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Logo of bmcdbBioMed Centralsearchsubmit a manuscriptregisterthis articleBMC Developmental Biology
BMC Dev Biol. 2010; 10: 87.
Published online 2010 August 12. doi:  10.1186/1471-213X-10-87
PMCID: PMC2930600

The novel mouse mutant, chuzhoi, has disruption of Ptk7 protein and exhibits defects in neural tube, heart and lung development and abnormal planar cell polarity in the ear



The planar cell polarity (PCP) signalling pathway is fundamental to a number of key developmental events, including initiation of neural tube closure. Disruption of the PCP pathway causes the severe neural tube defect of craniorachischisis, in which almost the entire brain and spinal cord fails to close. Identification of mouse mutants with craniorachischisis has proven a powerful way of identifying molecules that are components or regulators of the PCP pathway. In addition, identification of an allelic series of mutants, including hypomorphs and neomorphs in addition to complete nulls, can provide novel genetic tools to help elucidate the function of the PCP proteins.


We report the identification of a new N-ethyl-N-nitrosourea (ENU)-induced mutant with craniorachischisis, which we have named chuzhoi (chz). We demonstrate that chuzhoi mutant embryos fail to undergo initiation of neural tube closure, and have characteristics consistent with defective convergent extension. These characteristics include a broadened midline and reduced rate of increase of their length-to-width ratio. In addition, we demonstrate disruption in the orientation of outer hair cells in the inner ear, and defects in heart and lung development in chuzhoi mutants. We demonstrate a genetic interaction between chuzhoi mutants and both Vangl2Lp and Celsr1Crsh mutants, strengthening the hypothesis that chuzhoi is involved in regulating the PCP pathway. We demonstrate that chuzhoi maps to Chromosome 17 and carries a splice site mutation in Ptk7. This mutation results in the insertion of three amino acids into the Ptk7 protein and causes disruption of Ptk7 protein expression in chuzhoi mutants.


The chuzhoi mutant provides an additional genetic resource to help investigate the developmental basis of several congenital abnormalities including neural tube, heart and lung defects and their relationship to disruption of PCP. The chuzhoi mutation differentially affects the expression levels of the two Ptk7 protein isoforms and, while some Ptk7 protein can still be detected at the membrane, chuzhoi mutants demonstrate a significant reduction in membrane localization of Ptk7 protein. This mutant provides a useful tool to allow future studies aimed at understanding the molecular function of Ptk7.


Congenital anomalies remain a serious clinical problem, affecting over 15,000 pregnancies per year in the UK, and 110,000 pregnancies per year across Europe [1]. Amongst the most common forms of birth defect are those involving the cardiovascular or nervous systems, in around 30% and 10% of cases, respectively. Basic research into the causes of birth defects is required, in order to enable progress in helping to prevent these disorders.

The mouse is an appropriate model organism for the study of many human birth defects, including nervous system and cardiovascular abnormalities. The developmental basis of mouse neural tube closure and heart formation mirrors that in human gestation, while the ability to genetically manipulate the mouse allows valuable experimental approaches. N-ethyl-N-nitrosourea (ENU) mutagenesis has proven a powerful method for the creation of novel mouse mutants that provide models of human birth defects. Moreover, the random nature of single base substitutions generated by ENU permits the formation of an allelic series of mutations at any locus, facilitating the determination of gene and protein function.

The central nervous system develops from the neural tube, an embryonic precursor that is formed early in human gestation, at around 24-28 days following conception. The morphological events of human neural tube formation are mirrored closely in the mouse, with a well characterised sequence of events that take place between embryonic day (E) 8.5 and 10.5 of mouse development [2]. Neural tube closure initiates at the base of the future hindbrain, termed closure 1, at around the 5 somite stage. Two further sites of closure initiation are observed at about the 12 somite stage, one near the forebrain-midbrain boundary (closure 2) and the other at the rostral extent of the forebrain (closure 3). Continuation of closure between these points results in the completion of cranial closure by around the 17 somite stage, while progressive closure along the spine continues as the embryo elongates, with final closure at the posterior neuropore at about the 30 somite stage.

Failure to complete the normal process of neural tube closure results in neural tube defects (NTDs), which affect around 1 in 1000 established pregnancies [2]. The type of neural tube defect depends on the region of the embryonic axis that is affected. Anencephaly occurs following failure to complete closure in the head, while spina bifida results from disruption of posterior neuropore closure. Failure of the initial event of neural tube closure (closure 1) results in the most severe form of NTD, craniorachischisis, in which almost the entire brain and spinal cord remains open. Anencephaly and craniorachischisis are invariably lethal, owing to the disruption of brain formation. Cases of spina bifida are compatible with postnatal survival but often associated with lower body paralysis or dysfunction. Craniorachischisis accounts for around 10% of NTD cases [3].

Studies with model organisms are essential in helping to elucidate the genetic, molecular and cellular defects that cause these congenital abnormalities which, in turn, provides the potential to identify and develop novel preventative therapies. Over 190 mouse mutants are known with neural tube defects [4] however relatively few of these exhibit the condition of craniorachischisis. Indeed, mutations in only eleven genes leads to craniorachischisis, which makes the identification of novel mutants with this disorder of high scientific and clinical interest.

Strikingly, amongst those mutants with craniorachischisis, almost all genes affect the planar cell polarity (PCP) signalling pathway, either directly or indirectly. The PCP pathway was first identified in Drosophila, since disruption of the polarity of cells within an epithelial plane (planar cell polarity) leads to visible phenotypes that include disruption of the regular orientation of hairs on the wings and misorientated ommatidia in the eye. A set of proteins were defined as the core components of the PCP pathway, since they are required for PCP in multiple tissues. These core components include the transmembrane proteins, strabismus/van gogh, flamingo/starry night and frizzled (Fz), and the intracellular protein dishevelled (Dsh). The PCP pathway is also known as the non-canonical Wnt pathway, since it shares components (Dsh and Fz) with the canonical Wnt-β-catenin signalling pathway; however, the Drosophila ligand for PCP remains unknown. Several of the mouse craniorachischisis mutants affect genes that are homologues of these core PCP proteins, including Vangl1 and Vangl2 (strabismus/van gogh homologues), Celsr1 (flamingo/starry night), Frizzled and Dishevelled [5-12]. These genes are required for planar cell polarity in mammals, as evidenced by disruption of the regular orientation of sensory hair cells within the cochlear epithelium in mutants for Celsr1 [7], Vangl2 [8,10,13], Vangl1/Vangl2 [10] and Fz3/Fz6 [8], and disruption of the planar arrangement of hair follicles in Fz6 [14], Vangl2 and Celsr1 mutants [15]. Craniorachischisis is also observed following disruption of mouse Scrib [16]. Although originally defined as a gene involved in apical-basal polarity rather than planar polarity, several lines of evidence indicate that Scribble affects PCP signalling; mouse Scrib mutants demonstrate defects in PCP generation in the inner ear [13], Scrib demonstrates genetic and biochemical interactions with Vangl2 [13,17-19] and Drosophila Scrib has recently been shown to play a role in PCP [20]. Similarly, Ptk7 mutants exhibit craniorachischisis and PCP defects in the inner ear [21]. Ptk7 mutant mice demonstrate a genetic interaction with Vangl2 [21], while Xenopus Ptk7 forms a complex with Dishevelled and Frizzled7 [22]. Most recently, mutation of Sec24b has been shown to cause craniorachischisis, and Sec24b affects PCP through regulation of Vangl2 protein trafficking [23,24].

