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Acta Crystallogr Sect E Struct Rep Online. 2008 September 1; 64(Pt 9): o1716.
Published online 2008 August 6. doi:  10.1107/S1600536808020515
PMCID: PMC2960632

3-Hydroxy­adamantane-1-acetic acid

Abstract

The crystal structure of the title adamantane derivative, C12H18O3, has been determined by X-ray diffraction. The structure is stabilized by inter­molecular O—H(...)O hydrogen bonds, forming a chain.

Related literature

For related literature, see: Lu & Yang (1996 [triangle]); Tukada & Mochizuki (2005 [triangle]); Zhao et al. (2003 [triangle]).

An external file that holds a picture, illustration, etc.
Object name is e-64-o1716-scheme1.jpg

Experimental

Crystal data

  • C12H18O3
  • M r = 210.26
  • Triclinic, An external file that holds a picture, illustration, etc.
Object name is e-64-o1716-efi1.jpg
  • a = 6.5120 (9) Å
  • b = 7.9485 (11) Å
  • c = 11.5469 (15) Å
  • α = 106.919 (10)°
  • β = 94.838 (10)°
  • γ = 104.443 (7)°
  • V = 545.73 (13) Å3
  • Z = 2
  • Mo Kα radiation
  • μ = 0.09 mm−1
  • T = 296 (2) K
  • 0.30 × 0.13 × 0.10 mm

Data collection

  • Bruker APEXII area-detector diffractometer
  • Absorption correction: multi-scan (SADABS; Sheldrick, 1996 [triangle]) T min = 0.98, T max = 0.99
  • 8786 measured reflections
  • 2488 independent reflections
  • 1574 reflections with I > 2σ(I)
  • R int = 0.033

Refinement

  • R[F 2 > 2σ(F 2)] = 0.048
  • wR(F 2) = 0.130
  • S = 1.03
  • 2488 reflections
  • 142 parameters
  • 2 restraints
  • H atoms treated by a mixture of independent and constrained refinement
  • Δρmax = 0.18 e Å−3
  • Δρmin = −0.17 e Å−3

Data collection: APEX2 (Bruker, 2006 [triangle]); cell refinement: SAINT (Bruker, 2006 [triangle]); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 [triangle]); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 [triangle]); molecular graphics: SHELXTL (Sheldrick, 2008 [triangle]); software used to prepare material for publication: SHELXTL.

Table 1
Hydrogen-bond geometry (Å, °)

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808020515/at2572sup1.cif

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808020515/at2572Isup2.hkl

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

supplementary crystallographic information

Comment

Adamantane and its derivatives have an extensive application in the field of medicine. For instance, adamantaneamine has an obvious effect on controlling the exuviating the influenza A virus and it can alleviate the Parkinson symptom (Lu et al., 1996). A large number of compounds containing amantadine have been synthesized (Tukada & Mochizuki, 2005; Zhao et al., 2003). Here we report the synthesis and crystal structure of the title compound (I), illustrated in Fig. 1.

The title compound (I) is an adamantane derivative. Single-crystal X-ray diffraction analyses demonstrate that hydrogen bonding produces an extensive polymeric network since the hydroxyl group substituents are simultaneously hydrogen bonded to the OH of the carboxyl group on an adjacent molecule and the carbonyl group of a different neighbor forming a 12-membered ring as shown in Fig. 2. A 16-membered ring is formed by intermolecular hydrogen bonding between the carbonyl O and hydroxyl H atoms of two molecules. The alternating 12- and 16-membered rings make the compound to form a one-dimensional network.

Experimental

The 3-hydroxy-1-adamantaneacetic was obtained from Zhejiang Key Laboratory for Reactive Chemistry on Solid Surface. Crystals suitable for single-crystal X-ray diffraction were grown by slow evaporation of distilled water.

Refinement

The H atoms bonded to C atoms were positioned geometrically [C—H = 0.97 Å, Uiso(H) = 1.2Ueq(C)]. The H atoms bonded to O atoms were located in a difference Fourier maps and refined with O—H distance restraints of 0.82 and Uiso(H) = 1.2Ueq(O).

