1. Borisov SM, Klimant I. Analyst. 2008;133:1302–1307. [PubMed] 2. Fréchet JMJ, Tomalia DA, editors. Dendrimers and Other Dendritic Polymers. Wiley; New York: 2001.
3. (a) Gorman CB, Smith JC. Acc Chem Res. 2001;34:60. [PubMed] (b) Hecht S, Fréchet JMJ. Angew Chem, Int Ed. 2001;40:74. [PubMed] 4. (a) Balzani V, Ceroni P, Maestri M, Saudan C, Vicinelli V. Top Curr Chem. 2003;228:159–191. [PubMed] (b) Ceroni P, Bergamini G, Marchioni F, Balzani V. Prog Polym Sci. 2005;30:453–473. 5. (a) Vanderkooi JM, Maniara G, Green TJ, Wilson DF. J Biol Chem. 1987;262:5476–5482. [PubMed] (b) Wilson DF, Rumsey WL, Green TJ, Vanderkooi JM. J Biol Chem. 1988;263:2712–2718. [PubMed] 6. Oximetry using solid-state luminescent probes or probes in which phosphorescent chromophores are embedded in polymeric carrier nanoparticles is a large area of research (for selected examples, see refs 7 and 20). In this paper, we focus on “molecular” oxygen probes, where each sensing motif is an individual well-characterized molecule.
7. (a) Demas JN, DeGraff BA, Coleman PB Anal Chem. 1999;71:793A–800A. [PubMed] (b) Amao Y Microchim Acta. 2003;143:1–12. (c) Papkovsky DB, O’Riordan TC J Fluores. 2005;15:569–584. [PubMed]For recent examples, see: (d) Huynh L, Wang ZU, Yang J, Stoeva V, Lough A, Manners I, Winnik MA Chem Mater. 2005;17:4765–4773. (e) Fernandez-Sanchez JF, Roth T, Cannas R, Nazeeruddin MK, Spichiger S, Graetzel M, Spichiger-Keller UE Talanta. 2007;71:242–250. [PubMed] (f) Borisov SM, Klimant I Anal Chem. 2007;79:7501–7509. [PubMed] (g) Borisov SM, Nuss G, Klimant I Anal Chem. 2008;80:9435–9442. [PubMed] 8. (a) Pawlowski M, Wilson DF Adv Exp Med Biol. 1992;316:179–182. [PubMed] (b) Rumsey WL, Vanderkooi JM, Wilson DF Science. 1988;241:1649–1651. [PubMed] (c) Shonat RD, Wilson DF, Riva CE, Pawlowski M Appl Opt. 1992;33:3711–3718. [PubMed] (d) Wilson DF, Cerniglia G Cancer Res. 1992;52:3988–3993. [PubMed]For more recent examples, see: (e) Kindig CA, Kelley KM, Howlett RA, Stary CM, Hogan MC J Appl Physiol. 2003;94:353–357. [PubMed] (f) Ferreira LF, McDonough P, Behnke BJ, Musch TI, Poole DC Respir Physiol Neurobiol. 2006;153:237–249. [PubMed] (g) Johannes T, Mik EG, Nohe B, Unertl KE, Ince C Am J Physiol Ren Physiol. 2007;292:F796–F803. [PubMed] (h) Golub AS, Pittman RN Am J Physiol Heart Circ Physiol. 2008;294:H2905–H2916. [PubMed] 9. Finikova OS, Lebedev AY, Aprelev A, Troxler T, Gao F, Garnacho C, Muro S, Hochstrasser RM, Vinogradov SA. ChemPhysChem. 2008;9:1673–1679. [PMC free article] [PubMed] 11. Koch CJ. Redox Cell Biology and Genetics. Part A. Vol. 352. Elsevier; New York: 2002. pp. 3–31.
