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From:
Published online 2010 September 23. doi: 10.1371/journal.pgen.1001131

Table 7

P-values of 20 pairs of interacting SNPs calculated by the statistic TIH, PLINK, and logistic regression coded by genotypes.
P-Value
Dataset1Dataset2
TIH PLINKLogistic RegressionTIH PLINKLogistic Regression
rs1Gene 1rs2Gene 2RecessiveAdditiveDominantRecessiveAdditiveDominant
626072LAMA16121989LAMA51.11E-151.63E-072.61E-027.82E-083.14E-065.67E-070.0018543.65E-021.40E-031.10E-01
626072LAMA14925386LAMA51.47E-131.01E-067.64E-025.82E-071.05E-059.81E-070.0027095.07E-021.88E-031.27E-01
1052248LST1/NCR33131636MICB5.56E-132.86E-098.61E-031.14E-091.11E-057.76E-101.76E-054.47E-019.67E-069.75E-06
1052248LST1/NCR33132468MICB8.41E-134.28E-091.16E-021.72E-091.10E-058.96E-102.03E-054.75E-019.97E-067.73E-06
443198NOTCH43131636MICB1.13E-116.14E-083.29E-012.95E-084.53E-053.98E-086.33E-052.93E-023.63E-057.83E-04
443198NOTCH43132468MICB1.19E-102.81E-073.21E-011.52E-071.57E-046.55E-086.32E-052.81E-024.65E-051.39E-03
1799964LTA/TNF3131636MICB1.62E-103.08E-077.09E-021.52E-073.68E-021.36E-097.26E-054.19E-013.25E-052.59E-06
1799964LTA/TNF3132468MICB2.94E-107.26E-079.57E-023.80E-073.80E-022.51E-098.30E-054.51E-014.33E-052.76E-06
4766587ACACB4807055NDUFA113.07E-106.25E-053.13E-044.84E-054.51E-016.61E-070.0008553.27E-037.74E-049.85E-01
2227956HSPA1L3135392HLA-DRA3.20E-102.46E-061.14E-041.49E-062.63E-027.82E-109.60E-067.29E-055.17E-062.14E-01
1060856ALDH7A12711288PRKCE3.57E-103.01E-051.93E-071.71E-058.81E-012.56E-070.0002927.50E-012.09E-042.26E-04
2012359PARP410823333HK15.65E-103.84E-051.26E-042.70E-051.37E-017.20E-070.0001482.06E-047.68E-051.00E+00
9311951MAGI111195879NRG38.53E-106.22E-051.00E-033.29E-053.40E-038.25E-070.0018083.81E-021.09E-031.71E-02
3768650STAM211993811FGF209.20E-104.53E-068.71E-052.52E-061.18E-013.25E-080.0001151.25E-039.91E-058.50E-01
785915GCNT111713331PRICKLE21.30E-095.34E-055.01E-013.64E-053.37E-042.95E-073.82E-057.13E-054.26E-053.70E-02
785916GCNT111713331PRICKLE21.37E-096.08E-055.08E-014.21E-054.32E-045.51E-076.98E-051.31E-048.08E-056.61E-02
1202674RPS6KA26061796CDH42.46E-094.19E-053.78E-013.11E-051.12E-051.63E-080.0005166.48E-033.18E-047.53E-04
1048471ST3GAL12830096APP2.95E-092.43E-054.55E-041.84E-051.00E-019.63E-070.0011051.11E-011.09E-033.65E-03
1025951GALNT1317568302FMO23.40E-093.39E-053.16E-032.36E-052.26E-019.29E-070.0024023.30E-031.94E-031.39E-02
6954KIAA04674773873ABCC43.67E-093.30E-061.24E-042.25E-063.11E-034.74E-070.0034165.42E-011.59E-031.36E-02