Figures

Fig. 1.
A view of the molecule of (I), showing the atom-labelling scheme. Displacement ellipsoids are shown at the 30% probability level.
Fig. 2.
A packing diagram for the title compound. The O—H···O interactions are depicted by dashed lines.

Crystal data

C12H18O3Z = 2
Mr = 210.26F000 = 228
Triclinic, P1Dx = 1.280 Mg m3
Hall symbol: -P 1Mo Kα radiation λ = 0.71073 Å
a = 6.5120 (9) ÅCell parameters from 1598 reflections
b = 7.9485 (11) Åθ = 1.9–27.5º
c = 11.5469 (15) ŵ = 0.09 mm1
α = 106.919 (10)ºT = 296 (2) K
β = 94.838 (10)ºBlock, colourless
γ = 104.443 (7)º0.30 × 0.13 × 0.10 mm
V = 545.73 (13) Å3

Data collection

Bruker APEXII area-detector diffractometer2488 independent reflections
Radiation source: fine-focus sealed tube1574 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.033
T = 296(2) Kθmax = 27.5º
ω scansθmin = 1.9º
Absorption correction: multi-scan(SADABS; Sheldrick, 1996)h = −8→8
Tmin = 0.98, Tmax = 0.99k = −10→10
8786 measured reflectionsl = −15→15

Refinement

Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.048Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.130H atoms treated by a mixture of independent and constrained refinement
S = 1.03  w = 1/[σ2(Fo2) + (0.052P)2 + 0.1083P] where P = (Fo2 + 2Fc2)/3
2488 reflections(Δ/σ)max < 0.001
142 parametersΔρmax = 0.18 e Å3
2 restraintsΔρmin = −0.17 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

xyzUiso*/Ueq
O10.0947 (2)0.76522 (17)0.09607 (12)0.0581 (4)
H10.024 (3)0.690 (3)0.1232 (19)0.070*
O20.5777 (2)1.30404 (19)0.01092 (13)0.0620 (4)
H20.694 (3)1.295 (3)−0.015 (2)0.074*
O30.7982 (2)1.51594 (19)0.17220 (13)0.0647 (4)
C4−0.0106 (3)0.9805 (3)0.26199 (16)0.0462 (4)
H4B−0.06790.88580.29760.055*
H4A−0.12580.98360.20430.055*
C90.3516 (3)0.9321 (2)0.28586 (16)0.0444 (4)
H9B0.46650.90270.24310.053*
H9A0.29790.83770.32230.053*
C30.1714 (3)0.9376 (2)0.19572 (15)0.0392 (4)
C20.2580 (3)1.0849 (2)0.13783 (15)0.0387 (4)
H2B0.14411.08710.07900.046*
H2A0.37241.05620.09430.046*
C80.5237 (3)1.2664 (2)0.32771 (15)0.0413 (4)
H8B0.58041.38500.39130.050*
H8A0.63991.23910.28540.050*
C70.4377 (3)1.1188 (2)0.38625 (16)0.0441 (4)
H7A0.55411.11540.44440.053*
C60.2554 (3)1.1612 (3)0.45363 (16)0.0494 (5)
H6B0.20121.06760.49060.059*
H6A0.30861.27870.51850.059*
C50.0756 (3)1.1668 (2)0.36319 (16)0.0458 (5)
H5A−0.04111.19490.40650.055*
C100.1616 (3)1.3152 (2)0.30564 (17)0.0464 (5)
H10B0.21461.43380.36940.056*
H10A0.04621.32030.24910.056*
C10.3444 (3)1.2738 (2)0.23674 (14)0.0352 (4)
C110.4224 (3)1.4276 (2)0.18016 (16)0.0457 (5)
H11A0.30651.42010.11860.055*
H11B0.45221.54520.24410.055*
C120.6181 (3)1.4222 (2)0.12218 (16)0.0436 (4)

