to mitochondria to regulate apoptosis, more and more ‘non-canonical' functions of Bcl-2 family members have been identified.41 We have demonstrated that Bid, a BH3-only Bcl-2 family member regulates the response of LSK cells and early progenitor cells to replicative stress. Investigating the physiological function of these novel properties of Bcl-2 members will deepen our understanding of Bcl-2 family in the hematopoietic system.
For HU treatment, wild type and Bid-deficient C57/BL6 mice (6–8 weeks old) were treated with 100mg/kg/day HU by intraperitoneal injection for 3 consecutive days. Mice were killed and bone marrow was harvested from femurs and tibias 24h after the third injection. For long-term HU treatment, after 3-consecutive-day-HU treatment, mice were released from HU treatment for 7 days and subjected to HU treatment again for 3 consecutive days. This treatment cycle was repeated for 6 months. For IR treatment, wild type and Bid−/− C57/BL6 mice (6–8 weeks old) were irradiated with 2Gy using a 137Cs source. Mice were killed and bone marrow was harvested 24h after irradiation. At least two independent experiments were performed with n=5 in each set (See figure legend for details).
Bone marrow cells were stained with the following antibody in staining buffer (3% FBS in phosphate-buffered saline (PBS)): biotinylated CD3 (BD Biosciences, San Diego, CA, USA), biotinylated B220 (BD Biosciences), biotinylated TER119 (BD Biosciences), biotinylated Gr-1 (BD Biosciences), APC-conjugated anti-c-kit (BD Biosciences), PE-Cy7-conjugated anti-Sca1 (ebiosciences, San Diego, CA, USA), FITC-conjugated anti-CD34 (BD Biosciences), FITC-conjugated anti-BrdU (BD Biosciences), PE-conjugated anti-FcγRII/III (eBioscience), Pacific blue-conjugated streptavidin (Life Technologies, Grand Island, NY, USA), Alexa Fluor 488-conjugated anti-phospho-Histone H2A.X (Ser139) (EMD Millipore, Billerica, MA, USA, #9719), PE-conjugated anti-CD45.1 (BD Biosciences), and FITC-conjugated anti-CD45.2 (BD Biosciences). For lineage staining, cells were stained with biotinylated CD3, biotinylated B220, biotinylated Ter119 and biotinylated Gr-1 first for 20min on ice. Then, cells were stained with Pacific blue-conjugated streptavidin, APC-conjugated anti-c-kit, PE-Cy7-conjugated anti-Sca1, FITC-conjugated anti-CD34 and PE-conjugated anti-FcγRII/III for 20min on ice. Cell population data were obtained by a five-laser BD LSRII (Vanderbilt Flow Cytometry Core, Nashville, TN, USA) and analyzed by Flowjo 8. Compensation parameter setting was performed using BD CompBead (BD Biosciences).
BrdU incorporation analysis was performed according to BrdU Flow Kits (BD Biosciences). Briefly, mice were treated with 100μl 10mg/ml BrdU solution by intraperitoneal injection. Incorporation of BrdU was detected in bone marrow from femurs and tibias 1h post injection. Erythrocytes were lysed in RBC lysis buffer (10mM Tris-HCl, 0.83% NH4Cl, pH 7.3) and bone marrow cells were stained with various surface markers as mentioned in the figure legends. Then, cells were fixed and permeabilized with BD Cytofix (BD Biosciences)/Cytoperm Buffer (BD Biosciences), and incubated with BD Cytoperm Plus Buffer (BD Biosciences) followed by an additional short fixation with BD Cytofix/Cytoperm Buffer (BD Biosciences). The incorporated BrdU was exposed by treatment with 30μg DNase for 1h at 37°C and probed with FITC-conjugated anti-BrdU antibody (eBioscience) for 20min at room temperature. Cell death analysis was performed according to Annexin V-FITC Apoptosis Detection Kit (BioVision, Milpitas, CA, USA). Briefly, bone marrow cells were obtained from femurs and tibias, and erythrocytes were lysed in RBC lysis buffer (10mM Tris-HCl, 0.83% NH4Cl, pH 7.3). Cells were stained with various surface markers as mentioned in the figure legends. Then, cells were stained with Annexin V-FITC in binding buffer (10mM HEPES/NaOH, 150mM NaCl, 5mM KCl, 1mM MgCl2, 2mM CaCl2, pH 7.4) at room temperature for 15min.