Here, we report the identification of a new ENU-induced mutant allele that we have named chuzhoi (chz). Homozygous chuzhoi mutants exhibit craniorachischisis, owing to failure to initiate neural tube closure in the future cervical region, closure 1. We demonstrate that the phenotype of chuzhoi mutant embryos is consistent with a defect in convergent extension, with a broadened midline and reduced rate of increase in the length-to-width ratio of mutant embryos compared to wild-type. In addition, we demonstrate that chuzhoi mutants exhibit disruption of planar cell polarity in the inner ear, and exhibit a genetic interaction with both Vangl2 and Celsr1. Thus, chuzhoi mutants exhibit a number of key characteristics of a planar cell polarity mutant. We show that chuzhoi maps to the central region of Chromosome 17, and demonstrate that chuzhoi carries a splice site mutation in Ptk7. This mutation is predicted to cause the insertion of three extra amino acids into the Ptk7 protein. Chuzhoi mutants exhibit disruption of the expression of the Ptk7 protein. This new mutant provides an additional genetic resource to help define the developmental role of the PCP pathway and the molecular function of Ptk7.


Chuzhoi is a novel mutant with severe neural tube defects

Chuzhoi arose during a screen for recessive ENU-induced mutations that affect the morphology of mid-gestation embryos [25]. The mutant was identified through the presence of the severe neural tube defect of craniorachischisis, in which the neural tube was open from the midbrain/hindbrain boundary throughout the spinal cord (Figure 1B-D, compare to to1A).1A). Mutants exhibited a shortening and kinking of the body axis and some displayed ventral body wall closure defects (probably omphalocele), with protrusion of the guts and liver (Figure (Figure1C,1C, observed in 48% of fetuses at E16.5 or older; n = 13/27). Mutants also commonly displayed failure of eyelid closure (Figure (Figure1C,1C, seen in 52% of fetuses at E16.5 or older; n = 14/27). Skeletal preparations revealed splayed vertebrae in chuzhoi homozygotes, a consequence of the open neural tube defect, and clearly demonstrated a shortening and skewing of the spinal cord (Figure (Figure1F,1F, compare to to1E).1E). Skeletal preparations also demonstrated fusions and bifurcations of the ribs in chuzhoi mutants (Figure (Figure1H,1H, compare to to1G)1G) and occasional (~7% fetuses) postaxial or preaxial polydactyly (Figure 1J-L, compare to to1I1I).

Figure 1
Chuzhoi mutants exhibit multiple developmental abnormalities. (A-D) E17.5 wild-type (A) and chuzhoi embryos (B-D) in lateral (A-C) and dorsal view (D). Chuzhoi embryos demonstrate the severe neural tube defect of craniorachischisis, where the neural tube ...

Severe neural tube defects in chuzhoi are consistent with a defect in convergent extension

Craniorachischisis occurs as a result of failure to initiate neural tube closure. Examination of embryos over the time of closure 1 (E8.5, 4- to 9-somite stage) revealed that in +/+ and chz/+ embryos neural tube closure was initiated at the 5- to 7-somite stage and, at E9.0, only the posterior neuropore remained open (Figure 2A,C). In contrast, chuzhoi homozygous mutant embryos failed to initiate neural tube closure at E8.5 and, at E9.0, although the forebrain was closed the rest of the neural tube was persistently open (Figure 2B,D), even at later embryonic and fetal stages (Figure 1B-D). Several mouse mutants with craniorachischisis exhibit an abnormal, broadened morphology of the ventral midline of the neural plate at the stage and site of closure 1, as seen in Vangl2Lp/Lp [26], ScribCrc/Crc [16], Celsr1Crsh/Crsh (unpublished data) mutants and the Ptk7 gene trap allele [21]. This defect is thought to mechanically prevent Closure 1 by placing the neural folds too far apart to appose and fuse [26]. We examined chuzhoi embryos in order to determine if this morphological defect is present. Histological sections demonstrated a broadened morphology of the neuroepithelium in chuzhoi mutants, creating a U-shaped ventral midline that is distinct from the V-shaped midline observed in wild-type embryos (Figure 2E,F). Wholemount in situ hybridization with probes for Brachyury and Shh confirmed the wider structure of the floor plate and notochord, evident particularly in posterior embryonic regions, just anterior to the primitive streak (Figure 2G,H and data not shown). The morphology of the node appeared abnormal by E8.5 (Figure 2I,J), with a shortened anterior-posterior length and enlarged width in chuzhoi, while at E7.5 no reproducible difference in node morphology was apparent between mutant and wild-type embryos (Figure 2K,L).

Figure 2
Chuzhoi mutants exhibit a failure of closure 1 and a broadened midline. (A, B) Dorsal views of 6-somite E8.5 wild-type (A) and chuzhoi mutant (B) embryos demonstrating initiation of neural tube closure in the wild-type (arrow, A) but failure to initiate ...

The cause of the broadened midline in Vangl2Lp/Lp mutants has been reported as a defect in the cellular process of convergent extension [27]. A defect in mesodermal convergent extension in the Ptk7 gene trap allele has also been reported [28]. To assess convergent extension in chuzhoi mutants, we measured the length and width of embryos over the time of neurulation (Figure 3A,B). We found a significant reduction in the rate of increase of the length/width ratio, in chuzhoi mutants compared to wild-type and heterozygous littermates (Figure (Figure3B).3B). This is consistent with a disruption of convergent extension in the chuzhoi mutants. In contrast, other tissue and cellular characteristics were normal in chuzhoi mutants, including rates of cellular proliferation (Figure 3C-E) and apical-basal polarity (Figure 3F-H) within the neuroepithelium at the stage and site of closure 1.

Figure 3
Chuzhoi mutants exhibit reduced length to width ratio but no change in proliferation or polarity. (A) Measurements of midline axial length and width of embryos at the level of the third somite, around the time of Closure 1. (B) Comparison of length to ...

Chuzhoi mutants exhibit disruption of planar cell polarity in the inner ear

Mutants with craniorachischisis often disrupt regulation of planar cell polarity, evident most easily from disruption of the regular orientation of sensory hair cells within the cochlear epithelium. This prompted us to examine hair cell polarity in chuzhoi mutants. Phalloidin staining revealed the typical wild-type pattern of three rows of outer hair cells (OHC) and one row of inner hair cells (IHC) with uniformly polarized arrangement of stereociliary bundles in the basal regions of the organ of Corti from E18.5 heterozygous fetuses (Figure (Figure4A).4A). In contrast, basal cochlea regions of chuzhoi mutants exhibit disruption of the arrangement of the stereociliary bundles on the third row of outer hair cells (Figure (Figure4B),4B), with randomised cell orientation. Apical regions of the cochlea in heterozygous mice also conform to the normal arrangement of three rows of OHC and one row of IHC (Figure (Figure4C).4C). However, chuzhoi homozygous mutants demonstrate a broadened region of OHC with four apparent rows of cells, plus also additional cells external to the row of inner hair cells (Figure (Figure4D).4D). These data reveal that chuzhoi mutants have disruption of planar cell polarity in the inner ear.

