The fact that RNA is not intrinsically toxic implies that there must be one or more protein effectors of the gain-of-function effects of the expanded CGG-repeat mRNA. To address this issue, a combination of gel-based methods and tandem mass spectrometry (MS) were utilized to identify more than 20 proteins in the inclusions. (
31) Among the proteins found within the inclusions were several stress-response (“heat shock”) proteins, including HSP27, HSP70, and αB-crystallin. The presence of these proteins suggests that there is an overall cellular stress induced by the expanded CGG-repeat mRNA. While this observation is not unexpected, the nature and origin of the primary stress are currently not known.
Also included in the list of proteins are the lamin A/C isoforms, the presence of which provided the impetus for the investigation of the lamin architecture mentioned above. The presence of the lamin isoforms within the inclusions, coupled with the altered nuclear lamin architecture, provide a potentially important link to the clinical features of FXTAS; namely, the prominence of peripheral neuropathy among those who have the core features of FXTAS (tremor and gait ataxia), and even among those who are carriers of premutation alleles, but who do not have FXTAS. (
19,
24,
50,
51) Mutations in the
LMNA gene are known to give rise to a form of axonal Charcot-Marie-Tooth (CMT) peripheral neuropathy (CMT Type 2B1; OMIM #605588), suggesting that the neuropathic features of FXTAS may represent at least in part a functional laminopathy.
Also among the species present in the inclusions are at least three RNA binding proteins, hnRNP A2, MBNL1, and purα (
31,
52). While for none of these proteins is there evidence of functional importance in FXTAS pathogenesis, the work of Jin and co-workers (
52) in
Drosophila suggests that the CGG-induced neurodegenerative phenotype can be rescued by overexpression of purα. Based on the broad range of functions of purα in DNA replication/repair, transcription, and translation, coupled with the early postnatal lethal phenotype of purα knockout in mice,
(Review: 53) it is somewhat surprising that the phenotype of FXTAS is both late adult-onset and incompletely penetrant. However, a purα-coupled mechanism might be consistent with a moderately lowered level of purα due to partial sequestration. Additional work will be needed in mouse models in order to define the role (if any) of purα in FXTAS. Interestingly, purα was not observed in the inclusions by MS, though low levels of that protein, not detectable by those methods could still be revealed through immunohistochemical methods. HnRNP A2, another of the RNA binding proteins identified by MS, (
31) was also shown to exhibit a rescue phenotype in
Drosophila. (
43) It is possible that partial sequestration of hnRNP A2 may lead to altered transport of its target mRNAs and cause cellular dysregulation.
A third RNA binding protein, MBNL1, found in the FXTAS inclusions, plays a prominent role in myotonic dystrophy; however, as yet, there is no evidence for a functional role of this protein in FXTAS. MBNL1 has not been shown to bind CGG repeat mRNA directly; however recent evidence implicates it as a more general modulator of repeat RNA toxicity. (
54) Those researchers were able to induce neurodegeneration by overexpressing an untranslated CAG repeat mRNA in
Drosophila. Surprisingly,
overexpression of MBNL1 exacerbated the effect, while downregulation attenuated the CAG induced neurodegeneration – an effect opposite to that observed with MBNL1 sequestration in the DM model. This study was not only important in demonstrating that RNA toxicity may be a component spinocerebellar ataxia 3 (SCA3), traditionally thought to be strictly a polyglutamine disorder, but also suggested that MBL1 may have distinct roles in disease pathogenesis depending on the particular trinucleotide expansion. Finally, in contrast to its involvement in myotonic dystrophy, MBNL1 did not lead to mis-splicing of a target reporter construct, suggesting a distinct pathogenic mechanism in CAG RNA-induced neurodegeneration. (
54)
Another significant finding was the absence of any single, predominant protein species in the inclusions. (
31) This argues against a mechanism in which the mass accumulation of one or more specific proteins leads to inclusion formation and cell death; a result that stands in contrast to Huntington disease (huntingtin), the tauopathies (tau protein), or Parkinson disease (α-synuclein). (
29,
31) In addition, very few of the isolated proteins were found to be ubiquitinated, with no evidence of polyubiquitination; a result that stands in contrast to other neurodegenerative disorders in which accumulation of ubiquitinated, aberrant protein species in inclusions is thought to overwhelm the proteasomal degradation pathway.
(review: 55) However, it is possible that accumulation of a protein in the inclusions in even small quantities could be triggering downstream pathways leading to cell death. (
31)
The case for mRNA toxicity in FXTAS was further strengthened through the creation of a 98 CGG knock-in mouse. (
38,
44) Using homologous recombination, those researchers inserted a human 98 CGG repeat into the 5′UTR of the mouse
FMR1 gene to study the stability and methylation of the allele, as well as the pathogenesis. Through selective breeding, mice were produced with varying numbers of repeats spanning the premutation range. Using real-time PCR, they found 2 to 3.5-fold elevated
FMR1 mRNA in brain compared to wild type mice, consistent with the situation in humans. (
46) Although no gross abnormalities were observed in 20-72 week old premutation mice, ubiquitin-positive inclusions were widely distributed throughout the brains. The inclusions were only observed in nuclei and, in contrast to post mortem brains from FXTAS patients, none was seen in astrocytes. (
38)
Another important focus of the mouse study was on the biological components of the intranuclear inclusions. Using immunohistochemistry, Willemsen and co-workers (
38) did not see any FMRP in the inclusions; however they did find heat shock protein HSP40, and the 20S catalytic complex of the proteasome. They also found the 20S complex co-localized with ubiquitin in many of the inclusions. However, many other proteins involved in neurodegenerative disorders, including MAP2, tyrosine tubulin, MAP1B, actin, SUMO1, GFAP, TAU, neurofilament, nucleolin, HSP27, HSP60, and HSP72, did not co-stain with inclusions, which suggests novel neuropathogenic processes in the FXTAS mouse model. (
29,
38)