4.1. Chemistry
4.1.1. General Methods For general methods, see reference 16 (J. Med. Chem., 2008, 51, 3104). In nearly all of the experimental work-ups, solvents were evaporated under reduced pressure and heat using a rotaevaporator. In each experiment, the progress of the reaction was monitored by TLC and the reaction stopped when TLC showed its completion. In some instances, no NMR signals were observed for active H’s, especially when DMSO-d6 was the solvent of use.
4.1.2. 7-N-Formamido-2-formylquinoline-5,8-dione (20) In a 25 mL two-necked round-bottomed flask, equipped with a stirring bar, a condenser and an argon filled balloon, 7-formamido-2-methylquinoline-5,8-dione
33 (
7, 0.246 g, 1.14 mmol), selenium dioxide (0.202 g, 1.82 mmol) were added to 18 mL of dried distilled 1,4-dioxane and 0.2 mL water and refluxed for 24 h. Solid black selenium metal was allowed to settle and the supernatant was filtered. The filter paper containing selenium was placed in a beaker, 10 mL of dioxane was added, and heated for a few minutes on a steam bath to boiling. The mixture was filtered and the solid was again washed with 15 mL of dichloromethane. The combined filtrates were evaporated and tothe resulting solid, 50 mL of dichloromethane was added and placed in a separatory funnel. The solution was washed with sodium bicarbonate (2 × 50 mL), the organic layer was dried (MgSO
4) and evaporated. The brown yellow solid was dissolved in dichloromethane, and then concentrated to a small volume. Addition of enough
n-hexane gave the yellow solid of pure
5 (78.6 mg, 30%): mp 192–195 °C;
1H NMR (CDCl
3) δ 8.07 (s, 1H), 8.34 (d, 1H,
J = 7.0), 8.60 (s, 1H), 8.64 (d, 1H,
J = 6.6), 8.80 (s, 1H), 10.31 (s, 1H); HRMS
m/e calcd for C
11H
6N
2O
4, 230.032; found, 230.032.
4.1.3. 7-N-(3-Carboxypropionyl)amino-2-formylquinoline-5,8-dione (23) Dione 68 (225.1 mg, 0.781 mmol) was added to 4 mL of dioxane and 0.1 mL of water. To the mixture 167.9 mg (1.5 mmol) of selenium dioxide was added and refluxed with stirring under argon for 11 h. The reaction mixture was filtered hot and the filter cake was returned to the flask and refluxed for 5 min with 5 mL of dioxane and then filtered. This process was repeated once more and the combined filtrates were evaporated to produce 130 mg (55%) of the yellow orange solid 23: mp 225.5 °C (dec); 1H NMR (DMSO-d6) δ 2.50 (m, 2H), 2.88 (m, 2H), 7.8 (s, 1H), 8.28 (d, 1H, J = 8.0), 8.54 (d, 1H, J = 8.0), 10.16 (s, 1H), 10.23 (s, 1H), 12.17 (br s, 1H); HRMS m/e C14H10N2O6, 303.061; found, 303.062.
4.1.4. 7-N-(3-Carboxypropionyl)amino-2-methylquinoline-5,8-dione (68) To a solution of potassium dichromate (1.10 g) in 29 mL of water/glacial acetic acid mixture (13.4 /15.6), 0.51 g (1.3 mmol) of amide 67 was added and the reaction mixture was stirred at rt for 20 h and then extracted with dichloromethane (5 × 50 mL). The combined extracts were dried (MgSO4) and evaporated to give 0.26 g (69%) of the yellow solid 53: mp 144 °C (dec); 1H NMR (DMSO-d6) δ 2.73 (m, 7H), 7.71 (s, 1H), 7.73 (d, 1H, J = 8.3), 8.24 (d, 1H, J = 7.9), 9.98 (s, 1H); HRMS m/e calcd for C14H12N2O5, 288.075; found, 288.077.
4.1.5. 5,7-Bis(3-carboxypropionylamino)-8-hydroxy-2-methylquinoline (67) 5,7-Diamino-8-hydroxy-2-methylquinoline dihydrogen chloride salt
16 (
66, 1 g, 3.81 mmol) was added to stirred solution of sodium acetate (2 g), sodium sulfite (2 g) in 80 mL DMF under argon. A solution of succinic anhydride (3.05 g) in 30 mL DMF was dropwise added and stirred for 18 h at rt. The reaction mixture was filtered, water (3 mL) added to the filtrate and after1 h, 500 mL of dichloromethane was added and kept in the refrigerator for 36 h. The orange red solid was filtered and dried (1.2034 g, 81%): mp 180–180.6 °C;
1H NMR (DMSO-
d6) δ 2.54 (m, 4H), 2.64 (m, 4H), 2.70 (s, 3H), 7.35 (d, 1H,
J = 8.8), 8.06 (s, 1H), 8.18 (d, 1H,
J = 8.8), 9.65 (br s, 1H), 9.98 (br s, 1H); HRMS
m/e calcd for C
18H
16N
3O
5 (M − 2 H
2O + H), 354.109; found, 354.108.