Atomic displacement parameters (Å2)

U11U22U33U12U13U23
O10.0652 (10)0.0397 (7)0.0542 (8)−0.0080 (6)0.0268 (7)0.0076 (6)
O20.0614 (10)0.0572 (9)0.0552 (9)0.0018 (7)0.0240 (7)0.0091 (7)
O30.0584 (10)0.0567 (9)0.0637 (9)−0.0088 (7)0.0151 (7)0.0171 (7)
C40.0361 (10)0.0536 (11)0.0504 (11)0.0072 (8)0.0157 (8)0.0217 (9)
C90.0466 (11)0.0412 (10)0.0567 (11)0.0145 (8)0.0201 (9)0.0279 (8)
C30.0391 (10)0.0350 (9)0.0390 (9)0.0028 (7)0.0129 (7)0.0099 (7)
C20.0364 (10)0.0412 (9)0.0369 (9)0.0050 (7)0.0088 (7)0.0147 (7)
C80.0393 (10)0.0392 (9)0.0429 (9)0.0043 (8)0.0046 (8)0.0162 (8)
C70.0427 (11)0.0492 (10)0.0432 (10)0.0095 (8)0.0026 (8)0.0237 (8)
C60.0646 (13)0.0448 (10)0.0387 (10)0.0092 (9)0.0153 (9)0.0171 (8)
C50.0464 (11)0.0484 (10)0.0510 (11)0.0180 (9)0.0251 (9)0.0202 (9)
C100.0498 (11)0.0471 (10)0.0519 (11)0.0210 (9)0.0181 (9)0.0218 (9)
C10.0360 (9)0.0351 (9)0.0392 (9)0.0098 (7)0.0110 (7)0.0179 (7)
C110.0564 (12)0.0384 (10)0.0507 (10)0.0156 (9)0.0175 (9)0.0228 (8)
C120.0575 (13)0.0317 (9)0.0449 (10)0.0066 (9)0.0153 (9)0.0208 (8)

Geometric parameters (Å, °)