Figure 4
Chuzhoi mutants exhibit PCP phenotype in the inner ear. Phalloidin staining of E18.5 organ of Corti from heterozygous (A, C) and homozygous chuzhoi mutants (B, D), with images from the basal (A, B) or apical (C, D) region of the cochlea. Heterozygous ...

Chuzhoi mutants exhibit abnormal lung development

Our recent observation of lung defects in other PCP mutants [29], prompted us to examine lung morphology in chuzhoi mutants. Chuzhoi mutants exhibited striking defects in lung development. At E18.5, the lung lobes were reduced in size and highly misshapen (Figure (Figure5D)5D) compared to wild-type littermates (Figure (Figure5A).5A). Histological examination of the lung lobes revealed thickened interstitial mesenchyme with infrequent septation, in homozygous chuzhoi mutants compared to wild-type littermates (Figure 5E,F, compare to 5B,C). These defects will result in reduced airway space, and this would be expected to cause breathing difficulties after birth, though this is impossible to determine since mutants die at birth from the severe neural tube defects. Notably, the chuzhoi lung phenotype is similar to that observed in other mutants with craniorachischisis, including Vangl2Lp/Lp, Celsr1Crsh/Crsh [29], and ScribCrc/Crc (Yates et al, in preparation).

Figure 5
Chuzhoi mutants exhibit abnormal lung development. (A, D) Examination of the gross morphology of the lungs from E18.5 wild-type (A) and chuzhoi mutant (D) fetuses showed small and misshapen lobes in the mutants. (B, C, E, F) Haemotoxylin and eosin-stained ...

Chuzhoi mutants exhibit abnormal heart development

Several mouse mutants with craniorachischisis also exhibit heart defects, prompting us to examine chuzhoi mutants for cardiac malformations. Seven chuzhoi homozygous embryos were examined at E17.5 for cardiovascular abnormalities. Of these, five had obvious malformations affecting the outflow region of the heart. In normal hearts, the aorta exits from the left ventricle (Figure (Figure6A)6A) whereas the pulmonary trunk, which gives rise to the pulmonary arteries, exits from the right ventricle (Figure (Figure6C).6C). In contrast, in three chuzhoi embryos, the defect of double outlet right ventricle was observed, whereby both the aorta and the pulmonary trunk exit from the right ventricle (Figure 6B,D). This was found, in each case, in association with a ventricular septal defect (Figure (Figure6F,6F, compare to to6E).6E). In the remaining two cases, the connections between the ventricles and the great arteries were concordant, although the vessels were parallel rather than spiralling round one another. Interestingly, in three out of seven hearts examined, the pulmonary arteries, and to a lesser extent the pulmonary veins, were abnormally dilated (data not shown); this did not correlate with the presence of double outlet right ventricle.

Figure 6
Chuzhoi mutants exhibit defects in cardiovascular development. Transverse sections through the thoracic region of wild-type (A, C, E) and chuzhoi homozygous mutant (B, D, F) E17.5 fetuses, stained with haematoxylin and eosin. In control hearts at E17.5, ...

The phenotype of double outlet right ventricle in the Vangl2Lp/Lp mutant is attributed, at least in part, to gross abnormalities in embryo morphology, with incomplete embryonic turning and abnormal heart looping. We examined chuzhoi mutant embryos for a similar defect. Abnormalities in cervical flexure are observed in homozygous Vangl2Lp/Lp mutants [30]. Similarly, a pronounced reduction in cervical flexure was evident in chuzhoi mutant embryos, compared to wild-type littermates (Figure 7A,B). At E10.5, positioning of the developing heart appeared to be abnormal in chuzhoi homozygous mutants. The looping of the heart is reduced, but this may be a secondary consequence of the incomplete embryonic turning and consequent abnormal malformation of the embryo; the angle of the malformed heart is similar to the angle of the forelimb buds, in both wild-type and mutant embryos (Figure 7C-F). We propose that the defects in cardiovascular development may, at least in part, be secondary to defects in early heart morphological changes, which may themselves be caused by defects in embryonic turning. The observed kinking of the body axis at later stages, noted above (Figure (Figure1F)1F) is also indicative of incomplete embryonic turning.

Figure 7
Chuzhoi mutants exhibit reduced cervical flexure and abnormal heart looping. (A, B) Lateral views of E18.5 fetuses demonstrate reduced cervical flexure in chuzhoi mutants (B) compared to wild-type littermates (A). Lines are drawn between the mouth opening ...

Chuzhoi mutants exhibit minor defects in neural crest cell distribution

Heart defects can arise owing to abnormal neural crest cell specification or migration, prompting us to examine neural crest cell distribution in chuzhoi mutant embryos. Sox10 is expressed in neural crest cells as they emerge from the dorsal side of the neural tube and in derivatives including cranial and dorsal root ganglia (Figure 8A-F) [31]. Examination of Sox10 expression demonstrated the presence of migrating neural crest cells in chuzhoi mutant embryos, although their distribution appeared abnormal. In the branchial region, chuzhoi mutants exhibited an apparent fusion of the ninth and tenth cranial ganglia (Figure 8G,H,J,K), while the trigeminal ganglion appeared enlarged and misshapen (Figure 8H,K). The distribution of neural crest cells in the spinal region also appeared abnormal, with a narrower domain of Sox10 expression and disturbance of the normal V-shaped arrangement of cells (Figure 8I,L, compare to 8C,F). This may be a consequence of the altered morphology of the somites and dorsal root ganglia in the mutant embryos. The anomalies in Sox10 expression pattern suggest that although there are some defects in neural crest cell distribution, there is no substantial defect in neural crest cell migration. This conclusion is further supported by several additional observations in chuzhoi mutant embryos, including: the presence of approximately normally sized thymic rudiments; comparable Sox9 expression patterns in neural crest derivatives; normal α-smooth muscle actin staining in the outflow tract at E11.5, and normal outflow tract septation (data not shown).

Figure 8
Chuzhoi mutants exhibit minor defects in neural crest cell distribution. (A-L) Wholemount in situ hybridisation for Sox10 expression at E10.5 in wild-type (A-C), heterozygous (D-F) and chuzhoi homozygous mutant (G-L) embryos. Wild-type and heterozygous ...

