Bacterial denitrification pathways, consisting of four sequential enzymatic steps that reduce nitrate to gaseous nitrogen, have been identified in bacteria living in various environments (reviewed in reference
75). Anaerobic bacteria use denitrification pathways as an alternative means of energy production, with nitrogen oxides functioning as electron acceptors (
75). Recently, denitrification by bacterial pathogens has attracted increasing interest (
51). The nitrate reductase complex NarGHJI was shown to be involved in
Mycobacterium bovis BCG virulence in an animal model (
73) and was implicated in
Pseudomonas aeruginosa biofilm formation and virulence (
65,
66). The
Brucella melitensis denitrification pathway is required for virulence in mice (
6,
23). Denitrification promotes the growth of
Neisseria meningitidis, a strictly aerobic human pathogen, under oxygen-limited conditions (
3,
55). Barth and colleagues (
8) recently showed that, among all
Neisseria strains tested, a nitrate reductase complex could be identified only in
Neisseria mucosa. However, a nitrite reductase (AniA or NirK) and nitric oxide reductase (NorB) were present in all
Neisseria species tested. Interestingly, a nitrous oxide reductase (Nos) is present in some commensal
Neisseria species but absent from the pathogenic species
Neisseria gonorrhoeae and
N. meningitidis. The fumarate and nitrate reductase (FNR), NarQP, and NsrR transcriptional regulators are highly conserved in
Neisseria species. The transcriptional regulator NsrR is conserved in several
M. catarrhalis clinical isolates; however, the ATCC 43617 genome does not encode an FNR protein regulator (
72). Instead, the
M. catarrhalis genome encodes a two-component system NarXL and a homologue of the DnrD protein which lacks the [4Fe-4S] center and belongs to a new subgroup of the FNR regulator family (
72). The nitric oxide reductase NorB is responsible primarily for NO detoxification (
61,
62) in
Neisseria species, and a
cycP gene product also functions in NO detoxification (
3,
62). The
M. catarrhalis ATCC 43617 genome has 18 open reading frames (ORFs) encoding cytochrome
c proteins (
71). Six of the
M. catarrhalis cytochrome
c proteins contain a heme-binding motif (CXXCH) (
15). Four of these heme-binding cytochrome
c proteins have a signal peptide sequence identified with SignalP 3.0 (
http://www.cbs.dtu.dk/services/SignalP/). Only ORF 192 (152 amino acids; also known as Msp22 [
56]) has both a signal peptide sequence and a single CXXCH motif that is located at its C terminus, which are features specific for cytochrome
c′ (
cycP). However, a role for the ORF 192 protein in
M. catarrhalis NO· detoxification has not been established.
It was recently reported that
M. catarrhalis forms biofilms on the mucosal surface of the middle ear in children with chronic otitis media (
24). Studies of
M. catarrhalis gene expression have revealed that the expression of the enzymes comprising the truncated
M. catarrhalis denitrification pathway was highly upregulated in biofilm-grown
M. catarrhalis cells
in vitro (
71). Elevated expression of denitrification genes has been reported in other pathogens, including
N. gonorrhoeae (
17) and
P. aeruginosa (
65), during growth in biofilms
in vitro. M. catarrhalis is known to reduce NO
3− (reviewed in reference
12), although the genes that encode this activity (likely
narGHJI) have not been fully described. An initial study showed that an
M. catarrhalis narGH mutant grows as well in a continuous-flow biofilm system as its wild-type parent (
71). The importance of denitrification for
M. catarrhalis biofilm formation remains to be fully elucidated. Recent studies showed that a low level of NO· can promote biofilm dispersal in
P. aeruginosa (
65) and
N. gonorrhoeae (
18). In contrast, high chemically generated levels of NO· inhibit early-stage biofilm formation but enhance
N. gonorrhoeae growth in established biofilms (
18).