O1—C31.447 (2)C8—C71.532 (2)
O1—H10.815 (15)C8—H8B0.9700
O2—C121.311 (2)C8—H8A0.9700
O2—H20.850 (16)C7—C61.527 (3)
O3—C121.210 (2)C7—H7A0.9800
C4—C31.519 (2)C6—C51.520 (3)
C4—C51.530 (2)C6—H6B0.9700
C4—H4B0.9700C6—H6A0.9700
C4—H4A0.9700C5—C101.529 (2)
C9—C31.519 (2)C5—H5A0.9800
C9—C71.528 (2)C10—C11.536 (2)
C9—H9B0.9700C10—H10B0.9700
C9—H9A0.9700C10—H10A0.9700
C3—C21.525 (2)C1—C111.546 (2)
C2—C11.532 (2)C11—C121.493 (2)
C2—H2B0.9700C11—H11A0.9700
C2—H2A0.9700C11—H11B0.9700
C8—C11.528 (2)
C3—O1—H1107.3 (15)C9—C7—H7A109.5
C12—O2—H2110.6 (16)C8—C7—H7A109.5
C3—C4—C5109.05 (14)C5—C6—C7109.37 (13)
C3—C4—H4B109.9C5—C6—H6B109.8
C5—C4—H4B109.9C7—C6—H6B109.8
C3—C4—H4A109.9C5—C6—H6A109.8
C5—C4—H4A109.9C7—C6—H6A109.8
H4B—C4—H4A108.3H6B—C6—H6A108.2
C3—C9—C7109.47 (13)C6—C5—C10109.57 (15)
C3—C9—H9B109.8C6—C5—C4109.75 (14)
C7—C9—H9B109.8C10—C5—C4109.33 (14)
C3—C9—H9A109.8C6—C5—H5A109.4
C7—C9—H9A109.8C10—C5—H5A109.4
H9B—C9—H9A108.2C4—C5—H5A109.4
O1—C3—C9110.50 (14)C5—C10—C1110.38 (13)
O1—C3—C4110.82 (13)C5—C10—H10B109.6
C9—C3—C4109.93 (14)C1—C10—H10B109.6
O1—C3—C2106.48 (13)C5—C10—H10A109.6
C9—C3—C2109.35 (13)C1—C10—H10A109.6
C4—C3—C2109.69 (14)H10B—C10—H10A108.1
C3—C2—C1110.46 (12)C8—C1—C2108.35 (13)
C3—C2—H2B109.6C8—C1—C10108.54 (13)
C1—C2—H2B109.6C2—C1—C10108.65 (14)
C3—C2—H2A109.6C8—C1—C11111.84 (14)
C1—C2—H2A109.6C2—C1—C11111.65 (13)
H2B—C2—H2A108.1C10—C1—C11107.71 (13)
C1—C8—C7110.32 (13)C12—C11—C1115.10 (13)
C1—C8—H8B109.6C12—C11—H11A108.5
C7—C8—H8B109.6C1—C11—H11A108.5
C1—C8—H8A109.6C12—C11—H11B108.5
C7—C8—H8A109.6C1—C11—H11B108.5
H8B—C8—H8A108.1H11A—C11—H11B107.5
C6—C7—C9108.98 (14)O3—C12—O2122.43 (17)
C6—C7—C8109.93 (14)O3—C12—C11123.93 (17)
C9—C7—C8109.30 (13)O2—C12—C11113.63 (17)
C6—C7—H7A109.5
C7—C9—C3—O1176.98 (12)C3—C4—C5—C1060.50 (18)
C7—C9—C3—C4−60.38 (17)C6—C5—C10—C160.28 (19)
C7—C9—C3—C260.09 (17)C4—C5—C10—C1−60.04 (19)
C5—C4—C3—O1−177.88 (13)C7—C8—C1—C2−59.16 (17)
C5—C4—C3—C959.68 (17)C7—C8—C1—C1058.66 (17)
C5—C4—C3—C2−60.59 (18)C7—C8—C1—C11177.35 (14)
O1—C3—C2—C1−179.80 (13)C3—C2—C1—C859.39 (17)
C9—C3—C2—C1−60.39 (17)C3—C2—C1—C10−58.36 (17)
C4—C3—C2—C160.23 (18)C3—C2—C1—C11−177.01 (14)
C3—C9—C7—C660.25 (16)C5—C10—C1—C8−59.19 (18)
C3—C9—C7—C8−59.91 (18)C5—C10—C1—C258.44 (18)
C1—C8—C7—C6−59.55 (18)C5—C10—C1—C11179.54 (14)
C1—C8—C7—C960.02 (18)C8—C1—C11—C1253.8 (2)
C9—C7—C6—C5−60.32 (17)C2—C1—C11—C12−67.8 (2)
C8—C7—C6—C559.45 (18)C10—C1—C11—C12172.94 (15)
C7—C6—C5—C10−59.72 (18)C1—C11—C12—O3−98.6 (2)
C7—C6—C5—C460.34 (18)C1—C11—C12—O280.82 (19)
C3—C4—C5—C6−59.71 (17)

Hydrogen-bond geometry (Å, °)

D—H···AD—HH···AD···AD—H···A
O1—H1···O3i0.815 (15)1.995 (16)2.7959 (18)168 (2)
O2—H2···O1ii0.850 (16)1.811 (16)2.649 (2)168 (2)

Symmetry codes: (i) x−1, y−1, z; (ii) −x+1, −y+2, −z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: AT2572).

References

  • Bruker (2006). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  • Lu, F. X. & Yang, Y. (1996). Handbook of Clinic Practical Drugs Nanjing: Jiangsu Science and Technology Press.
  • Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
  • Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [PubMed]
  • Tukada, H. & Mochizuki, K. (2005). J. Mol. Struct.655, 473–478.
  • Zhao, G. L., Feng, Y. L., Hu, X. C. & Kong, L. C. (2003). Chin. J. Appl. Chem.20, 802–808.

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