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Logo of nihpaAbout Author manuscriptsSubmit a manuscriptHHS Public Access; Author Manuscript; Accepted for publication in peer reviewed journal;
Am J Biomed Sci. Author manuscript; available in PMC 2010 April 19.
Published in final edited form as:
Am J Biomed Sci. 2009 January 1; 1(1): 1–11.
doi:  10.5099/aj090100001
PMCID: PMC2856090

Analysis of Recombinant CD24 Glycans by MALDI-TOF-MS Reveals Prevalence of Sialyl-T Antigen


CD24 is a glycosyl-phosphatidyl-inositol linked glycoprotein expressed in a broad range of cell types and is heavily glycosylated. It has been found to be over expressed in cancers and tumors and is also a costimulatory molecule. Therefore, this study was carried out to define the structures of the carbohydrates associated with the CD24 recombinant protein. The CD24 glycoprotein’s oligosaccharides were released by chemical and enzymatic means prior to being analyzed by MALDI-TOF-MS. The results obtained showed that CD24 is both N- and O-glycosylated. The major oligosaccharides were found to be Neu5Acα-2,3/6Galβ-1,3GalNAc, NeuAc2Gal β-1,3GalNAc1 (O-glycans), GalNAc2GlcNAc2Man3Fuc1, Gal1GalNAc2GlcNAc2Man3Fuc1, and Gal2GalNAc2GlcNAc2Man3Fuc1 (N-glycans). The results showed that Neu5Acα-2,3/6Galβ-1,3GalNAc (sialyl-tumor antigen, sT), a cancer-associated carbohydrate, was the most abundant glycan associated with CD24. This result raised the intriguing possibility that CD24 may be a major carrier of the sialyl-T abundantly found in cancer cells.

Keywords: CD24, Glycans, MALDI-TOF-MS, T antigen

1.0 Introduction

CD24 is a glycosyl-phosphatidyl-inositol (GPI)-anchored glycoprotein with widespread expression in both hematopoietic and non-hematopoietic cells. The protein is composed of 27-35 amino acids with nearly half of the amino acids being serine and threonine [1, 2]. Both serine and threonine are potential sites for O-glycosylation and asparagine gives potential for N-glycosylation. The human form of CD24 has an unusual structure with the core having only 31 amino acids [3]. The CD24 molecule is expressed in developing or regenerating tissue and in pre-B-cells, granulocytes, keratinocytes, and renal tubular epithelial cells [1, 4, 5]. CD24 is over-expressed in both hematological malignancies and a variety of solid tumors such as gastric, renal, nasopharyngeal, hepatocellular, colonic, and small cell lung carcinomas [6, 7].

The CD24 gene has been implicated in immunity, cancer and autoimmune diseases. Thus, expressing of CD24 in non-professional antigen-presenting cells, such as activated B cells [8, 9], astrocytes and oligodendritic cells [10, 11] conveys a potent costimulatory activity. In T cells, CD24 promotes homeostatic proliferation [12]. In contrast, CD24 expression in dendritic cells is a negative regulator that modulates the pace of homeostatic proliferation [13], a process that is important for development of autoimmune diseases and cancer immunotherapy [14, 15]. Expression of CD24 in pre-B cells on the other hand, modulates fibronectin/VLA-4:VCAM-1 interactions [16, 17]. Outside the immune system, CD24 expressed in the central nervous system (CNS) has been shown to inhibit neurite growth [18]. In humans, CD24 polymorphism controls risk and progression of autoimmune diseases, such as multiple sclerosis [19]. Concerning cancerous cells, CD24 has been found to be prevalent on many tumors and carcinomas [2022]. Carbohydrates of CD24 on tumor cells have been shown to play an important role in metastasis by interaction with P-selectin [2325]. The interaction of P-selectin and sialylLewisX carbohydrates is essential for CD24-mediated rolling of tumor cells. P-selectin is an adhesion receptor on platelets and activated endothelial cells. This process is necessary for the cancer cells to reach outside of the vascular system and facilitate metastasis [5]. CD24 expression is a prognostic marker in breast cancer, ovarian cancer, and prostate cancer [4, 5, 26].