The present study shows that a functional
norB gene is required for
M. catarrhalis to reduce chemically generated NO· (, blue line), as NO· is not utilized by an O35E
norB isogenic mutant (, red, green, and yellow lines). It is not apparent why
M. catarrhalis norB mutant cells express higher levels of AniA (, lane 2) than the wild type (, lane 1), even when cells are grown on BHI agar without the addition of nitrite. The NsrR-repressed aerobic expression of
M. catarrhalis AniA is insensitive to chemically generated NO· (from 50 μM spermine NONOate; half-life, about 39 min at 37°C) in wild-type O35E cells (
72). Although both
norB and
nsrR norB mutants express significantly higher levels of AniA protein (, lanes 2 and 4), they do not reduce nitrite faster (, red and green lines) than the wild type (, blue line). In contrast, an
M. catarrhalis nsrR mutant reduces nitrite more rapidly than the wild type (
72). This is attributable to the accumulation of NO· in the absence of NorB, some of which undergoes auto-oxidation to nitrite (
30), and the inability of the Griess reagent to distinguish NO· and nitrite.
Bacteria employ different mechanisms for NO· detoxification to withstand nitrosative stress. An NsrR-regulated and NO· -inducible flavohemoglobin protein (Hmp) is the major NO· detoxifier in
Salmonella enterica serovar Typhimurium (
7,
22) and
Escherichia coli (
19). The enteric pathogen
S. Typhimurium requires Hmp for virulence in mice expressing inducible NO· synthase (
7). In
E. coli, Hmp is required for resistance to nitrosative stress (
25) and for bacterial survival within macrophages (
63). The
M. catarrhalis ATCC 43617 genome does not contain a gene encoding a Hmp-like protein (
72). Furthermore, a low level of nitrite completely inhibits the growth of an
M. catarrhalis O35E
norB mutant (), strongly suggesting that this bacterium relies on NorB for NO· detoxification. It has not been immediately obvious why nitrite supplementation also completely inhibits the aerobic growth of an
M. catarrhalis nsrR mutant, because this mutant rapidly reduces nitrite to nitrous oxide with little or no detectable steady-state NO· accumulation (
72). To investigate whether an increased flux of NO· is responsible for nitrite-related inhibition of the aerobic growth of an
M. catarrhalis nsrR mutant, we examined bacterial protein
S-nitrosylation profiles.
In an enzyme-independent chemical reaction, NO· can bond covalently with the thiol groups of protein cysteine residues to form
S-nitrosothiols (SNOs), a posttranslational modification of cellular proteins known as
S-nitrosylation (
59,
60).
S-nitrosylation has been implicated in mammalian cell apoptosis (
9,
33–
35,
39,
53). A recent study reported that bacterial proteins involved in NO· detoxification, including NorB of
N. meningitidis and the flavohemoglobins (Hmp) of
S. enterica and
E. coli, prevent host cell SNO formation (
37).
S-nitrosylation of bacterial proteins was determined in wild-type O35E,
norB mutant,
aniA norB mutant, and
nsrR mutant
M. catarrhalis cells as described in Materials and Methods. The source of additional NO· was nitrite that was reduced by the activity of the
M. catarrhalis AniA protein. The O35E
aniA norB mutant does not express AniA (, lane 3) and is unable to reduce nitrite (, yellow line). The O35E
norB mutant and
nsrR mutant strains express significantly higher levels of AniA (, lane 2, and reference
72) than the parental strain, O35E (, lane 1). By Western blot analysis, a band slightly above 22 kDa is present only in the three AniA-expressing O35E strains, and an overall increase in
S-nitrosylation was observed in all AniA-expressing
M. catarrhalis strains in the presence of nitrite (, wt +,
norB +, and
nsrR + lanes). Increased
S-nitrosylation correlated well with levels of AniA expression and was highest in an
nsrR mutant (,
nsrR + lane) and lowest in wild-type O35E (, wt + lane). These observations strongly suggest that NO· is the inhibitory factor responsible for the nitrite-dependent inhibition of the growth of the
norB and
nsrR mutant strains. Although the
nsrR mutant exhibits low measurable steady-state NO· concentrations (
72), the increased flux of NO· produced from nitrite reduction appears to cause nitrosative stress, which could account for growth inhibition by nitrite. The specific protein targets of
S-nitrosylation in
M. catarrhalis remain to be identified.
The AniA protein of
N. gonorrhoeae is expressed
in vivo during infection in humans (
13). The
M. catarrhalis AniA protein, also known as Msp78 (
56), has recently been shown to be present in patients during COPD exacerbations associated with
M. catarrhalis infection (
56). The transcriptional regulatory network that controls the expression of the truncated denitrification pathway in
M. catarrhalis under various
in vitro growth conditions is under active investigation. It is hoped that such work will help to elucidate the importance of denitrification in
M. catarrhalis pathogenesis.