4.1.6. 5-Hydroxytryptophan isoamyl ester (27) 5-Hydroxytryptophan (1.101g, 5 mmol) in 60 mL anhydrous isoamyl alcohol with 10 mL of hydrogen chloride ether solution (1.0 M) was refluxed for 22 h. The reaction mixture was evaporated, the solid salt was mixed with 50 mL of dichloromethane and neutralized with a solution of 14% ammonium hydroxide. The aqueous layer was extracted with EtOAc (3 × 75 mL) and the combined organic extracts were dried (MgSO4) and then evaporated to give 1.28 g (91%) of product 27 as a gel: 1H NMR (DMSO-d6) δ 0.89 (d, 6H, J = 6.2), 1.30 (m, 2H), 1.60 (m, 1H), 2.8 (m, 1H), 2.9 (m, 1H), 4.14 (t, 2H, J = 7.0), 6.55 (s, 1H), 6.75 (m, 1H), 6.95 (m, 1H), 7.10 (d, 1H, J = 8.8), 8.56 (m, 1H), 10.51 (s, 1H); HRMS m/e calcd for C16H22N2O3, 290.163; found, 290.162
4.1.7. Methyl (2RS,3SR)-2-amino-3-[3-(5-hydroxyindolyl)]butanoate (28) In a 500 mL heavy-walled hydrogenation flask equipped with a magnetic stirring bar, a cool solution of trifluroacetic acid (0.96 g, 8.44 mmol) in 145 mL absolute ethanol was placed. To this, powdered benzyloxy nitro ester 71A (1.03 g, 2.81 mmol) was added and the mixture was stirred for 1 h for most of the solid to be dissolved. The magnetic bar was removed and 1.65 g of 10% Pd-C was added. Using a Parr hydrogenator, the mixture was hydrogenated at 40 psi at rt for 21 h, then filtered through a layer of Celite. The filter cake was washed with absolute ethanol (3 × 15 mL) and the filtrate was evaporated to dryness. To the residue, 60 mL ether, 2 mL water, 3 mL 14% ammonium hydroxide were added and the yellow ether layer was separated. The aqueous layer was extracted with ether (5 × 50 mL), then the combined ether extracts were washed with 10% sodium chloride solution (2 × 10 mL), dried (MgSO4) and evaporated to give a solid. The product was redissolved in some ether and evaporated. This process was repeated nine more times and the off-white crystals were dried on a vcuum pump, producing 0.65 g (93%) of 28: mp 88–95 °C (unable to recrystallize 28 further): 1H NMR (CDCl3) δ 1.28 (d, 3H, J = 7.1), 2.15 (br s, 2H), 3.57 (m, 1H), 3.65 (s, 3H), 3.89 ( d, 1H, J = 3.8), 6.74 (m, 1H), 6.98 (d, 1H, J = 2.2), 7.03 (d, 1H, J = 2.5), 7.04 (s, 1H), 7.17 (d, 1H, J = 3.7), 7.95 (br s, 1H); HRMS m/e calcd for C13H16N2O3; 248.115; found, 248.115.
4.1.8. Methyl 3-[3-(5-benzyloxyindolyl)]nitrobutanoate (71) In a 500 mL three-necked round-bottomed flask equipped with a magnetic stirring bar, thermometer, condenser under argon flow was placed indole 70 (1.72 g, 5.54 mmol) in 19.5 mL anhydrous toluene. To this, 0.74 g (7.29 mmol) of freshly distilled triethylamine and 1.0 g (8.42 mmol) of methyl nitroacetate were added. The solution was stirred for 1 h at rt, then heated at 103–105 °C for 9 h and allowed to cool to rt. The solution was extracted with a10% hydrochloric acid solution (3 × 24 mL) followed by water (2 × 13 mL). The organic layer was dried (MgSO4), evaporated and the solid was dried under a vacuum pump at 60 °C overnight (1.98 g, 97%). NMR showed the product to be a mixture of the two stereoisomers 71A and 71B. Careful recrystallization of this product with a mixture of chloroform: hexane (60:40) produced only 71A. An analytical sample was obtained by the recrystallization of the product with 95% ethanol giving 71A as off-white crystals: mp 110–111 °C; 1H NMR (CDCl3) δ 1.53 (d, 3H, J = 3.5), 3.53 (s, 3H), 4.10 (m, 1H), 5.11 (s, 2H), 5.60 (d, 1H, J = 9.0), 6.94 (dd, 1H, J = 9.0, 2.3), 7.05 (dd, 1H, J = 9.0, 2.5), 7.10 (m, 1H), 7.23 (s, 1H), 7.38 (m, 5H), 9.01 (br s, 1H); anal calcd for C20H20N2O5; C, 65.21; H, 5.47; N, 7.60, found; C, 65.04; H, 5.54; N, 7.57; HRMS m/e calcd, 368.141; found, 368.137.
4.1.9. 3-(Isoporopyylaminoethylidene)-5-benzyloxyindole (70).31,34 A 250 mL three-necked round-bottomed flask equipped with a magnetic stirring bar, thermometer, dropping funnel, Claisen head, a condenser with flowing ice-water (using an ice-water circulator) and a calcium chloride drying tube, was immersed in an ice-salt bath. A solution of 5-benzyloxyindole
69 (3.06 g, 0.014 mol) in 50 mL of glacial acetic acid was placed in the flask and then freshly distilled ethylideneisopropylamine
34 (1.31 g, 0.015 mol) in 23 mL anhydrous toluene was dropwise added over an h, maintaining the mixture temperature below 15 °C. The reaction mixture was stirred at this temperature for 30 more min and then kept in the refrigerator for 4 days. With vigorous stirring, the mixture was added to 115 mL of ice-water, 38 mL of ether and then the dark upper ether layer was separated from the aqueous layer. The ether solution was extracted with 1 M potassium hydrogen sulfate (3 × 23 mL) and all the aqueous solutions were combined and basified with 10 M NaOH to pH = 11 or higher, while the solution temperature was kept below 25 °C. Enough base was added to produce an oily layer at the top of the solution. Solidification of the oil was facilitated by the addition of 5 mL methylcyclohexane and scratching the side of the beaker inside the oil. The mixture was allowed to stand in the refrigerator overnight, the resulting solid filtered off, and washed thoroughly with cold water to remove any remaining NaOH. The crystals of
70 were vacuum dried (1.61 g, 38%): mp 132–132.5 °C;
1H NMR (CDCl
3) δ 1.01 (d, 3H,
J = 4.0), 1.04 (d, 3H,
J = 4.0), 1.40 (br s, 1H), 1.46 (d, 3H,
J = 6.6), 2.82 (m, 1H), 4.17 (q, 1H,
J = 6.6), 5.10 (s, 2H), 6.92 (m, 1H), 7.06 (d, 1H,
J = 2.3), 7.22 (s, 2H), 7.37 (m, 5H), 7.89 (br s, 1H); anal calcd for C
20H
24N
2O; C, 77.89; H, 7.84; N, 9.08; found, C, 77.55; H, 7.74; N, 8.86; HRMS
m/e calcd, 308.193; found, 308.189.
4.1.10. Tryptophan 2-hydroxyethanamide (30) In a 100 mL round-bottomed flask equipped with a magnetic stirring bar and an argon filled balloon, a mixture of amide 73 (1.45 g, 3.82 mmol), isopropanol (66 mL), 10 % Pd-C (1.785 g) and dry ammonium formate (1.204 g, 19 mmol) was stirred at rt for 5 h. The reaction mixture was filtered and the filtrate was evaporated to give 30 as a gel (774 mg, 82%); 1H NMR (CDCl3) δ 3.02 (m, 2H), 3.39 (m, 2H), 3.65 (m, 2H), 3.67 (m, 1H) 7.09 (s, 1H), 7.15 (m, 1H), 7.21 (m, 1H), 7.37 (d, 1H, J = 8.0), 7.62 (br s, 1H), 7.83 (d, 1H, J = 7.3), 8.07 (br s, 1H); HRMS m/e calcd for C13H17N3O2, 248.139; found, 248.139.