Chuzhoi genetically interacts with Vangl2Lp and Celsr1Crsh but not ScribCrc

The chuzhoi mutants exhibit phenotypic similarity with other mouse mutants, including Vangl2Lp/Lp, ScribCrc/Crc and Celsr1Crsh/Crsh. All four mutants exhibit craniorachischisis and defects in eyelid closure, while a ventral closure defect is observed with high penetrance in ScribCrc/Crc and lower penetrance in both Vangl2Lp/Lp and Celsr1Crsh/Crsh [7,17,32]. We have previously reported that Vangl2Lp and ScribCrc genetically interact, such that doubly heterozygous fetuses exhibit craniorachischisis [17]. Similarly, Vangl2Lp and Celsr1Crsh genetically interact, as do ScribCrc and Celsr1Crsh; in both cases, a proportion of doubly heterozygous embryos demonstrate severe neural tube defects (Damrau et al, in preparation). The Ptk7 gene trap allele demonstrates a genetic interaction with Vangl2Lp [21]. These results prompted us to test for a genetic interaction between chuzhoi and other mutants with craniorachischisis. Heterozygous chuzhoi mice were intercrossed with either Vangl2Lp/+, ScribCrc/+ or Celsr1Crsh/+ heterozygotes, and embryos examined for a mutant phenotype. In all cases, the proportion of double mutants obtained followed expected Mendelian ratios (Table (Table1).1). The phenotypes and penetrance of interactions varied markedly, between mutants. While in all cases, the majority of doubly heterozygous embryos were phenotypically normal (Figure 9A,D), a proportion of Vangl2Lp/+;chz/+ embryos exhibited spina bifida (23%) or craniorachischisis (6%, Figure 9B,D), while some doubly heterozygous Celsr1Crsh/+; chz/+ embryos displayed spina bifida (6%, Figure 9C,D). In contrast, the doubly heterozygous ScribCrc/+ ; chz/+ embryos were all phenotypically normal (Figure (Figure9D).9D). The range of phenotypes, and the penetrance of these defects, is distinct to that observed for intercrosses between other craniorachischisis mutants, such as Vangl2Lp/+; ScribCrc/+ [17] and Vangl2Lp/+; Celsr1Crsh/+ (unpublished data). The variation of phenotypes and penetrance may be partly attributed to genetic background effects. Nevertheless, the observation of an interaction between chuzhoi and both Vangl2Lpand Celsr1Crsh suggests that the gene disrupted in chuzhoi plays a role in modifying PCP signalling in the mammalian embryo.

Table 1
Intercrosses between chuzhoi and Vangl2Lp/+, ScribCrc/+ and Celsr1Crsh/+ generate offspring in the expected Mendelian ratios
Figure 9
Chuzhoi mutants genetically interact with loop-tail and crash but not circletail. (A-C) Intercrosses of chuzhoi with Vangl2Lp/+, ScribCrc/+ and Celsr1Crsh/+ generated doubly heterozygous fetuses with either no overt phenotypic abnormality (A), craniorachischisis ...

Chuzhoi carries a splice site mutation in Ptk7 generating a three amino acid insertion

Genetic mapping using a genome-wide panel of 56 SNP markers on 12 affected individuals revealed linkage to Chromosome 17 (Figure 10A). Analysis with additional microsatellite markers and increased numbers of affected individuals refined the critical region to 28 Mb (Figure 10B). This region contains many genes, including Ptk7. Since a gene trap allele of Ptk7 exhibits similar phenotypes to chuzhoi [21] we examined Ptk7 in this mutant. Sequencing of cDNA revealed a nine nucleotide insertion in the Ptk7 transcript in chuzhoi mutants (Figure 10C) while analysis of chuzhoi genomic DNA identified a single nucleotide substitution at the 3' end of Ptk7 intron nine (1475-10A > G; Figure 10D). This intron is of the GT-AG subtype, and the mutation creates a splice acceptor site with closer similarity to the consensus sequence [33] than the wild-type (Figure 10E). The new splice acceptor site in chuzhoi results in the nine nucleotide insertion in the transcript which encodes three amino acids in the Ptk7 protein (Figure 10C,F). Following breeding of chuzhoi to congenicity, all phenotypically abnormal embryos (n = 76, E10.5 or older) genotype as homozygous mutant for Ptk7, supporting this mutation as being causative for the craniorachischisis phenotype. Moreover the colony is maintained by genotyping at the Ptk7 mutation, with no observed recombination events between this and the chuzhoi mutant phenotype. Thus, despite over 200 opportunities for meiotic recombination, chuzhoi has not segregated from the Ptk7 mutation providing further support to our hypothesis that disruption of Ptk7 is causative for the chuzhoi mutant phenotype.

Figure 10
Positional cloning of chuzhoi demonstrates mutation of Ptk7. (A) Genome wide scan shows linkage of chuzhoi to Chromosome 17; percentage of mice typing as homozygous BALB/c is shown for each marker. (B) Genetic map with additional markers; numbers on left ...

Mouse Ptk7 encodes a type Ia transmembrane protein of 1062 amino acids with seven extracellular immunoglobulin-like domains and an intracellular kinase homology domain [34]. Analysis by Western blotting with an antibody raised against the extracellular domain of Ptk7 detects two isoforms, of approximately 140 and 100 kDa [21]. Since experimental analyses give no evidence for alternative splicing of mouse Ptk7 [34], and there is annotation of only a single transcript in Ensembl (Release 57, March 2010), the 140 kDa band is likely to be full length N-glycosylated Ptk7 protein while the smaller isoform may be a cleavage product [21]. The splicing mutation in chuzhoi is predicted to insert the three amino acids alanine-asparagine-proline into the protein, after the fifth IG-like domain (pLeu491_Glu492insAlaAsnPro, Figure 10F). Western blot analysis revealed a change in abundance of Ptk7 in the mutant embryos. In chuzhoi embryos at E10.5, abundance of the full length protein was slightly increased but, more significantly, abundance of the smaller isoform was markedly reduced, relative to wild-type littermates (Figure 10G,H) although Ptk7 remains entirely in the membrane fraction of protein extracts. At earlier embryonic stages, around the time of initiation of neural tube closure, the expression of Ptk7 was reduced relative to later embryonic stages and, more notably, the abundance of the smaller isoform was reduced relative to the larger isoform (Figure 10G and data not shown). Nevertheless, the abundance of the smaller isoform was detectably decreased in chuzhoi homozygous mutants (Figure 10G). This demonstrates that the insertion in Ptk7 in chuzhoi mice causes a detectable change in the Ptk7 protein. Together, the mapping, phenotyping, genotyping and protein data provide strong evidence to support our hypothesis that chuzhoi is a new allele of Ptk7.

