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From:
Published online Jun 14, 2011. doi: 10.1093/bioinformatics/btr214
Table 1.
Examples of event-describing phrases
Event typePhrase
Gene expressionAlthough resting Jurkat cells expressFas, …
Positive regulationFas mRNA was induced approximately 10-fold in …
Binding… responses induced by CD40engagement.
PhosphorylationDifferential expression and phosphorylation of CTCF, a c-myc
RegulationTranscriptional regulation of the alpha2 integrin gene in …
Negative regulation…, a specific inhibitor of MAPK kinase 1, …
The terms in bold are protein names, and the italicized words are event triggers.
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