4.1.11. N-Carbobenzyloxytryptophan 2-hydroxyethanamide (73) In a 25 mL round-bottomed flask equipped with a magnetic stirring bar and an argon filled balloon, 544 mg (1.25 mmol) of succinimide ester 72, and 76.4 mg (1.25 mmol) of 2-hydroxyethanol were added to a mixture of isopropyl alcohol (5.2 mL), chloroform (5.2 mL) and triethylamine (0.8 mL). The reaction mixture was stirred at rt for 23 h and then mixed with 60 mL EtOAc. The organic layer was washed with 10 mL portions of brine, 10% citric acid and water, dried (MgSO4) and then evaporated to give tryptophan hydroxyamide 73 as a gel (464.6 mg, 98%): 1H NMR (CDCl3) δ 2.65 (br s, 2H), 3.40 (m, 1H), 3.48 (m, 1H), 3.67 (s, 2H), 5.10 (m, 5H), 5.43 (m, 1H), 7.08 (m, 1H), 7.15 (m, 1H), 7.29 (m, 7H), 7.55 (m, 1H), 8.41 (br s, 1H); HRMS m/e calcd for C21H24N3O4 (MH+), 382.176; found, 382.176.
4.1.12. Tryptophan 2,3-dihydroxypropanamide (31) In a set up similar to that for 30 and in a 50 mL flask, amide 74 (411 mg, 1 mmol), anhydrous methanol (18 mL), 10% Pd-C (315.3 mg) and anhydrous ammonium formate were mixed and stirred at rt for 30 min. The mixture was filtered and the filtrate evaporated to give 31 as a colorless gel (236 mg, 85%); 1H NMR (DMSO-d6) δ 2.80 (m, 1H), 2.97 (m, 2H), 3.11 (m, 1H), 3.25 (m, 3H), 3.46 (m, 2H), 3.56 (m, 1H), 6.98 (t, 1H, J = 8.1), 7.07 (t, 1H, J = 8.1), 7.17 (s, 1H), 7.34 (d. 1H, J = 8.4), 7.58 (d, 1H, J = 8.4), 8.06 (br s, 1H), 8.29 (s, 1H), 10.89 (br s, 1H); HRMS m/e calcd for C14H20N3O3 (MH+), 278.150; found, 278.150.
4.1.13.N-Carbobenzyloxytryptophan 2,3-dihydroxypropanamide (74) In a similar procedure to that of 73, succinimide ester 72 (1.74 g, 4 mmol), 2,3-dihydroxypropanamine (364 mg, 4 mmol) were added to a mixture of 8 mL of isopropyl alcohol, 16 mL of chloroform and 1.12 mL of triethylamine and stirred at rt for 24 h. To the mixture, 120 mL EtOAc was added and the solution was washed consecutively with 10 mL portions of brine, 10% citric acid and then water. The organic layer was dried (Mg SO4) and evaporated to give 1.66 g (71%) of 74 as a gel: 1H NMR (DMSO-d6) δ 3.10 (m, 5H), 4.25 (m, 2H), 4.50 (m, 1H), 4.72 (m, 1H), 5.17 (m, 4H), 7.00 (m, 2H), 7.13 (s, 1H), 7.35 (m, 5H), 7.60 (m, 1H), 7.98 (br s, 1H), 10.80 (br s, 1H); HRMS m/e calcd for C22H26N3O5 MH+), 412.187; found, 412.187.
4.1.14. Tryptophan N-benzylpiperazine amide (32) In a setup similar to that for 30, and in a 50 mL flask, a mixture of amide 75 (250 mg, 0.5 mmol), ammonium formate (158 mg, 2.5 mmol) and 10% Pd-C (790 mg) were added to 20 mL anhydrous isopropyl alcohol and stirred at rt for 35 min. The reaction mixture was filtered and the filter cake was washed with 20 mL isopropanol. The solid obtained upon the evaporation of the filtrate was suspended in 3 mL of dichloromethane and introduced on top of a 4 in diameter flash chromatography column. The column was first eluted with a mixture of dichloromethane/methanol (10/1) to remove the unreacted starting materials and then the product was eluted with methanol/dichloromethane (5/1). Evaporation of the eluant gave a yellowish white solid that was dried under a vacuum pump at 70–80 °C over 48 h, yielding 95 mg (52%) of the white solid 32: mp 86–87 °C; 1H NMR (DMSO-d6) δ 1.70 (m, 2H), 2.16 (m, 2H), 2.80 (m, 1H), 2.90 (m, 1H), 3.29 (m, 8H), 3.91 (m, 1H), 6.95 (m, 1H), 7.01 (m, 1H), 7.12 (s, 1H), 7.27 (m, 5H), 7.35 (d, 1H, J = 8.0), 7.47 (d, 1H, J = 7.8), 10.85 (s, 1H); HRMS m/e calcd for C22H27N4O (MH+), 363.217; found, 363.218.
4.1.15. N-Carbobenzyloxytryptophan N-benzylpiperazine amide (75) In a similar set up to that for 73, succinimide ester 72 (435 mg, 1 mmol), N-benzylpiperazine (176 mg, ~ 0.18 mL, 1 mmol) were added to 5 mL chloroform, absolute ethanol (3 mL), and 0.14 ml (1 mmol) of triethylamime and was stirred at rt for 48 h. The mixture was evaporated and the solid was dissolved in 90 mL dichloromethane and the solution was washed with 30 mL of water followed by 2 × 30 mL of 10% citric acid. The aqueous layer was extracted with 2 × 10 mL dichloromethane and the combined organic extracts were washed with 30 mL of 1 M sodium bicarbonate solution, followed by 5 mL of water, dried (MgSO4) and evaporated to dryness to give a gel. This material was further dried under a vacuum pump at 60 °C overnight to produce the white solid of 75 (455 mg, 92%): mp = 134–136 °C; 1H NMR (CDCl3) δ 1.32 (m, 4H), 2.01 (m, 4H), 3.16 (m, 2H), 3.30 (s, 2H), 4.96 (m, 1H), 5.11 (s, 2H), 5.76 (m, 1H), 7.25 (m, 14H) 7.64 (d, 1H, J = 7.7), 8.08 (s, 1H); HRMS m/e calcd for C30H32N4O3, 496.247; found, 496.247.