Ptk7 expression coincides with regions of phenotypic defects in chuzhoi

We examined the expression of Ptk7 in neurulation stage embryos by wholemount in situ hybridization and immunofluorescence. As reported previously [21,34], Ptk7 RNA was first detected at the caudal end of embryos, during head fold and early somite stages (Figure 11A and data not shown). At the 4-somite stage, immediately prior to Closure 1, Ptk7 continued to be expressed most intensely at the caudal end of the embryo, while lower levels of expression were detected elsewhere, including the neuroepithelium and somites (Figure 11B). Intense caudal staining continued at later stages, with less intense staining evident elsewhere (Figure 11C). Ptk7 encodes a transmembrane protein, and immunostaining with an anti-Ptk7 antibody detects Ptk7 within the cell membrane [28]. Immunofluoresence on transverse sections of 4-somite stage embryos detected Ptk7 within the cell membranes of both the neuroepithelium and mesenchyme (Figure 11D,E). In contrast, we observed a significant reduction in membrane localization of Ptk7 in the chuzhoi mutant (Figure 11F,G, compare to 11D,E and data not shown). It is important to note that in chuzhoi mutants, some Ptk7 protein can still localize to the membrane; however, the protein levels are much reduced. The chuzhoi mutant images (Figure 11F) required longer exposure times (192 ms) than wild-type sections (Figure 11D, 57 ms) in order to provide broadly comparable photographs, in keeping with the reduced expression detectable by Western blotting. The difference observed in chuzhoi mutants adds further support to the argument that chuzhoi mutation affects the Ptk7 gene.

Figure 11
Ptk7 expression correlates with tissue defects in chuzhoi. (A-C) Wholemount in situ hybridisation for Ptk7 expression over the time of neurulation reveals robust staining in the caudal region and less intense staining elsewhere; dorsal (A, B) and lateral ...

At later embryonic stages, Ptk7 mRNA was detected in several other tissues, including the eyelid epithelium (Figure 11H) and, most intensely, in the lung epithelium (Figure 11I), while sense controls gave no detectable staining (data not shown). Expression of Ptk7 in eyelid epithelium correlates with the defect in eyelid closure observed in chuzhoi mutants and the Ptk7 gene-trapped allele [21]. Notably, several other PCP genes are expressed in the eyelid epithelium, including Vangl2, Scrib and Celsr1, and mutants for these genes also exhibit eyelid closure defects [7,32]. Expression in the lung epithelium is consistent with defects observed in lung development and, again, mirrors the lung expression of Vangl2, Scrib and Celsr1.

Chuzhoi mutants show no alteration in the stability or localization of Vangl2 or Celsr1, and Ptk7 protein shows no disruption in Vangl2 or Celsr1 mutants

We examined the expression of Ptk7 protein in Vangl2Lp/Lp, Celsr1Crsh/Crsh and ScribCrc/Crc homozygous mutant embryos at the time of onset of neural tube closure, by Western blotting. At this embryonic stage, most Ptk7 protein appeared to be present as the full length form, with barely detectable levels of cleaved isoform. No difference in overall amounts of Ptk7 were observed in any of the mutants, compared to their heterozygous and wild-type littermates (Figure 12A). We examined the cleavage of Ptk7 in Vangl2Lp/Lp, Celsr1Crsh/Crsh and ScribCrc/Crc mutants, by repeating the Western analysis with E10.5 embryos. No difference in the proportion of full length and cleaved isoforms was observed in any of the mutants, compared to their wild-type littermates, and both isoforms were retained in the membrane fraction in all cases (data not shown). In addition, we examined the expression of Scrib, Vangl2 and Celsr1 in chuzhoi mutant embryos, at the time of initiation of neural tube closure. No observable difference was apparent between the amount of Scrib, Vangl2 or Celsr1 protein expressed in chuzhoi homozygous embryos, compared to wild-type littermates (Figure 12B-D). Therefore the interaction between chuzhoi and Vangl2Lp and Celsr1Crsh appears to be mediated by changes other than expression levels of the proteins.

Figure 12
Examination of expression of Vangl2 and Celsr1 in chuzhoi mutants, and Ptk7 in Vangl2 and Celsr1 mutants. (A) Western blot analysis of Ptk7 expression in total cell lysates from E8.5 ScribCrc/Crc, Vangl2Lp/Lp, and Celsr1Crsh/Crsh mutants, compared to ...

The genetic interaction may alternatively be mediated through changes in the subcellular localisation of the proteins. We assessed this possibility by immunofluorescence. Ptk7 was detected in the cell membranes of both neuroepithelium and mesoderm in wild-type embryos immediately prior to the onset of neurulation (Figure 12E). A similar distribution of Ptk7 was detected in both Celsr1Crsh/Crsh and Vangl2Lp/Lp mutants at this stage (Figure 12F,G), with no obvious defect in Ptk7 localisation. We also examined the expression of Vangl2 and Celsr1 in chuzhoi mutants by immunofluorescence. Celsr1 appears to be restricted to the neuroepithelial cell plasma membrane in wild-type embryos preceding initiation of neural tube closure (Figure 12H), and this distribution was observed in chuzhoi homozygous mutant embryos (Figure 12I). Vangl2 protein in wild-type embryos was also localised predominantly in the plasma membrane of the neuroepithelial cells, with an apparent enrichment along apical membranes (Figure 12J). In a number of embryos, we observed an apparent decrease in Vangl2 protein localisation at the apical membrane (Figure 12K), but this difference was not always reproducible and other embryos appeared normal. Scrib localisation appeared similar in wild-type and chuzhoi mutants (data not shown). On balance, while other subtle defects may have remained undetected, these data suggest that the interaction between chuzhoi, Crsh and Lp is mediated neither by changes in levels of protein expression nor by alterations in protein localisation.


Chuzhoi is a new mouse mutant revealing further evidence for function of the PCP pathway in neural tube closure

Investigating the function of any gene is greatly helped by the existence of multiple mutant alleles of that gene. ENU treatment of mice has proven to be a powerful method for generating new mutations and, since ENU introduces random, single nucleotide changes, it provides a diverse array of alleles, including nonsense, missense and splice site mutations. These alleles encode a rich resource of genetic defects, often with a spectrum of phenotypic abnormalities that range from complete nulls, through hypomorphs to gain-of-function alleles. An allelic series of genetic mutants is a valuable resource in elucidating the function of the protein.

Chuzhoi is a novel mouse mutant that arose from an ENU screen. We have demonstrated that chuzhoi maps to the central region of Chromosome 17, and show that chuzhoi mutants contain a splice site mutation that results in a three amino acid insertion in the extracellular domain of Ptk7. While we have not fully excluded the possibility that other mutations in the critical interval might contribute to the chuzhoi phenotype, we have a number of pieces of evidence to strongly support Ptk7 as a very good candidate for the chuzhoi mutation. The chuzhoi mutant exhibits a number of phenotypes that were previously reported for a gene trap allele of Ptk7 [21] including craniorachischisis, abdominal closure defects and eyelid closure defects. In addition, we document abnormal planar cell polarity in the inner ear; both the misorientation of OHC3 cells, and the disrupted arrangement of the rows of OHC and IHC are highly reminiscent of that reported for the Ptk7 gene trap allele [21]. Moreover, we have found a disruption in Ptk7 protein expression in the chuzhoi mutants.