Based on the variation in molecular weight, it has been suggested that CD24 is differentially glycosylated in different cell types. Indeed, about 50% of the 27-31 amino acids in mature CD24 protein are potential anchors for either O- or N-linked oligosaccharides [2, 27]. The diversity of CD24 glycosylation may be partly responsible for the wide range of functions ascribed to CD24 by genetic and immunological analyses. The N-glycan analysis of CD24 from different cell lines (lymphoblastoma, neuroblastoma and astrocystoma) and brain homogenates from mouse and human have been analyzed by Ohl etal [3]. The study showed the presence of fucosylated and sialylated complex and hybrid N-glycans. However, the O-glycan composition of CD24 has not been characterized. Here we used MALDI-TOF-MS to analyze both O- and N-linked oligosaccharides released from the recombinant CD24 protein by chemical and enzymatic methods. Our data demonstrated that the overwhelming majority of the oligosaccharides are Neu5Ac Galβ-1,3GalNAc, namely sialyl-T. These data, together with frequent elevation of CD24 protein in cancer tissues, raised the intriguing possibility that CD24 protein is a major carrier of the sialyl-T on cancer tissues.

2 Methods and Materials

2.1 Materials

The human CD24IgG1 protein, comprising the first 30 amino acid of human CD24 protein (SETTTGTSSNSSQSTSNSGLAPNPTNATTK) and the IgG1 Fc, was produced in Chinese hamster ovary (CHO) cells and purified by ion-exchange and protein A-based affinity chromatography to homogeneity. All chemicals and reagents unless otherwise stated were obtained from Sigma-Aldrich (St. Louis, MO, USA). HPLC grade water, acetonitrile, methanol and n-propanol were purchased from Burdick and Johnson (Muskegon, MI, USA). 2, 5 dihydroxybenzoic acid and acetic acid were purchased from Acros Organics (New Jersey, USA).

2.2 Chemical cleavage by β-elimination

Since IgG contains no O-linked oligosaccharides [28], the CD24IgG1 was freeze dried and the O-glycans released by the ammonia based β-elimination method introduced by Huang et al. [29]. In this study, ice-cold ethanol was added to precipitate the peptides after boric acid removal. Centrifugation was carried out and the supernatant which contained the sugars decanted for further analysis.

The O-glycans that were analyzed by tandem mass spectrometry were released by the β-elimination method according to Kotani and coworkers [30].

2.3 Cleavage of CD24 from CD24IgG1 with papain

Since the IgG is known to contain N-glycans, we cleaved the Fc fragment off in order to focus on the N-glycans from the CD24 glycoprotein. A 20 mg/mL solution of CD24IgG1 in PBS buffer was prepared followed by addition of 0.1 mg/mL papain in digestion solution [31]. This mixture was incubated for 5 h in a circulating water bath set at 37 °C. The reaction was quenched by the addition of 400 μL 0.3 M iodoacetamide. This solution (3 mL) was dialyzed overnight at 4 °C against a 3500 MWCO dialysis membrane and freeze dried.

2.4 Separation of the CD24 from the IgG1 components

The separation of the CD24 from the fragmented CD24IgG1 was carried out by using a Protein A-Sepharose from Staphylococcus aureus affinity column based on the manufacturer’s protocol. The column was prepared by mixing 0.5 g of Protein A-Sepharose with 2.5 mL buffer A (prepared by adjusting 0.02 M NaH2 PO4 + 0.15 M NaCl to pH 8.0) and allowing to stand for about 45 min to swell. The swollen resin was mixed with buffer A (1:1, v/v) and poured into the column. The solvent was allowed to drain while the resin settled. This was later washed with 20 column volumes (CVs) of buffer A. After introducing the sample into the column, 10 CVs of buffer A was used to elute the CD24 components from the column. The Fc component and the unfragmented CD24IgG1 was eluted with 3 CVs of buffer B (prepared by mixing 25.7 mL 0.2M Na2H PO4, 24.3 mL 0.1 M citric acid and 50.0 mL deionized water). SDS-PAGE was used to test the purity of collected fractions and compared with the unfragmented CD24IgG1 and the fragmented CD24IgG1.