4.1.16. DL-Tryptophan n-propyl ester (33) Using a similar procedure to that for ester 27, ester 33 was obtained in 88% yield by the reaction of n-propyl alcohol with DL-tryptophan in the presence of anhydrous HCl in ether as a thick honey colored paste. TLC showed the product to be pure: Rf = 0.58 (3/2 acetone/EtOAc); 1H NMR (CDCl3) δ 0.90 (m, 3H), 1.6 (s, 2H), 1.75 (m, 2H), 3.04 (m, 1H), 3.27 (m, 1H), 3.83 (m, 1H), 4.05 (m, 2H), 7.06 (s, 1H), 7.12 (m, 1H), 7.20 (m, 1H), 7.35 (d, 1H, J = 8.1), 7.63 (d, 1H, J = 8.1), 8.30 (br s, 1H).
4.1.17. L-Tryptophan sec-butyl ester (34) L-Tryptophan (1 g, 4.9 mmol) and sec-butyl alcohol (60 mL) were placed in a 100 mL round-bottomed flask equipped with a magnetic stirring bar, a condenser and an oil bubbler. The flask was cooled in an ice-bath for 10 min and then 12 mL of an anhydrous HCl-ether solution was added via a syringe through a rubber septum at the top of the condenser. The flask was removed from the ice-bath, placed in an oil bath and then refluxed for 22 h. Three drops of conc. sulfuric acid was added and the solution was refluxed for an additional 2 h. When thin layer chromatography indicated the completion of the reaction, the mixture was allowed to cool to rt to provide a solid residue. Dichloromethane (50 mL) was added to the residue, then placed in a separatory funnel and treated with a 5% solution of sodium bicarbonate until pH ~ 8. The mixture was extracted with dichloromethane (4 × 40 mL), washed with 40 mL of brine, dried (MgSO4) and then evaporated to yield 0.88 g (69%) of 34 as a light brown gel. 1H NMR (CDCl3) δ 0.90 (m, 3H), 1.20 (m, 3H), 1.60 (m, 4H), 3.00 (m, 1H), 3.30 (m, 1H), 3.80 (m, 1H), 4.87 (m, 1H), 7.07 (s, 1H), 7.20 (m, 2H), 7.35 (d, 1H, J = 7.7), 7.65 (d, 1H, J = 7.7), 8.22 (br s, 1H); HRMS m/e calcd for C15H20N2O5, 260.152; found, 260.151.
4.1.18. 5-Hydroxytryptophan ethyl ester (36) In a 100 mL round-bottomed flask, 5-hydroxtrypyophan (1.101 g, 5 mmol), ethanol (50 mL) and 10 mL of hydrogen chloride ether solution (1.0 M) was heated in an oil bath at 88 °C for 24 h. The reaction mixture was evaporated, the solid salt was mixed with 50 mL of dichloromethane and neutralized with a solution of 14% ammonium hydroxide. The aqueous layer was extracted with EtOAc (3 × 75 mL) and the combined organic extracts were dried (MgSO4) and then evaporated to give 367 mg (29%) of ester 36 as a gel: 1H NMR (CDCl3) δ 1.22 (t, 3H, J = 7.2), 1.80 (br s, 2H), 2.02 (s, 1H), 3.00 (m, 1H), 3.22 (m, 1H), 3.77 (m, 1H), 4.15 (q, 2H, J = 7.2), 6.72 (m, 1H), 7.01 (m, 2H), 7.22 (m, 1H), 7.95 (br s, 1H); HRMS m/e calcd for C13H16N2O3, 248.115; found, 248.115.
4.1.19. 7-N-Acetyl-11'-hydroxydemethyllavendamycin isoamyl ester (41) In a 250 mL three-necked round-bottomed flask, equipped with a magnetic stirring bar and a condenser under an argon flow, isoamyl ester 27 (84 mg, 0.3 mmol) in 10 mL anhydrous DMF and 100 mL anhydrous anisole were placed. To this solution, aldehyde 17 (73.2 mg, 0.3 mmol) was added and heated to 150 °C over 3 h and then the heat was maintained for an additional 5 h. The golden yellow solution was allowed to cool to rt and then evaporated to give an orange solid that was washed with 3 mL of acetone followed by 3 mL of ether. The filtrate also gave some product as a brown solid. Total weight of the product 41 was 80.2 mg (53%): mp >290 °C; Rf = 0.23 (0.2/5 MeOH/CH2Cl2); 1H NMR (DMSO-d6) δ 1.01 (d, 6H, J = 6), 1.70 (m, 1H), 2.30 (m, 2H), 2.42 (s, 3H), 4.38 (t, 2H, J = 6.4), 7.20 (m, 1H), 7.35 (d, 1H, J = 8.8), 7.65 (d, 1H, J = 1.4), 7.71 (s, 1H), 8.40 (d, 1H, J = 8.1), 8.72 (d, 1H, J = 8.1), 8.79 (s, 1H), 9.45 (s, 1H), 10.12 (br s, 1H), 11.48 (br s, 1H); HRMS m/e calcd for C28H24N4O6 512.170; found, 512.169.
4.1.20. 7-N-Acetyl-11'-Hydroxylavendamycin methyl ester (42) In a set up similar to that for 41, in a 500 mL flask, aldehyde 17 (180.7 mg, 0.58 mmol), 5-hydroxy-β-methyltryptophan methyl ester (28, 198.8 mg, 0.8 mmol) in 390 mL of anhydrous anisole were slowly heated to 162 °C over a period of 3 h and then allowed to continue at this temperature for 26 h. In the last 2 h of the reaction, argon flow was replaced by an oxygen flow. The reaction mixture was evaporated to give a dark red solid (201 mg, 59%): mp 180–181 °C (dec); Rf = 0.49 (0.4/5 MeOH/CH2Cl2); 1H NMR (DMSO-d6) δ 2.30 (s, 3H), 2.96 (s, 3H), 3.94 (s, 3H), 7.16 (d, 1H, J = 8.8), 7.38 (d, 1H, J = 8.8), 7.61 (br s, 1H), 7.71 (s, 1H), 8.36 (d, 1H, J = 8.2), 8.69 (d, 1H, J = 8.3), 9.42 (s, 1H), 9.42 (s, 1H), 10.12 (s, 1H), 11.56 (br s, 1H); HRMS m/e calcd for C25H18N4O6, 470.122; found, 470.121.