Chuzhoi mutants exhibit the severe neural tube defect of craniorachischisis, owing to failure to initiate neural tube closure. Notably, almost all other mutants with this defect affect genes involved in the PCP pathway. These include those that affect the "core" PCP genes, including Vangl2, Vangl1/Vangl2, Celsr1, Frizzled3/Frizzled6, Dishevelled1/Dishevelled2 and Dishevelled2/Dishevelled3 [5-12]. Disruption of Wnt5a can also lead to craniorachischisis, and Wnt5a genetically interacts with Vangl2 mutants [35]. Other mutants with craniorachischisis are not "core" PCP genes, but genetically interact with the PCP pathway, such as Scrib [16,17]and the Sfrp1/Sfrp2/Sfrp5 triple mutants [36,37]. Craniorachischisis occurs following mutation of Sec24b, a protein recently shown to affect membrane localisation of Vangl2 [23,24]. Failure of neural tube closure is seen also in mouse mutants for Smurf1/Smurf2, which affect PCP signalling by interacting with phosphorylated dishevelled and Par6, leading to the localised ubiquitination and degradation of prickle [38]. Zic2/Zic3 double mutants exhibit craniorachischisis though this may be a result of exencephaly and severe spina bifida, rather than a failure of closure 1; genetic interaction between Zic mutants and the PCP pathway has not been assessed [39]. Only a single mouse mutant, chato (Zfp568), demonstrates failure of closure 1, in a PCP-independent manner [40]. However, the phenotype is more severe than observed in other closure 1 mutants, with very short and broad axes, notochord irregularities distinct from those of the PCP mutants, disruption of heart formation and death at around E9.0 [40].

The phenotype of chuzhoi is very similar to that of other PCP mutants and therefore likely indicates a role within the PCP pathway. Indeed, our documentation of polarity defects in the cochlea provide direct evidence that chuzhoi disrupts the PCP signalling pathway. In addition, we have demonstrated a genetic interaction between chuzhoi and mutants in two core PCP genes, Celsr1 and Vangl2. Thus our novel mutant provides additional evidence linking PCP disruption to failure of neural tube closure.

In mutants exhibiting the craniorachischisis phenotype, early embryos display a defect in their morphology, with broadened neural folds, and this defect is thought to preclude neural tube closure by mechanically placing the neural folds too far apart to appose [41]. We show that chuzhoi mutants similarly exhibit a broadened midline defect, with a U-shaped rather than V-shaped ventral midline and broadened domains of Shh and Brachyury expression. The broadened midline defect is thought to arise as a result of disruption of convergent extension, a process first documented in frogs and fish, whereby cell rearrangement and intercalation in the mesoderm and neuroepithelium contributes to narrowing and lengthening of the embryo in a process dependent on the PCP pathway [42,43]. Recent time-lapse live imaging studies have demonstrated convergent extension in mouse embryos, with cell intercalation in the axial mesoderm immediately anterior to the node at E8.5 [44]. Moreover a defect in convergent extension in embryos prior to neurulation has been documented in Vangl2Lp/Lp [27], Sfrp1/Sfrp2/Sfrp5 triple [37] and Par6 mutants [38], while convergent extension defects of the cochlea are observed in Vangl2Lp/Lp, Dishevelled1/Dishevelled2 [45] and Wnt5a mutants [35]. The Ptk7 gene trap allele has recently been shown to have defective convergent extension cell movements in the mesoderm [28]. We demonstrate here that the chuzhoi mutant embryos have a reduced rate of increase of their length-to-width ratio, compared to wild-type littermates, consistent with disruption of convergent extension.

Disruption of heart and lung development in chuzhoi mutants

The chuzhoi mutant exhibits a number of phenotypic similarities to the Ptk7 gene trap allele [21] and, in addition, exhibits abnormalities in heart and lung development not reported for the Ptk7 gene trap allele. Chuzhoi mutants exhibit defects in the heart including double outlet right ventricle (DORV) with a ventricular septal defect (VSD), or parallel arterial trunks. Several other PCP mutants exhibit cardiovascular defects, though the range of defects is only partially overlapping. Vangl2Lp/Lp and Celsr1Crsh/Crsh mutants exhibit DORV and VSD as fully penetrant defects [30,46] while ScribCrc/Crc mutants exhibit DORV in only a proportion (24%) of embryos examined [47]. DORV is observed in some dishevelled mutants, including 38% of Dvl2-/-, 36% of Dvl3-/-, 38% of Dvl1-/-;Dvl2-/- and 32% of Dlv2+/-;Dvl3+/- mutants, while others exhibit persistent truncus arterious, in which the outflow tract fails to divide into the aorta and pulmonary artery [9,11]. The common defects suggest the chuzhoi mutation may affect PCP-dependent processes in heart development. However, chuzhoi mutants also exhibit dilation of the pulmonary artery and pulmonary vein, a phenotype not reported in other PCP mutants, suggesting that Ptk7 has additional, perhaps PCP-independent, roles in development. It is notable that disruption of off-track (the chick Ptk7 homologue) causes abnormal heart development [48], supporting our hypothesis that the chuzhoi phenotype is caused by disruption of Ptk7.

The origin of the cardiovascular defects in chuzhoi mutants remains to be experimentally determined. Abnormal positioning of the great arteries, including DORV, is thought to result from defects in outflow tract (OFT) rotation during heart development [49]. Evidence for abnormal OFT rotation is supported by the observation of parallel arterial trunks in chuzhoi mutants. In Vangl2Lp/Lp, the cardiac alignment defects are attributed in part to abnormalities in cardiac looping [30], as well as defects in myocardialization of the outflow tract cushions [46], which may also affect OFT rotation. Defects in neural crest cell contribution can affect OFT rotation [50] and, indeed, neural crest cells may provide the initiating signal for myocardialization [51]. However, although Ptk7 is important for neural crest cell migration in Xenopus [22], we found that chuzhoi mutants demonstrate only minor abnormalities in neural crest cell distribution in the cranial or spinal regions, and these are likely secondary to the abnormal embryo morphology. In contrast, chuzhoi mutants have incomplete embryonic turning, and this defect may cause abnormal looping of the developing heart, with consequential effects on OFT rotation and alignment. Indeed, in chick embryos, siRNA disruption of off-track causes failure of bending of the heart loop and abnormal expansion of the ventricular region [48].

Chuzhoi genetically interacts with Vangl2Lp and Celsr1Crsh but not with ScribCrc

The genetic experiments reported here demonstrate an interaction between chuzhoi and Vangl2Lp, and between chuzhoi and Celsr1Crsh. The difference in the penetrance of phenotypes in the two crosses may be partly attributable to genetic background effects, since Celsr1Crsh is congenic on BALB/c, whereas Vangl2Lp and chuzhoi are congenic on C3H/HeH. Background variation may also account, in part, for the different results obtained for the cross between Ptk7 gene trap allele and Vangl2Lp/+ reported previously [21] and the cross between chuzhoi and Vangl2Lp/+ reported here. The former cross involved a genetic background of approximately 75% C57BL/6, 25% C3H/He in doubly heterozygous individuals and 94% exhibited spina bifida [21]. In contrast, the genetic background of our intercross was almost 100% C3H/HeH. A high proportion of C57BL/6 in the embryos may increase the severity and penetrance of the mutant phenotype; indeed, this is supported by the observation of spina bifida in single loop-tail heterozygotes [21]. An increased penetrance of the NTD phenotype on C57BL/6 compared to C3H backgrounds is seen in other mutants, including vacuolated lens [52] and circletail (our unpublished data).