2.5 CD24 treatment with PNGase F

CD24 was treated with PNGase F (Sigma-Aldrich) according to the manufacturer protocol. In the procedure, 1.0 mg of the CD24 obtained after papain cleavage and purification was dissolved in 900 μL of 20 mM ammonium bicarbonate pH 8.0 and to this solution 100 μL of denaturalization solution was added (0.2% SDS containing 100 mM 2-mercaptoethanol). The solution was placed for 10 minutes in boiling water to denature the glycoprotein. The solution was allowed to cool and 10 U of PNGase F added to this reaction mixture and incubated at 37 °C for 20 h. Then 10 μL was taken after the incubation to monitor the cleavage of the N-glycans with SDS-PAGE.

The reaction mixture was first freeze dried and then desalted and deproteinized using a non-porous graphitized carbon carbograph column (Alltech, Deerfield, IL, USA) [32]. The carbograph column was washed with three CVs of 80% acetonitrile in water (v/v) with 0.1% (v/v) trifluoroacetic acid, followed by three CVs of deionized water. The sample was dissolved in a small amount of water and introduced into the column. The salts and buffer were eluted with 2 mL of ultra-pure water and neutral N-glycans were recovered with 2 mL of 25% (v/v) acetonitrile in ultrapure water. Acidic N-glycans were eluted with 2 mL of 25% (v/v) acetonitrile in water with 0.05% (v/v) trifluoroacetic acid. The collected eluates were freeze dried and stored at −20°C for mass spectrometry analysis.

2.6 Permethylation of the glycans from CD24

The dried sample, typically 50 μg, was dissolved in 50 μL DMSO with a trace of deionized water [33]. To this mixture 22 μL methyl iodide was added and the sample immediately placed in a spin column packed with sodium hydroxide that had been cleaned with DMSO. The sample was recovered by centrifuging at 1000 rpm for 1 min, and washed again with 100 μL DMSO. The permethylated N-glycans were recovered by extracting with 3×100 μL chloroform. The chloroform fractions were combined and washed with 6×200 μL DI water. The glycans were dried using a CentriVap® and stored at −20 °C for analysis.


A Bruker Esquire – LC/MS (Brucker Daltonics, MA, USA) was used for tandem mass spectrometry and MALDI-TOF-MS was acquired with a Kratos Axima-CFR instrument (Shimadzu, MA, USA). For ESI, samples were dissolved in 50% methanol containing 1% acetic acid and directly infused into the mass spectrometer. The nebulizing gas was set at 10 psi; the dry gas at 6 L/min; and the dry temperature at 250 °C.

MALDI-TOF mass spectrometry was performed by use of a Kratos Axima-CFR instrument in the positive reflectron mode. The instrument was equipped with a pulsed nitrogen laser set at 337 nm. The acceleration voltage was 20 kV. The samples were normally dissolved in a 1:1 methanol/water solution containing 20 mM sodium acetate. A 10 mg/mL matrix was prepared by dissolving 2, 5-dihydroxy benzoic acid in the above solvent without the sodium acetate [33]. The sample and the matrix were mixed 1:1 before spotting on the plate and air dried.