4.1.21. 7-N-Demethyllavendamycin 2-hydroxyethanamide (44) Using a similar set up as that for 41, in a 500 mL flask, tryptophan (2-hydroxyethan)amide (30, 125.8 mg, 0.5 mmol) was dissolved in a mixture of 10 mL anhydrous DMF and 220 mL anisole, heated to 84 °C and to this, 122 mg (0.5 mmol) of 7-acetamido-2-formylquinoline-5,8-dione (17) was added. The reaction mixture was gradually heated to 150–155 °C over 3 h and kept at this temperature for another 3 h. The mixture was evaporated, the solid was washed consecutively with 5 mL portions of acetone, ether and finally petroleum ether to give 131 mg of a product. NMR showed that this product contained some of the 5,8-dihydroxy derivative that was converted to 44 by treating with 63.65 mg of DDQ in 23 mL THF and allowed to stir at rt for 20.5 h. The solid was consecutively washed with 3 mL portions of THF, acetone and petroleum ether yielding 124 mg (53%) of 44 as an orange solid: mp > 280 °C; Rf = 0.47 (0.2/5 MeOH/CH2Cl2); 1H NMR (DMSO-d6) δ 2.32 (s, 3H), 3.53 (m, 2H), 3.62 (m, 2H), 4.86 (m, 1H), 7.42 (dd, 1H, J = 7.0, 7.0), 7.67 (m, 2H), 7.84 (s, 1H), 8.54 (m, 2H), 9.07 (s, 1H), 9.09 ( m, 1H), 9.42 (d, 1H, J = 8.4), 10.32 (br s, 1H), 11.98 (br s, 1H); HRMS m/e calcd for C25H19N5O5, 469.138; found, 469.137.
4.1.22. N-Acetyldemethyllavendamycin sec-butyl ester (46) In a set up similar to that for 41, anhydrous and freshly distilled xylene (145 mL) was placed in the flask and to this, 7-acetamido-2-formylquinoline-5,8-dione (17, 0.2401 g, 1 mmol) was added and heated to 100 °C. To the mixture, a solution of L-Tryptophan sec-butyl ester (34, 0.2568 g, 1 mmol) in 12 mL of anhydrous and freshly distilled xylene under argon was added via a syringe and then heated for 16 h at 130 °C until the reaction was completed (TLC). The mixture was filtered off to produce a greenish solid and the filtrate was kept in the refrigerator overnight to give more product (total, 0.2785 g, 57%). An analytical sample of 46 was obtained by recrystallization with DMSO: mp = 268 °C; Rf = 0.46 (1.7/10 MeOH/CH2Cl2); 1H NMR (CDCl3) δ 1.03 (t, 3H, J = 7.7), 1.42 (d, 3H, J = 6.2), 1.8 (m, 1H), 2.30 (s, 3H), 5.2 (m, 1H), 7.34 (t, 1H, J = 8.1), 7.62 (t, 1H, J = 8.1), 7.69 (d, 1H, J = 8.4), 7.93 (m, 2H), 8.21 (d, 1H, J = 7.7), 8.35 (br s, 1H), 8.52 (d, 1H, J = 8.4), 8.88 (s, 1H), 9.17 (d, 1H, J = 8.4), 11.23 (br s, 1H); HRMS m/e cacd for C27H25N4O5 (M + 3H)+, 485.182; found, 485.183.
4.1.23. 7-N-Acetyldemethyllavendamycin 2,3-dihydroxypropanamide (47) In a set up similar to that for 41, tryptophan 2,3-dihydroxypropanamide (31, 114.8 mg, 0.44 mmol) was dissolved in 40 mL anhydrous DMF and 240 mL anhydrous anisole and heated to 80 °C in a 500 mL flask. To this, 7-acetamido-2-formylquinoline-5,8-dione (17, 97.6 mg, 0.44 mmol) was added and the mixture was gradually heated to 150–154 °C over a period of 3 h, and then continued at this temperature for 5 additional h. The reaction mixture was concentrated to a small volume producing 47 as orange crystals. The crystals were washed with ethyl ether and dried (104.2 mg, 52% ): mp 214–215 °C (dec); Rf = 0.4 (0.3/5 MeOH/CH2Cl2); 1H NMR (DMSO-d6) δ 2.30 (s, 3H), 3.37 (m, 1H), 3.45 (m, 2H), 3.60 (m, 1H), 4.75 (m, 1H), 5.00 (m, 1H), 7.45 (m, 1H), 7.74 (m, 2H), 7.84 (s, 1H), 8.55 (m, 2H), 9.07 (s, 1H), 9.12 (br s, 1H), 9.34 (d, 1H, J = 8.4), 11.97 (br s, 1H); HRMS m/e calcd for C26H21N5O6, 499.149; found, 499.147.
4.1.24. 7-N-Acetyldemethyllavendamycin n-propyl ester (48) In a set up similar to that of 41, in a 500 mL flask, 7-acetamido-2-formylquinoline-5,8-dione (17, 149 mg, 0.61 mmol), tryptophan n-propyyl ester (33, 162 mg, 0.66 mmol) in 90 mL anhydrous and distilled xylene were heated to 100 °C over one h and then allowed to reflux for 3 h. While hot, some solid impurities were filtered and the filtrate was evaporated to a small volume and allowed to cool giving an orange-red solid. The product was dried on a vacuum pump, producing 80 mg (30%) of 48: mp 265 °C (dec): Rf = 0.48 (0.1/5 MeOH/CH2Cl2); 1H NMR (CDCl3) δ 1.13 (t, 3H, J = 7.3), 1.94 (m, 2H), 2.36 (s, 3H), 4.46 (t, 2H, J = 7.4), 7.40 (t, 1H, J = 8.1), 7.67 (t, 1H, J = 6.9), 7.75 (d, 1H, J = 8.0), 8.00 (s, 1H), 8.26 (d, 1H, J = 7.6), 8.44 (s, 1H), 8.58 (d, 1H, J = 8.4), 8.97 (s, 1H), 9.22 (d, 1H, J = 7.1), 11.83 (br s, 1H); HRMS m/e calcd for C26H20N4O5; 468.143; found, 468.144.