The evidence of a genetic interaction between chuzhoi and both Vangl2Lp and Celsr1Crsh indicate that chuzhoi can influence the PCP pathway, although the molecular mechanism of this interaction remains unclear. We have demonstrated that the expression level and membrane localization of Ptk7 are not detectably disrupted by mutation of either Vangl2 or Celsr1 and, similarly, Celsr1 expression and localization appear unaltered in chuzhoi mutants. We have some data to suggest that Vangl2 localisation may be subtly altered in chuzhoi mutants, with a reduction in protein at the apical membrane. Xenopus PTK7 has been shown to localize dishevelled to the plasma membrane, by forming a complex with dishevelled and frizzled7 [22]. It is possible that mammalian Ptk7 might act in the PCP pathway in a similar way, perhaps forming a complex involving Dishevelled, Frizzled, Vangl2, and Celsr1 [15,18,19,53] although detailed biochemical studies are required to confirm this hypothesis. However, disruption of Ptk7 does not alter Dvl2 localisation [28]. Moreover, yeast 2-hybrid experiments with the intracellular domain of mouse Ptk7 as bait against three different libraries isolated neither dishevelled nor frizzled, nor other members of the PCP pathway (data not shown). Further experiments are required to ascertain the precise molecular function of mammalian Ptk7.

We did not detect a genetic interaction between ScribCrc and chuzhoi. While we cannot fully exclude genetic background effects, since both ScribCrc and chuzhoi are congenic on C3H/HeH (similar to loop-tail), we believe that genetic background does not play a large contribution to the absence of mutant phenotype in the Scrib/chuzhoi double heterozygotes. Rather, we suggest that the absence of an observed genetic interaction between ScribCrc and chuzhoi implies that Scrib and Ptk7 may affect the PCP signalling pathway through distinct mechanisms.

A number of mutants demonstrate a trans-heterozygous interaction with Vangl2Lp mice, and this is commonly used as evidence for a function within the PCP pathway. The Vangl2Lp mutation is semi-dominant, and Vangl2Lp/+ mice exhibit a number of disorders including delayed closure of the neural tube [54]. This delay means that Vangl2Lp/+ embryos are more sensitive than wild-type strains to embryonic conditions, so that sub-optimal environmental or genetic conditions that alone have no observable effect, may cause an NTD phenotype when crossed to Vangl2Lp/+. It is possible, therefore, that apparent genetic interactions can occur as a result of non-specific effects on embryonic conditions, rather than from a molecular pathway intersection. In this regard, it will be important to ascertain additional (molecular) data to confirm interaction specificity.

Molecular function of Ptk7 protein

Ptk7 is similar to the receptor protein-tyrosine kinase family of proteins, with seven extracellular immunoglobulin-like domains, a single transmembrane motif and an intracellular kinase homology domain. However, the kinase homology domain lacks the DFG triplet that is necessary for the chelation of Mg2+ during phosphotransfer and required for kinase activity [34,55,56]. Ptk7 is therefore thought to encode a pseudokinase, lacking catalytic function. Although other proteins lacking the DFG motif have been found to have kinase activity through the use of an alternative motif [57], experimental evidence confirms that mammalian Ptk7 lacks kinase activity and is not phosphorylated in cell culture [34,55]. Ptk7 orthologues in Hydra (Lemon) and chicken (KLG) also lack kinase activity [58,59]. In contrast, the Drosophila homologue of Ptk7 (Off-track, Otk, previously named Dtrk), mediates calcium-dependent homophilic binding, and is phosphorylated on tyrosine residues in cultured cells [60]. Ptk7 has been proposed to be part of an unusual receptor tyrosine kinase signalling mechanism involving transmembrane domain-mediated interactions rather than kinase activity [58], or to mediate signal attenuation [59]. The transmembrane domains of the Ptk7 family are unusually highly conserved, across evolution, and this has been argued to support an important role for this domain [61]. Notably, the kinase-like domain of Xenopus PTK7 is required for the physical interaction of PTK7 with dishevelled [22].

Ptk7 protein exists as at least two isoforms in mouse

Western blotting of mouse Ptk7 detects two isoforms, of approximately 100 and 140 kDa, using an anti-Ptk7 rabbit polyclonal antibody raised against the extracellular domain of Ptk7 [21]. Although human PTK7 encodes five alternatively spliced variants [62], there is no evidence for alternative splicing of mouse Ptk7. An alternative hypothesis is that Ptk7 undergoes protein cleavage. Intriguingly, generation of the extracellular domain of human PTK7 as a soluble fusion protein gives rise to a band of approximately 100 kDa [63], similar in size to the lower band observed endogenously and raising the possibility of juxtamembrane cleavage of Ptk7. Juxtamembrane cleavage of other type I transmembrane proteins commonly involves ADAM proteases [64-66], but this ectodomain cleavage event usually results in the production of a soluble factor [67,68]. In contrast, the smaller isoform of Ptk7 remains within the membrane fraction of cells, indicating that this putatively cleaved isoform is not freely soluble but remains either integral to the membrane or closely associated with membrane proteins. Comprehensive biochemical experiments are required to elucidate the precise basis of the two isoforms observed by Western blotting, and to investigate the possible existence of an intracellular fragment following cleavage.

Regardless of the precise mechanism of formation of the lower molecular weight isoform, it is intriguing that chuzhoi mutants reveal decreased abundance of this smaller isoform on Western blots. Since the insertional mutation in chuzhoi occurs between the fifth and sixth immunoglobulin domains, this cannot directly disrupt a juxtamembrane cleavage site, although it may inhibit cleavage indirectly, for example, by protein misfolding. Alternatively, the chuzhoi mutation may result in reduced stability of the smaller isoform. The reduced abundance of the smaller isoform in chuzhoi raises the possibility that this may be the biologically active moeity. However, the relative abundance of the smaller isoform is much reduced at earlier embryonic stages, including at the onset of neurulation, arguing against this hypothesis. An alternative suggestion is that the insertion in chuzhoi disrupts function of the full length Ptk7 protein through protein misfolding. Further biochemical studies on the protein function may help to distinguish between these possibilities.


Our results with a new mouse mutant provide additional evidence that disruption of the planar cell polarity signalling pathway causes defects in neural tube, heart and lung development. This mutant provides a new genetic tool to help investigate the function of the PCP pathway and the precise molecular role of the likely candidate gene product, Ptk7 protein.