12. Swartz HM, Clarkson RB. Phys Med Biol. 1998;43:1957–1975. [PubMed] 13. Krishna MC, English S, Yamada K, Yoo J, Murugesan R, Devasahayam N, Cook JA, Golman K, Ardenkjaer-Larsen JH, Subramanian S, Mitchell JB. Proc Natl Acad Sci USA. 2002;99:2216–2221. [PubMed] 14. Jobsis FF. Science. 1977;198:1264–1267. [PubMed] 15. (a) Ziemer LS, Evans SM, Kachur A, Shuman AL, Cardi CA, Jenkins WT, Karp JS, Alavi A, Dolbier WR, Koch CJ. Eur J Nucl Med Mol Imaging. 2003;30:259–266. [PubMed] (b) Tatum JL, Kelloff GJ, Gillies RJ. Int J Radiat Biol. 2006;82:699–757. [PubMed] 16. Sibrian-Vazquez M, Jensen TJ, Vicente MGH. J Photochem Photobiol, B. 2007;86:9–21. [PubMed] 17. (a) Vinogradov SA, Wilson DF. Adv Exp Med Biol. 1997;428:657–662. [PubMed] (b) Vinogradov SA, Lo LW, Wilson DF. Chem—Eur J. 1999;5:1338–1347. (c) Rietveld IB, Kim E, Vinogradov SA. Tetrahedron. 2003;59:3821–3831. 18. (a) Dunphy I, Vinogradov SA, Wilson DF. Anal Biochem. 2002;310:191–198. [PubMed] (b) Thompson JK, Peterson MR, Freeman RD. Science. 2003;299:1070–1072. [PubMed] (c) Poole DC, Behnke BJ, McDonough P, McAllister RM, Wilson DF. Microcirculation. 2004;11:317–326. [PubMed] (d) Pirow R, Baumer C, Paul RJ. J Exp Biol. 2004;207:4393–4405. [PubMed] (e) Wilson DF, Lee WMF, Makonnen S, Finikova O, Apreleva S, Vinogradov SA. J Appl Physiol. 2006;101:1648–1656. [PubMed] (f) Johannes T, Mik EG, Ince C. J Appl Physiol. 2006;100:1301–1310. [PubMed] 19. Estrada AD, Ponticorvo A, Ford TN. Opt Lett. 2008;33:1038–1040. [PubMed] 20. (a) Xu H, Aylott JW, Kopelman R, Miller TJ, Philbert MA. Anal Chem. 2001;73:4124–4133. [PubMed] (b) Ji J, Rosenzweig N, Jones I, Rosenzweig Z. Anal Chem. 2001;73:3521–3527. [PubMed] (c) Koo YEL, Cao YF, Kopelman R, Koo SM, Brasuel M, Philbert MA. Anal Chem. 2004;76:2498–2505. [PubMed] (d) Han BH, Winnik MA, Bourlinos AB, Giannelis EP. Chem Mater. 2005;17:4001–4009. (e) Zhang HD, Sun YH, Ye KQ, Zhang P, Wang Y. J Mater Chem. 2005;15:3181–3186. (f) Guice KB, Caldorera ME, McShane MJ. J Biomed Opt. 2005;10:064031. [PubMed] (g) Schmalzlin E, van Dongen JT, Klimant I, Marmodee B, Steup M, Fisahn J, Geigenberger P, Lohmannsroben HG. Biophys J. 2005;89:1339–1345. [PubMed] 21. Turro NJ. Modern Molecular Photochemistry. University Science Books; Sausalito, CA: 1991.
22. At 298 K and an air pressure of 760 mmHg (oxygen fraction in the air is 21% or 159.6 mmHg), air-equilibrated aqueous solutions are 252 μM in O2 (Fogg PGT, Gerrard W Solubility of gases in liquids. Wiley; New York: 2001. ).
23. Eastwood D, Gouterman M. J Mol Spectrosc. 1970;35:359–375.
24. Kim DH, Holten D, Gouterman M, Buchler JW. J Am Chem Soc. 1984;106:4015–4017.
25. Morris KJ, Roach MS, Xu WY, Demas JN, DeGraff BA. Anal Chem. 2007;79:9310–9314. [PubMed] 26. The “brightness” of the chromophore is defined as the product of the molar extinction coefficient and the emission quantum yield.