3.0 Results and discussion

3.1 Cleavage of the CD24 from CD24IgG1 with papain and its purification

CD24IgG1 consists of the extracellular domain of the CD24 protein and the Fc fragment of IgG1. As shown in Figure 1a, the purified CD24 protein is a covalent dimer. Isoelectrofocusing revealed a complex pattern of the fusion protein, which is consistent with the extensive and diverse glycosylation of the fusion protein. In order to focus on CD24 portion, the CD24IgG1 was cleaved with crystalline papain at the hinge region and its fragmentation monitored with SDS-PAGE. Since no reducing reagent is present in the digestion reaction, papain yield Fc monomer and CD24 dimer [34]. The fragment components were purified with a protein A Sepharose column in which the Fc region of IgG1 and the unfragmented CD24IgG1 are bound while the CD24 fragment is not. The purification was also monitored with SDS-PAGE and the gel is shown in Figure 1b. The band for the CD24 glycoprotein was relatively pure at an approximate MW of 45 kDa on the non reducing SDS-PAGE gel. This CD24 dimer was used for analysis of N-glycans.

Fig. 1
(a) Polyacrylamide gel electrophoresis (PAGE) of the purified fused CD24 protein carried out under either non-reducing or reducing conditions. In each analysis ~2 and 5ug was loaded per well in quadruplicate and the gels were stained using Colloidal Blue ...

3.2 MALDI-TOF-MS of the released O-glycans

The released O-glycans from CD24IgG were analyzed with MALDI-TOF-MS and the scan performed in the positive mode. Figure 2 shows the mass spectra of O- and N-glycans released from the CD24 glycoprotein. This means that the ammonia-based β-elimination method not only releases the O-glycans, but also N-glycans [29].

Fig. 2
MALDI-TOF mass spectrum for CD24 O-and N-glycans released by the ammonia based β-elimination method and permethylated. An external file that holds a picture, illustration, etc.
Object name is nihms191419ig1.jpg-Fucose (Fuc), An external file that holds a picture, illustration, etc.
Object name is nihms191419ig2.jpg Galactose (Gal), An external file that holds a picture, illustration, etc.
Object name is nihms191419ig3.jpg-Mannose (Man), An external file that holds a picture, illustration, etc.
Object name is nihms191419ig4.jpg-N-AcetylGalactosamine (GalNAc), An external file that holds a picture, illustration, etc.
Object name is nihms191419ig5.jpg-N-AcetylGlucosamine (GlcNAc), An external file that holds a picture, illustration, etc.
Object name is nihms191419ig6.jpg-N-5 Acetylneuraminic ...

3.3 Tandem mass spectrometry of the released O-glycans

The O-oligosaccharides released by the β-elimination chemical method were analyzed with ES-ion trap MS before permethylation. The nomenclature used for the fragmentation of the glycans was the one introduced by Domon and Costello [35]. In the nomenclature two types of fragmentation occur; glycosidic cleavage between the sugars (Y and Z) and cross ring cleavage (X). The scheme of the fragmentation is shown in Figure 3.

Fig. 3
Nomenclature for the fragmentation of carbohydrates.

The fragmentation provides information on the sugar sequence of the carbohydrate. In the results, the following peaks were positively identified. The peak at m/z 675.4 (Figure 4a) in the negative scan mode is a glycan whose structure has NeuAc1Hex1HexNAc1. The CID fragmentation MS2 spectra (Figure 4b) revealed m/z ion 290 (B1) which was due to the loss of N-acetyl neuraminic acid and at 384 (Y2), Hex1HexNAc1. This fragment represents the core 1 of the O-glycans, Galβ-1,3GalNAc. Therefore, this peak’s structure is proposed as Neu5Acα-2,3/6Galβ-1,3GalNAc.

Fig. 4
a) Negative ion spectra of O-glycans released from CD24 by β-elimination and b) the negative scan mode fragmentation spectra of the m/z 675.4 ion. The sample was dissolved in 25 % methanol in 1% acetic acid.

