Seven transmembrane (7TM) receptors constitute the largest superfamily of membrane proteins and function as important mediators of extracellular signals to intracellular responses. The chemical diversity of the endogenous ligands is tremendous ranging from small simple chemical entities like photons, ions, and nucleotides, to more complex small ligands like monoamines and peptides, and larger proteins, glycoproteins, and lipids. The 7TM receptors are divided into five classes of which class A or rhodopsin-like receptors is the dominating class [
1]. The receptors are characterized by seven membrane-spanning
α-helices as well as coupling to G proteins; hence, the name is G protein coupled receptors (GPCRs). (In this review we will use the term 7TM receptors instead of GPCRs as these receptors also signal trough non-G protein-dependent pathways, like
β-arrestin-mediated signaling [
2].) Signaling by 7TM receptors through G proteins leads to, for example, either inhibition (G
αi) or activation (G
αs) of adenylyl cyclase and cAMP production, activation of phospholipase C with inositol triphosphate turnover (G
αq), or activation of RhoGEF (G
α12/13) depending on which G protein the receptor is activating [
3]. Furthermore, the G
βγ subunit is also involved in signaling and the 7TM receptors also signal via G protein-independent pathways like MAP-kinase activation-mediated by
β-arrestins [
4].
Despite the structural diversity in the repertoire of the endogenous 7TM receptor agonists, the conformational changes that occur upon receptor activation are believed to be overall identical. Thus, as the last two decades of biochemical and biophysical studies indicate, TM6, and to a minor degree TM7 and TM3, undergo conformational rearrangement during receptor activation [
5,
6]. Centered around the highly conserved proline in the middle of TM6 (position VI:15 or 6.50) TM6 is believed to perform movements that results in space creation thereby permitting binding of intracellular signal transduction molecules like G proteins and
β-arrestins [
7]. (The numbering of amino acids in the helices is provided according to two numbering systems: the generic numbering system suggested by Schwartz [
8], followed by the numbering system of Ballesteros and Weinstein [
9],) Several crystal structures of 7TM receptors have been presented within the last decade initiated by the structure of bovine rhodopsin [
10] followed by the adrenergic receptors [
11–
15], the adenosine receptors [
16–
18], additional rhodopsin variants [
19–
21], muscarinic receptors, [
22,
23] and several others [
24–
26] including the chemokine receptor CXCR4 [
27]. In the recent years, crystal structures of not only inactive, but also active 7TM receptors, have been identified. Thus, in the agonist-bound
β2-adrenergic receptor, a relatively large rearrangement of the lower segments of TM6 is observed, when compared to the corresponding inactive structure [
13–
15]. This structural feature is also observed in the crystal structure of opsin in complex with a G protein peptide fragment upon comparison with dark-state rhodopsin [
21,
28]. The overall arrangement of the seven transmembrane
α-helices delineate the main binding pocket, and most studies in the search of functionally important residues have focused on amino acids facing this main binding pocket (delimited by TM3, TM4, TM5, TM6, and in part TM7). This is with good reason as most small molecule ligands interact with residues in this pocket [
11,
12,
29]. Furthermore, most conserved microswitches of functional importance also face the main binding pocket. This includes ArgIII:26 (3.50), which is part of the conserved DRY-motif in TM3, the rotameric toggle switch TrpVI:13 (6.48), which is part of the CWxP-motif in TMVI, and TyrVII:20 (7.53), which is part the NPxxY-motif in TMVII—all of which play crucial roles during receptor activation [
30,
31]. However, also residues in the region delimited by TM1, TM2, TM3, and TM7 (the so-called minor binding pocket) function as regulatory switches or major ligand anchor points [
32–
34].
The DRY-motif is the most conserved motif among the microswitches mentioned above (Figures and ) [
21,
30] and has been shown to directly interact with the G protein in a recent crystal structure of the
β2-adrenergic receptor in complex with the G
αs-subunit—a crystal that displayed the actual signaling complex and uncovered the importance of both the DRY-motif and the NPxxY-motif in receptor activation [
14,
35]. While the overall interaction between the G protein and the receptor is mainly hydrophobic within the transmembrane core, the ArgIII:26 (3.50) is sandwiched between a Tyr in the G protein and TyrVI:20 (7.53) of the NPxxY-motif, highlighting the importance of concerted action of both motifs [
14,
35].
The positively charged ArgIII:26 (3.50) has been proposed to be involved in other conformational constrains of importance for receptor activation. Thus, an inactivating salt bridge (a so-called ionic lock) has been suggested between the Arg and another conserved residue, the acidic GluVI:-05 (6.30) in intracellular loop 3 (ICL3) [
36]. This ionic lock is broken during receptor activation where TyrVI:20 (7.53) rotates towards the helix bundle as seen in the active crystal structures of both rhodopsin [
21] and the
β2-adrenergic receptor irreversibly bound to an agonist [
37] or stabilized by a nanobody [
13]. However, as the GluVI:-05 (6.30) is only conserved among 25 % of all class A receptors [
14,
35], and not present in any of the chemokine receptors [
38], the molecular interactions involved in conformational constraining of inactive receptor states and the role of ArgIII:26 (3.50) must be different in receptors without GluVI:-05(6.30). Finally, the DRY-motif interacts with ICL2 of the receptor, thereby stabilizing a position of this loop capable of interacting with a hydrophobic pocket on the G protein and directly linking the highly conserved DRY-motif to the receptor/G protein interaction [
14].
Anotherimportant region for receptor activity is the intracellular C-terminal tail of the 7TM receptors as it contains phosphorylation sites and other regulatory recognition motifs necessary for desensitization by G protein-coupled receptor kinases (GRKs),
β-arrestin recruitment and signaling, internalization and receptor recycling, and for other means of signal regulation [
39]. These two receptor motifs will be the focus of the current review, where we will compare the structural and functional properties, degree of conservation, and functional diversity of the two motifs between class A 7TM receptors encoded by viruses and endogenously encoded 7TM receptors. Most of the virus-encoded 7TM receptors belong to the chemokine subfamily [
40] and consequently extra attention will be directed towards the viral molecular piracy within the chemokine system and the endogenous chemokine receptors.