27. DeRosa MC, Mosher PJ, Yap GPA, Focsaneanu KS, Crutchley RJ, Evans CEB. Inorg Chem. 2003;42:4864–4872. [PubMed] 28. (a) Vinogradov SA, Wilson DF. J Chem Soc, Perkin Trans. 2;1995:103–111. (b) Vinogradov SA, Lo LW, Jenkins WT, Evans SM, Koch C, Wilson DF. Biophys J. 1996;70:1609–1617. [PubMed] 29. Papkovsky DB, Ponomarev GV, Wolfbeis OS. Spectrochim Acta, Part A. 1996;52:1629–1638.
30. Zhang G, Chen J, Payne SJ, Kooi SE, Demas JN, Fraser CL. J Am Chem Soc. 2007;129:8942. [PubMed] 31. (a) Finikova O, Cheprakov A, Beletskaya I, Vinogradov S. Chem Commun. 2001:261–262. (b) Finikova OS, Cheprakov AV, Carroll PJ, Vinogradov SA. J Org Chem. 2003;68:7517–7520. [PubMed] (c) Finikova OS, Cheprakov AV, Beletskaya IP, Carroll PJ, Vinogradov SA. J Org Chem. 2004;69:522–535. [PubMed] (d) Finikova OS, Aleshchenkov SE, Briñas RP, Cheprakov AV, Carroll PJ, Vinogradov SA. J Org Chem. 2005;70:4617–4628. [PubMed] (e) Finikova OS, Cheprakov AV, Vinogradov SA. J Org Chem. 2005;70:9562–9572. [PubMed] (f) Filatov MA, Lebedev AY, Vinogradov SA, Cheprakov AV. J Org Chem. 2008;73:4175–4185. [PubMed] 32. (a) Tsvirko MP, Sapunov VV, Soloviyev KN. Opt Spektrosk. 1973;34:1094–1100. (b) Rozhkov VV, Khajehpour M, Vinogradov SA. Inorg Chem. 2003;42:4253–4255. [PubMed] 33. (a) Borek C, Hanson K, Djurovich PI, Thompson ME, Aznavour K, Bau R, Sun YR, Forrest SR, Brooks J, Michalski L, Brown J. Angew Chem, Int Ed. 2007;46:1109–1112. [PubMed] (b) Sommer JR, Farley RT, Graham KR, Yang Y, Reynolds JR, Xue J, Schanze KS. ACS Appl Mater Interfaces. 2009;1:274–278. [PubMed] 34. meso-Tetraarylated porphyrins, tetrabenzoporphyrins, and tetranaphthoporphyrins are usually abbreviated as Ar4P, Ar4TBP, and Ar4TNP, respectively, in order to distinguish them from meso-unsubstituted analogues. In the present paper, we used only meso-tetrarylated macrocycles, and therefore we omit the prefix “Ar4”.
35. (a) Knyukshto VN, Sagun EI, Shul’ga AM, Bachilo SM, Starukhin DA, Zen’kevich EI. Opt Spectrosk. 2001;90:67. (b) Knyukshto VN, Shul’ga AM, Sagun EI, Zen’kevich EI. Opt Spectrosk. 2002;92:53. (c) Knyukshto VN, Shul’ga AM, Sagun EI, Zen’kevich EI. Opt Spectrosk. 2006;100:590–601.
36. Lebedev AY, Filatov MA, Cheprakov AV, Vinogradov SA. J Phys Chem A. 2008;112:7723–7733. [PMC free article] [PubMed] 37. Seybold PG, Gouterman M. J Mol Spectrosc. 1969;31:1.
38. Taroni P, Pifferi A, Torricelli A, Comelli D, Cubeddu R. Photochem Photobiol Sci. 2003;2:124–129. [PubMed] 39. Tripathy U, Kowalska D, Liu X, Velate S, Steer RP. J Phys Chem A. 2008;112:5824–5833. [PubMed] 40. Lindsey JS, Schreiman IC, Hsu HC, Kearney PC, Marguerettaz AM. J Org Chem. 1987;52:827–836.
41. (a) Arnold DP, Burgess-Dean L, Hubbard J, Abdur Rahman M. Aust J Chem. 1994;47:969–974. (b) Abel Y, Haake E, Haake G, Schmidt W, Struve D, Walter A, Montforts FP. Helv Chim Acta. 1998;81:1978–1996.