4.1.25. 7-N-Acetyldemethyllavendmycin N-benzylpiperazine amide (49) In a set up similar to that for 41, in a 100 mL flask, aldehyde 17 (122 mg, 0.5 mmol) in 40 mL anhydrous anisole was stirred and heated to 70 °C until it was dissolved. A solution of N-benzylpiperazine amide of tryptophan (32, 180 mg, 0.5 mmol) in 5 mL dried and freshly distilled pyridine was introduced to the reaction flask using a syringe. The reaction mixture was heated to reflux (30 min) and then maintained at this temperature for 6 h. The mixture was allowed to cool to rt , the yellow lemon precipitate was filtered off and the filter cake was washed with THF (3 mL), followed by petroleum ether (3 mL). The solid was vacuum dried, suspended in 10 mL THF and then treated with DDQ (94 mg, 0.41 mmol), stirred at rt for 24 h in order to oxidize any 5,8-dihydroxy lavendamycin present in the mixture to 49. The brown reaction mixture was filtered off, the filter cake washed with THF (3 mL) followed by petroleum ether (3 mL) and dried on a vacuum pump giving 115 mg (40%): mp > 260 °C; Rf = 0.88 (1/7 MeOH/CH2Cl2); 1H NMR (DMSO-d6) δ 2.32 (s, 3H), 3.30 (m, 4H), 3.57 (s, 2H), 3.76 (m, 4H), 7.32 (m, 6H), 7.70 (m, 2H), 7.81 (s, 1H), 8.47 (d, 1H, J = 7.7), 8.55 (d, 1H, J = 8.2), 8.70 (s, 1H), 8.86 (d, 1H, J = 8.2), 10.30 (br s, 1H), 11.85 (br s, 1H); HRMS m/e calcd for C34H28N6O4; 584.217; found, 584.219.
4.1.26. 7-N-Acetyl-11'-hydroxydemethyllavendamycin ethyl ester (51) Using a similar set up to that for
41, in a 100 mL flask, 5-hydroxytryptophan ethyl ester (36, 29.76 mg, 0.12 mmol) in 4 mL of DMF was added to 40 mL anhydrous anisole and then with 29.8 mg (0.12 mmol) of 7-acetamido-2-formylquinoline-5,8-dione
9,10 (
17) was gradually heated to 160 °C over 3 h and kept at this temperature for 23.5 h. The orange solution was evaporated to give a dark solid. The crude product was washed with 3 mL acetone and dried under vacuum producing the dark violet
51 (27 mg, 48%): mp > 280 °C; R
f = 0.69 (0.2/5 MeOH/ CH
2Cl
2);
1H NMR (DMSO-
d6) δ 1.44 (m, 3H), 2.30 (s, 3H), 4.40 (m, 2H), 7.17 (m, 1H), 7.40 (m, 1H), 7.67 (br s, 1H), 7.74 (s, 1H), 8.44 (d, 1H,
J = 8.4), 8.78 (d, 1H,
J = 8.4), 8.84 (s, 1H), 9.45 (s, 1H), 10.15 (br s, 1H), 11.53 (br s, 1H); HRMS
m/e calcd for C
25H
18N
4O
6, 470.122; found, 470.121.
4.1.27. 7-N-Formyldemethyllavendamycin methyl ester (53) In a similar set up as that for 41, 7-formamido-2-formylquinoline-5,8-dione (20, 50 mg, 0.22 mmol), and tryptophan methyl ester (46 mg, 0.21 mmol) were dissolved in 125 mL of anhydrous anisole in a 250 mL flask, heated to 130 °C over an h and continued for another 1.5 h. Anisole was evaporated and the solid residue was washed with 5 mL of acetone. The brownish solid was filtered off and washed with a few mL acetone and dried. The product 53 weighed 18.45 mg (19.6%): mp > 300 °C; Rf = 0.79 (0.2/2.3 MeOH/EtOAC/CH2Cl2); 1H NMR (CDCl3) δ 4.1 (s, 3H), 7.42 (m, 1H), 7.69 (m, 1H), 7.78 (d, 1H, J = 8.1), 8.02 (s, 1H), 8.26 (d, 1H, J = 8.1), 8.53 (br s, 1H), 8.61 (d, 1H, J = 8.4), 8.76 (br s, 1H), 9.02 (s, 1H), 9.26 (d, 1H, J = 8.4), 11.85 (br s, 1H); HRMS m/e calcd for C23H14N4O5, 426.099; found, 426.096.
4.1.28. 7-N-Chloroacetyldemethyllavendamycin amide (54) In a set up similar to that of
53, 7-
N-chloroacetyl-2-formylquinoline-5,8-dione
15 (
21, 82.7 mg, 0.3 mmol), tryptophan amide
13 (
39, 61 mg, 0.3 mmol), and anhydrous anisole (120 mL) were mixed, stirred and heated to 155 °C over a period of 3 h. Upon the completion of the reaction after 20 h, the mixture was allowed to cool to room temperature and the yellow solid was filtered off. The product was washed with petroleum ether and dried on a vacuum pump overnight to give 68 mg (49%) of pure
54: mp> 280 °C; R
f = 0.35 (0.25/5 MeOH/CH
2Cl
2).
1H NMR (DMSO-
d6) δ 4.55 (s, 2H), 7.39 (t, 1H,
J = 8.4), 7.70 (t, 1H,
J = 8.4), 7.82 (d, 1H,
J = 8.0), 8.49 (s, 1H), 8.49 (d, 1H,
J = 8.1), 8.61 (d, 1H,
J = 8.8), 9.02 (s, 1H), 9.12 (d, 1H,
J = 9.2), 9.75 (s, 1H), 9.93 (s, 1H), 10.19 (s, 1H), 12.26 (br s, 1H); HRMS
m/e calcd for C
23H
14ClN
5O
4, 462.097; found, 462.097.