The structures of the released O- and N-glycans from CD24 can be proposed because the glycosyltransferases and glycosidases in the ER and the Golgi apparatus have been identified. This limits the number of possible oligosaccharide structures to a small number. Table 1 summarizes the proposed structures of the O-glycans identified from the CD24 glycoprotein.

Table I
O-glycans released from CD24 by a β-elimination with subsequent permethylation

The glycan Neu5Acα-2,3/6Galβ-1,3GalNAc as seen in the mass spectra in Figure 2 was the most abundant oligosaccharide from CD24 with the other O-glycan from the glycoprotein being NeuAc2Gal1GalNAc1. The O-glycan identified as Neu5Acα-2,3/6Galβ-1,3GalNAc is also called sialyl-T antigen. We report for the first time the presence of sialyl-T antigen in CD24. Mucin-like carbohydrates which include sialyl-T antigen, Tn, sialyl-Tn, and T antigen have been found to be expressed in some benign and malignant cancer cells. Moreover, sialyl-T and T antigen can be used as biomarkers in progression of several carcinomas [3649]. The antigens have been found to be expressed in gastric carcinomas such as colon cancer [37, 39], breast carcinomas [43, 50], salivary gland carcinomas [38, 4549], cancer of the human cervix [36], pancreatic tumors [42], ovarian tumors [44] and skin tumors [40, 41]. Since many of these cell types also over-express CD24 [2022], it is intriguing that the CD24 over-expression may account for the increased sialyl-T in the cancer cells.

3.4 N-glycans

The CD24 N-glycans that were released with the use of PNGase F were permethylated and analyzed with MALDI-TOF-MS. The mass spectrum of the oligosaccharides obtained is shown in Figure 5. The results showed three major peaks.

Fig. 5
MALDI-TOF mass spectrum for the permethylated N-glycans released by PNGase F from CD24.

The peak at m/z 1836.88 was identified as GalNAc2GlcNAc2Man3Fuc1, at m/z 2041.88 was Gal1GalNAc2GlcNAc2Man3Fuc1 and m/z 2246.0 was Gal2GalNAc2GlcNAc2Man3Fuc1. The N-glycans released here are similar to those released with the ammonia based β-elimination method (Figure 2). The N- glycans that were identified from Figures 2 and and55 are listed in Table 2 with their proposed structures.

Table II
Permethylated N-glycans from CD24 released by PNGase F and ammonia based β-elimination method.

From these results, it can be observed that all the N-glycans obtained are fucosylated. Studies on the binding of selectins to fucosylated carbohydrates have shown that glycoprotein with the Lewisx epitopes act as ligands for various selectins [51, 52]. These data suggest that oligosaccharides on the surface of CD24 can contribute towards the metastasis of tumors in cases where the protein is expressed.

The CD24 glycoprotein has 30 amino acids [2] with a predicted MW of 2929 Da. Since papain cut below the hinge region, another 10 amino acids are likely to be added in the CD24 glycoprotein used in this study. From the CD24 amino acid sequence, it has four potential N-glycosylation sites and a total of sixteen serine and threonine amino acids which are potential O-glycosylation sites. As such, more than 80% of the mass in CD24 are oligosaccharides. Since the oligosaccharide Neu5Acα-2,3/6Galβ-1,3GalNAc, contributes more than half the total amount of the glycans in the CD24 glycoprotein, the glycans must be attached to the several serines and threonines of the glycoprotein.


The authors thank Richard Sessler of The Ohio State University Campus Chemical Instrumentation Center for the assistance in running the Bruker Esquire LC/MS instrument for MSn data. They would also like to thank Hsiu-Fang Lee and Zhuojun Zhao of The Ohio State University College of Pharmacy for assistance in running the MALDI-TOF-MS. This work was supported by NIH CounterACT Program Center Grant U54NS058183 (to P. G. Wang), SBIR Phase II grant from National Institute of Health 5R44NS041692-03 (to OncoImmune), and by a Biomedical Research Technology Transfer Fund from the state of Ohio.


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