42. For examples, see: (a) Jin RH, Aida T, Inoue S J Chem Soc, Chem Commun. 1993:1260–1262. (b) Sadamoto R, Tomioka N, Aida T J Am Chem Soc. 1996;118:3978–3979. (c) Kimura M, Nakada K, Yamaguchi Y, Hanabusa K, Shirai H, Kobayashi N Chem Commun. 1997:1215–1216. (d) Issberner J, Vögtle F, DeCola L, Balzani V Chem—Eur J. 1997;3:706–712. (e) Vögtle F, Plevoets M, Nieger M, Azzellini GC, Credi A, De Cola L, De Marchis V, Venturi M, Balzani V J Am Chem Soc. 1999;121:6290–6298. (f) Riley JM, Alkan S, Chen AD, Shapiro M, Khan WA, Murphy WR, Hanson JE Macromolecules. 2001;34:1797–1809.
43. Rozhkov V, Wilson D, Vinogradov S. Macromolecules. 2002;35:1991–1993.
44. Khajehpour M, Rietveld I, Vinogradov S, Prabhu NV, Sharp KA, Vanderkooi JM. Proteins: Struct, Funct, Genet. 2003;53:656–666. [PubMed] 45. Vinogradov SA. Org Lett. 2005;7:1761–1764. [PubMed] 46. Caliceti P, Veronese FM. Adv Drug Delivery Rev. 2003;55:1261–1277. [PubMed] 47. Gajbhiye V, Kumar PV, Tekade RK, Jain NK. Curr Pharm Des. 2007;13:415–429.
48. Guillaudeu SJ, Fox ME, Haidar YM, Dy EE, Szoka FC, Fréchet JMJ. Bioconjugate Chem. 2008;19:461–469. [PubMed] 49. Dichtel WR, Baek KY, Fréchet JMJ, Rietveld IB, Vinogradov SA. J Polym Sci, Part A: Polym Chem. 2006;44:49394951.
50. Kaminski ZJ. Biopolymers. 2000;55:140–164. [PubMed] 51. Han SY, Kim YA. Tetrahedron. 2004;60:2447–2467.
52. Biechler SS, Taft RW. J Am Chem Soc. 1957;79:4927–4935.
53. Dandliker PJ, Diederich F, Gross M, Knobler CB, Louati A, Sanford EM. Angew Chem, Int Ed. Vol. 33. 1994. pp. 1739–1742. (b) Dandliker PJ, Diederich F, Gisselbrecht JP, Louati A, Gross M. Angew Chem, Int Ed. 1996;34:2725–2728.
54. While this paper was in preparation, an article appeared in press (ref 33b) reporting independently on the photophysical properties of platinum tetraphenyltetranaphthoporphyrin.
55. The plots of Pt-1-OPEG and 8 display lower kq values than they would be expected to display in the absence of aggregation.
56. In separate experiments, we have established that dendritic probes do not permeate cellular membranes and that the presence of erythrocytes has no effect on the calibration constants.
57. Vinogradov SA, Fernandez-Seara MA, Dugan BW, Wilson DF. Rev Sci Instrum. 2001;72:3396–3406.
58. (a) Marshall WH. Physiol Rev. 1959;39:239–279. [PubMed] (b) Ayata C, Shin HK, Salomone S, Ozdemir-Gursoy Y, Boas DA, Dunn AK, Moskowitz MA. J Cereb Blood Flow Metab. 2004;24:1172–1182. [PubMed] (c) Sakadžić S, Yuan S, Dilekoz E, Ruvinskaya S, Vinogradov SA, Ayata C, Boas DA. Appl Opt. 2009 in press. 59. Hadjikhani N, Sanchez Del Rio M, Wu O, Schwartz D, Bakker D, Fischl B, Kwong KK, Cutrer FM, Rosen BR, Tootell RB, Sorensen AG, Moskowitz MA. Proc Natl Acad Sci USA. 2001;98:4687–4692. [PubMed] 60. Nedergaard M. Acta Neurol Scand. 1988;77:81–101. [PubMed] 61. Khajehpour M, Rietveld I, Vinogradov S, Prabhu NV, Sharp KA, Vanderkooi JM. Proteins: Struct, Funct, Genet. 2003;53:656–666. [PubMed]