4.1.29. 7-N-Chloroacetyldemethyllavendamycin pyrrolidine amide (55) In a similar set up to that of
53, quinolinedione aldehyde
21 (42.5 mg, 0.15 mmol), tryptophan pyrrolidine amide
15 (
29, 39 mg, 0.15 mmol) and 55 mL anhydrous anisole were mixed in a 100 mL flask. The mixture was gradually heated to 155 °C over a period of 3 h and then heated at this temperature for an additional 18 h. The reaction mixture was filtered off hot and the filter cake was washed with 4 mL of dichloromethane followed by 4 mL of chloroform. The filtrate was evaporated, the crude product was introduced on a small column of silica gel and eluted with ethyl acetate to produce 11 mg (21%) of pure
55 as a yellow solid: mp 264 °C (dec); R
f = 0.77 (0.25/5 MeOH/CH
2Cl
2).
1H NMR (DMSO-
d6) δ 1.96 (m, 4H), 3.64 (m, 2H), 3.98 (m, 2H), 4.66 (s, 2H), 7.41 (t, 1H,
J = 8.1), 7.71 (m, 2H), 7.81 (s, 1H), 8.48 (d, 1H,
J =8.1), 8.57 (d, 1H,
J = 8.1), 8.88 (s, 1H), 8.9
4 (d, 1H,
J = 8.4), 10.65 (s, 1H), 11.87 (br s, 1H); HRMS
m/e calcd for C
27H
20ClN
5O
4, 513.124; found, 513.120.
4.1.30. 7-N-(2-Furyl)carbonyllavendamycin methyl ester (56) Using a similar set up to that of
53, in a 50 mL flask, a mixture of 7-furoylamino-2-formylquinoline-5,8-dione
16 (
22, 29.7 mg, 0.10 mmol), β-methyltryptophan methyl ester
31 (
37, 23.1 mg, 0.10 mmol) and 32 mL freshly distilled anydrous xylene was gradually heated to 145 °C over a 3 h period. The heat was continued for an additional 19 h and then the mixture was evaporated to dryness. The dark orange solid was washed with a small amount of chloroform producing the light orange solid
56 (30.11 mg, 60%): mp 327–328 °C; R
f = 4.1 (0.1/5 MeOH/CH
2Cl
2);
1H NMR (CDCl
3) δ 3.21 (s, 3H), 4.09 (s, 3H), 6.68 (m, 1H), 7.41 (m, 2H),7.68 (m, 2H), 7.82 (m, 1H), 8.06 (m, 1H), 8.36 (m, 1H), 8.53 (d, 1H,
J = 8.4), 9.12 (d, 1H,
J = 8.4), 9.36 (s, 1H), 11.92 (br s, 1H). HRMS
m/e calcd for C
28H
18N
4O
6, 506.122; found, 506.122.
4.1.31. 7-N-(3-Carboxypropionyl)demethyllavendamycin n-butyl ester (57) Using the same set up as that of
53, 60 mL of anhydrous anisole was placed in a 100 mL flask and then tryptophan
n-butyl ester
13 (
38, 39.5 mg, 0.15 mmol) was added followed by 40 mg (0.13 mmol) of 7-
N-(3-carboxypropionyl)-2-formylquinoline-5,8-dione (
23). With stirring, this mixture was heated at 120 °C for 19.5 h. The reaction mixture was filtered to remove the solid impurity and the filtrate was evaporated. The amorphous solid was recrystallized from 10 mL ethyl acetate to give 22 mg (29%) of
57 as a red crystalline solid: mp 232.4 °C (dec); R
f = 0.83 (2.5/3.5 MeOH/CHCl
3).
1H NMR (DMSO-
d6) δ 1.01 (t, 3H,
J = 7.3), 1.54 (m, 2H), 1.83 (m, 2H), 2.50 (m, 2H), 2.90 (m, 2H), 4.50 (m, 2H), 7.50 (m, 1H), 7.70 (m, 2H), 7.80 (s, 1H), 8.54 (d, 1H,
J = 8.0), 8.59 (d, 1H,
J = 8.4), 8.93 (d, 1H,
J = 8.4), 9.09 (s, 1H), 10.35 (br s, 1H), 11.97 (br s, 1H); HRMS
m/e calcd for C
29H
25N
4O
7 (MH
+), 541.172; found, 541.172.
4.1.32. 6-Chlorodemethyllavenamycin ethyl ester (58) In a 500 mL flask with similar set up to that of
53, a mixture of 7-amino-6-chloro-2-formylquinoline-5,8-dione (
24, 47.4 mg. 0.2 mmol) and tryptophan ethyl ester
17 (
35, 46.4 mg, 0.2 mmol) and 120 mL anhydrous anisole was slowly heated to 130 °C over 3 h. The reaction mixture was refluxed for 1 h and then allowed to cool to rt. The solvent was evaporated to dryness, the solid washed with acetone (20 mL), filtered and dried under vacuum giving 47 mg (49%) of
58: mp > 270 °C; R
f = 0.26 (0.1/5 MeOH/CH
2Cl
2);
1H NMR CDCl
3) δ 1.57 (m, 3H), 4.57 (q, 2H,
J = 7.2), 5.86 (br s, 2H), 7.42 (m, 1H), 7.68 (m, 1H), 7.77 (d, 1H,
J = 7.3), 8.27 (d, 1H,
J = 7.8), 8.67 (d, 1H,
J = 8.2), 9.00 (s, 1H), 9.22 (d, 1H,
J = 8.3), 11.86 (br s, 1H); HRMS
m/e calcd for C
23H
16ClN
4O
4 (MH
+), 447.086; found, 447.086.
4.1.33. Demethyllavendamycin morpholine amide (59) In a 25 mL two-necked round-bottomed flask, equipped with a magnetic stirring bar, a condenser and an argon filled balloon, 7-
N-acetyldemethyllavendamycin morpholine amide
15(
40, 163 mg, 0.33 mmol) was placed and kept for a few min in an ice-bath. To this 15.8 mL of 70% sulfuric acid was dropwise added until the solid was dissolved. The mixture was heated at 61 °C for 6 h. To the reaction mixture, 10 mL water was added and neutralized to a pH of 8.5 with a saturated solution of sodium carbonate. The mixture was evaporated to give a solid material, that was finely ground by mortar and pestle and extracted with 160 mL of chloroform in a Soxhlet extractor overnight. The resulting solution was evaporated and dried to give 91 mg (63%) of the red orange
59: mp 275–276 °C; R
f = 0.39 (0.01/5 MeOH/CH
2Cl
2);
1H NMR (DMSO-
d6) δ 3.74 (m, 8H), 5.95 (s, 1H), 7.39 (t, 1H,
J = 8.1), 7.48 (br s, 2H), 7.70 (m, 2H), 8.47 (d, 1H,
J = 8.1), 8.49 (t, 1H,
J = 8.1), 8.71 (s, 1H), 8.84 (d, 1H,
J = 8.4) 11.87 (br s, 1H). HRMS
m/e calcd for C
25H
20N
5O
4 (MH
+), 454.154; found, 454.151.
