Search tips
Search criteria 


Logo of genbioBioMed CentralBiomed Central Web Sitesearchsubmit a manuscriptregisterthis articleGenome BiologyJournal Front Page
Published online 2009 October 1. doi: 10.1186/gb-2009-10-10-r103

Table 2

ALLPATHS, Velvet and EULER assemblies of five microbial genomes: contiguity

Contig N50 (kb)
 S. aureus4778768
 E. coli3376219
 R. sphaeroides1561513
 S. pombe515524
 N. crassa191614
Scaffold N50 (kb)
 S. aureus61156268
 E. coli2,68029819
 R. sphaeroides8581,1263
 S. pombe22242224
 N. crassa5818614

For five genomes, statistics from ALLPATHS, Velvet, and EULER assemblies are shown. Contiguity refers to contig and scaffold N50 values.