Mice and embryos

Chuzhoi was identified during a three-generation (G3) recessive mutagenesis screen [25], in which BALB/c males were injected with ENU and outcrossed to C3H/HeH. Male F1 offspring were mated to C3H/HeH and F2 females backcrossed to their father. G3 embryos were examined at E13.5 for developmental abnormalities. Affected fetuses were used for genetic mapping with a 55-marker genome-wide SNP panel (sequences available on request), and additional microsatellite markers. The mutant line was maintained by backcrossing to C3H/HeH and, following identification of the mutation in Ptk7, genotyped for this mutation, by pyrosequencing. Mice heterozygous for Vangl2Lp [6] and ScribCrc [16] mutations were maintained on C3H/HeH, while the Celsr1Crsh mutant [7] was maintained on BALB/c. Animals were maintained following guidelines of the Medical Research Council and in accordance with the Animals (Scientific Procedures) Act, 1986.

Mice were maintained routinely on a 12 h light-dark cycle (dark from 19:00 to 07:00 h). Embryos were generated by overnight matings, with the day of finding a copulation plug designated as embryonic day (E) 0.5. Some mice were maintained on a reverse light-dark cycle (dark from 10:00 to 22:00 h), and litters from these animals were designated as E1.0 on the day of plugging. Embryos were dissected in PBS with 10% newborn calf serum and processed according to downstream application.



RNA was extracted from E8.5 embryos using GenElute (Sigma) and reverse transcribed with MMLV-RT (Invitrogen). DNA and cDNA were amplified with intron or exon-specific Ptk7 primers (sequences available on request), purified using Qiaquick (Qiagen) then sequenced with BigDye reagent (ABI) and ABI3700.

Histology and in situ hybridisation

Histology and skeletal preperations used standard protocols. Wholemount in situ hybridisation was performed essentially as described [69], using digoxigenin-labelled riboprobes for Ptk7, Shh, Brachyury, Sox10 and Sox9. To generate a probe for Ptk7, an 828 bp fragment corresponding to region 981-1808 bp of the cDNA was amplified using primers F (5'-TGGTGATGAGGAACGAGTCA) and R (5'- GTGGCCCTGGTACACAGTTG) and cloned into pGEM-T (Promega). At least three embryos of each genotype were analysed with each probe and processed under identical conditions. Embryos were photographed on a Leica MZ16 stereomicroscope and vibratome sectioned at 35-50 μm as described [70]. Slide in situ hybridisation was performed using 12 μm wax sections as described elsewhere [6], with digoxigenin-labelled riboprobes for Ptk7.

Measurement of length-width ratios

For length and width measurements, E8.5 embryos (3-7 somites) with embryonic membranes dissected off were flat-mounted on a microscope slide in a drop of PBS/10% fetal calf serum. Embryos were flattened slightly under a coverslip, supported with dabs of silicon grease to prevent the embryos from being squashed. Measurements were taken as the length of the embryo along the axial midline, from the boundary with the allantois posteriorly to the ventral midline of the open cranial neural folds anteriorly (Figure (Figure3A).3A). The width of the embryo was measured as the extent of the lateral plate mesoderm, at the level of the third somite in each case (Figure (Figure3A3A).

Protein extraction and Western blots

Total cell lysates were generated in RIPA buffer (PBS with 1% Nonidet P40, 0.5% sodium deoxycholate, 0.1% SDS). Membrane fractions were generated using the Proteoextract Native Membrane kit (Calbiochem), which separates the membrane and membrane-associated proteins, including plasma membrane, endoplasmic reticulum and Golgi membrane proteins, from non-membrane proteins. Proteins were quantitated using the DC assay (Biorad). Westerns used 1-5 μg protein per lane on 7% or 3-8% Tris-Acetate NuPAGE gels with SeeBluePlus2 or HiMark ladders (Invitrogen). Proteins were transferred onto Hybond ECL (GE Healthcare) and detected with antibodies against Ptk7 [21] (1:15000), Celsr1 [71] (1:3000), Scrib [72] (1:500; gift from P. Humbert), β-tubulin (1:5000; Santa Cruz sc-9104), or fatty acid synthase (1:1000; sc-55580) with HRP-conjugated secondary antibodies (1:12,000; DAKO) and detection with ECL Advance (GE Healthcare). Bands were quantitated from exposed films following ECL, using the Geliance 600 Imaging System (Perkin-Elmer). Band intensity was determined using areas of equal size, with background subtraction, and normalised against the values obtained for β-tubulin immunostaining for each lane, to allow for loading differences. Data for the intensity of upper and lower bands were compared across genotypes, using the Upper band value for the wild-type as the reference value (set arbitrarily at 1). Quantitation values are means obtained from the duplicate samples shown in Figure 10G, and the experiment was repeated 3 times with independent samples, yielding similar results.


Immunofluorescence on 10 μm cryosections was performed on fresh-frozen material; sections were fixed for 10 minutes with either 4% paraformaldehyde or ice-cold methanol, blocked with 10% newborn calf serum and immunostained with antibodies against Scrib (1:200; Santa Cruz sc-28737), Vangl2 (1:50; sc-46561), ZO-2 (1:50; sc-8148), Ptk7 [21] (1:5000), Celsr1 [71] (1:1000) and phalloidin (250 ng/ml; Invitrogen A12381). Cell proliferation rates were determined by staining with antibody against phospho-Histone H3 (1:250 pHH3, Upstate Cell Signaling). Primary antibody staining was detected with appropriate secondary antibodies conjugated with AlexaFluor-488 or AlexaFluor-594 (1:250 dilution; Invitrogen), mounted in Vectashield with DAPI (Vector Laboratories) and imaged with a Zeiss Axiophot microscope. Quantitation of proliferation rates was performed by counting pHH3+ cells and total (DAPI+) cells within the neuroepithelium of E8.5 (4-6 somites) embryos; the mitotic index was calculated as the average from 11 sections from each of three embryos of each genotype, with analysis from the somitic region of the embryo. Immunostaining of the sensory hair cells was performed as described [21].

Authors' contributions

AP identified the mutation, performed expression analysis, conducted phenotyping studies and participated in writing the manuscript; CD performed Western blotting and participated in writing the manuscript; VP contributed to embryo phenotyping and participated in writing the manuscript; AE performed the ENU screen that identified the chuzhoi mutant; CF supplied Celsr1 antibody and provided advice with Celsr1 analysis; ZL conducted initial genetic mapping studies; SW enabled genetic interaction studies; XL performed the inner ear immunostaining and participated in writing the manuscript; DN coordinated the ENU screen and participated in writing the manuscript; CHD performed the analysis of lung defects and participated in writing the manuscript; DJH performed the analysis of cardiovascular defects and participated in writing the manuscript; JNM conceived of the study, performed initial phenotyping and wrote the manuscript. All authors read and approved the final manuscript.


We are grateful to Patrick Humbert (Peter MacCallum Cancer Institute, Melbourne) for anti-Scrib antibody. We thank Ben Reeve and the Histology core facility for technical assistance, staff of the MRC Mary Lyon Centre for first class animal husbandry and colony maintenance, and Andy Greenfield for helpful comments on the manuscript. This work was funded by the Medical Research Council with a Career Development Award (to JNM) and Senior Fellowship (G0501680 to DPN).


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