4.1.34. 11'-Hydroxydemethyllavendamycin isoamyl ester (60) In a procedure similar to that of 59, 7-N-acetyldemethyllavendamycin isoamyl ester (41, 25.1 mg, 0.05 mmol) and 2.4 mL of sulfuric acid (70%) was heated at 60 °C for 3.5 h. The reaction mixture was carefully neutralized with a saturated solution of sodium bicarbonate to pH = 8, and then extracted with chloroform (4 × 100 mL). The organic extracts were washed with water followed by brine and then dried (MgSO4). Evaporation of the solvent produced 16 mg (70%) of the orange product 60: mp > 280 °C; Rf = 0.23 (0.2/5 MeOH/CH2Cl2); 1H NMR (DMSOd6) δ 1.01(d, 6H, J = 6.2), 1.74 (m, 3H), 4.43 (m, 2H), 5.95 (s, 1H), 7.25 (d, 1H, J = 8.8), 7.61 (d, 1H, J = 8.8), 7.78 (br s, 1H), 8.54 (d, 1H, J = 8.4), 8.90 (d, 1H, J = 8.4), 8.97 (s, 1H), 9.46 (s, 1H), 11.82 (br s, 1H); HRMS m/e calcd for C26H22N4O5, 471.167; found, 471.169.
4.1.35. 11´-Hydroxylavendamycin methyl ester (61) In a similar set up and procedure to that of 59, acetyllavendamycin ester 42 (98.4 mg, 0.21 mmol) was slowly added to 15 mL of a 70% solution of sulfuric acid at 0 °C and then heated at 60 °C for 3 h. The reaction mixture was treated with a saturated solution of sodium carbonate to pH = 8 and extracted with 8 × 75 mL of ethyl acetate, dried and evaporated to give 61 as red crystals. The aqueous layer was evaporated to dryness, the solid was ground and extracted with 150 mL ethyl acetate for 24 h in a Soxhelet extractor. Evaporation of the solution afforded more of 61 (total weight 33.7 mg, 38%): mp > 280 °C; Rf = 0.72 (0.4/5 MeOH/CH2Cl2); 1H NMR (DMSO-d6) δ 2.85 (s, 3H), 3.90 (s, 3H), 5.85 (s, 1H), 7.06 (d, 1H, J = 8.8), 7.30 (d, 1H, J = 8.8), 7.41 (br s, 2H), 7.49 (s, 1H), 8.23 (d, 1H, J = 8.1), 8.50 (d, 1H, J = 8.1), 9.30 (s, 1H), 11.36 (s, 1H); HRMS m/e calcd for C23H16N4O5, 428.112; found, 428.113.
4.1.36. Demethyllavendamycin pyrrolidine amide (62) In a similar procedure to that for
59, 51 mg (0.11 mmol) of 7-
N-acetyldemethyllavendamycin pyrrolidine amide
15 (
43), was hydrolyzed with 5.2 mL of 70% sulfuric acid to give 24 mg (50%) of the orange red product
62: mp 300 °C; R
f = 0.22 (0.1/5 MeOH/CH
2Cl
2);
1H NMR (DMSO-
d6) δ 1.92 (m, 4H), 3.63 (m, 2H), 3.98 (m, 2H), 5.95 (s, 1H), 7.39 (m, 2H), 7.77 (m, 3H), 8.45 (m, 2H), 8.84 (m, 2H), 11.89 (br s, 1H); HRMS
m/e calcd for C
25H
20N
5O
3 (MH
+) 438.156; found 438.156.
4.1.37. Demethyllavendamycin 2-hydroxyethanamide (63) Lavendamycin 44 (70.5 mg, 0.15 mmol) was added slowly to 7.2 mL of 70% sulfuric acid and heated at 60 °C for 3.5 h. The mixture was treated with a saturated solution of sodium carbonate to pH = 8 and evaporated to dryness. The residue was extracted with 70 mL of methanol/dichloromethane (10/60) and then with 35 mL of the same mixture. The extracts were concentrated to a small volume and the red crystals of 63 were filtered off (18.9 mg, 30%): mp > 280 °C; Rf = 0.31 (0.3/5 MeOH/CH2Cl2); 1H NMR (DMSO-d6) δ 3.83 (m, 2H), 4.40 (m, 2H), 5.02 (br s, 2H), 5.96 (s, 1H), 7.40 (m, 1H), 7.73 (m, 2H), 7.78 (d, 1H, J = 8.0), 8.5 (d, 1H, J = 8.0), 8.85 (d, 1H, J = 8.1), 8.92 (d, 1H, J = 8.1), 9.12 (s, 1H), 12.01 (br s, 1H); HRMS m/e calcd for C23H17N5O4, 427.128; found, 427.130.
4.1.38. Demethyllavendamycin methyl ester (64) Using a similar set up as that for
59, 7-
N-butyryldemethyllavendamycin methyl ester
17 (
45, 22 mg, 0.05 mmol) was slowly added to 2 mL of 70% sulfuric acid in a 5 mL flask with stirring. The mixture was heated at 60 °C for 4 h, then carefully neutralized with a saturated solution of sodium carbonate to pH = 8 and extracted with chloroform (2 × 100 mL and 50 mL). The extracts were evaporated to give
64 as a red solid (17 mg, 85%): mp 220 °C (dec); R
f = 0.35 (0.1/5 MeOH/CH
2Cl
2);
1H NMR (CDCl
3) δ 4.00 (s, 3H), 5.35 (br s, 2H), 6.15 (s, 1H), 7.41 (m, 1H), 7.70 (m, 2H), 7.81 (d, 1H,
J = 8.0), 8.27 (d, 1H,
J = 8.0), 8.60 (d, 1H,
J = 8.3), 9.20 (d, 1H,
J = 8.3), 12.00 (br s, 1H); HRMS
m/e calcd for C
22H
14N
4O
4, 398.101; found, 398.099.