Methylcellulose culture was performed as previously described.20 Briefly, bone marrow was harvested from femurs and tibias, and erythrocytes were lysed in RBC lysis buffer. Then, 5 × 104 bone marrow cells were resuspended in Methylcult H4100 (StemCell Technologies, VanCouver, BC, Canada) supplemented with bovine serum albumin (BSA), FBS, Insulin and Transferrin, with the following cytokines: SCF, IL3, IL6, and EPO. Cells were plated in 35-mm dishes and incubated in a humidified atmosphere at 37°C, 5% CO2. Typical colonies were photographed using a Leica DM IRBE inverted wild field microscope (Vanderbilt Cell Imaging Shared Resource). After 6 days, the cultures were washed with PBS, counted, and replated at the same density. The captured image was analyzed by Photoshop CS3 to measure the diameter of the compact center of each GEMM or GM colony.
Bone marrow was harvested from femurs and tibias, and erythrocytes were lysed in RBC lysis buffer. Then, 5–10 × 104 bone marrow cells were centrifuged onto a glass coverslip by cytospin. Then, cells were fixed in 3% paraformaldehyde/2% sucrose and permeabilized by Triton X-100 solution (0.5% Triton X-100, 20mM HEPES pH 7.4, 50mM NaCl, 3mM MgCl2, 300mM sucrose). γH2A.X-positive cells were detected by immunofluorescence using Alexa Fluor 488-conjugated anti-phospho-Histone H2A.X (Ser139) (EMD Millipore, #9719). The cells were examined using a Leica DM IRBE inverted wild field microscope (Vanderbilt Cell Imaging Shared Resource). For γH2A.X flow cytometry analysis, bone marrows were obtained from femurs and tibias, and erythrocytes were lysed in RBC lysis buffer. Bone marrow cells were stained with various surface markers as mentioned in the figure legends. Then, cells were fixed and permeabilized with BD Cytofix/Cytoperm Buffer, and incubated with BD Cytoperm Plus Buffer followed by an additional short fixation with BD Cytofix/Cytoperm Buffer. Then, cells were stained with Alexa Fluor 488-conjugated anti-phospho-Histone H2A.X (Ser139) (EMD Millipore) for 30min at room temperature and γH2A.X-positive cells were detected by flow cytometry.
C57/BL6 mice recipient mice (CD45.1) were lethally irradiated with nine Gy using a 137Cs source. Donor cells were obtained from Bid+/+ (CD45.2) and Bid−/− (CD45.2) mice following 6 months HU treatment. Bone marrows were obtained from femurs and tibias, and erythrocytes were lysed in RBC lysis buffer. Then, cells were stained with lineage markers (CD3, B220, TER119 and Gr-1) for 20min on ice. Lineage+ cells were depleted by Dynabeads Sheep anti-Rat IgG (Life Technologies) and lineage-cells were counted. In all, 1 × 106 lineage-bone marrow cells from either Bid+/+ or Bid−/− C57/BL6 mice (CD45.2) following 6-months HU treatment together with 1 × 106 lineage-bone marrow cells from wild type C57/BL6 mice (CD45.1+) were equally transplanted into 10 lethally irradiated recipients (CD45.1+) by intravenous injection. Hematopoietic reconstitution was detected followed two and four months after the transplant. Peripheral blood from the recipient mice was subjected to Lymphocyte Separation Medium (MP Biomedicals, Solon, OH, USA) and lymphocytes were collected after centrifugation at 3000, r.p.m. for 30min. The lymphocytes were washed once with PBS, stained by anti-PE-CD45.1 and anti-FITC-CD45.2 antibodies, and CD11b, and analyzed by flow cytometry.
Secondary transplants: Mice from the primary competitive repopulation experiment were killed at 6 months. 1 × 105 CD45.2+ whole-bone marrow cells were injected with 1 × 105 congenic CD45.1+ competitor cells into lethally irradiated CD45.1+ mice. Cells were not sorted to avoid confounding effects because of cellular stress induced by the sorting procedure. Cells were transplanted into lethally irradiated congenic CD45.1+ mice, and peripheral blood was analyzed as above.
Student's t-test was used for all statistical analysis (Excel 2002)
We thank Drs Jennifer Pietenpol, Scott Hiebert, Elizabeth Yang, David Cortez, Laurie Lee, Kathy Gould, and Atan Gross for helpful discussions. This work was supported by funds from NIH R01 HL088347, a Gabrelle's Angel Foundation Scholar award, a Kimmel Scholar award, and ACS IRG58-009-47 to SSZ, and support for use of facilities from the Vanderbilt-Ingram Cancer Center (NIH 2P30CA068485). Cell imaging experiments were performed in the VUMC Cell Imaging Shared Resource (NIH grants CA68485, DK20593, DK58404, HD15052, DK59637 and EY08126). Dr Zinkel is funded by the NIH (R01 HL088347), the Kimmel Foundation, and Gabrielle's Angel Foundation. Dr Yang and Ms Aiello were funded by Dr Zinkel through the sources listed above.
The authors declare no conflict of interest.
Supplementary Information accompanies the paper on Cell Death and Differentiation website (http://www.nature.com/cdd)
Edited by P Bouillet