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Are algal genes in nonphotosynthetic protists evidence of historical plastid endosymbioses?
John W Stiller, Jinling Huang, Qin Ding, Jing Tian, Carol Goodwillie
BMC Genomics. 2009; 10: 484. Published online 2009 October 20. doi: 10.1186/1471-2164-10-484
PMCID:
PMC2770532
Abstract Full Text PDF–1.0M Supplementary Material
 Is Cited by the Following 10 Articles in this Archive:
Chlorophyll-binding proteins revisited - a multigenic family of light-harvesting and stress proteins from a brown algal perspective
Simon M Dittami, Gurvan Michel, Jonas Collén, Catherine Boyen, Thierry Tonon
BMC Evol Biol. 2010; 10: 365. Published online 2010 November 26. doi: 10.1186/1471-2148-10-365
PMCID:
PMC3008699
Abstract Full Text PDF–1.7M Supplementary Material
Gene Gain and Loss during Evolution of Obligate Parasitism in the White Rust Pathogen of Arabidopsis thaliana
Eric Kemen, Anastasia Gardiner, Torsten Schultz-Larsen, Ariane C. Kemen, Alexi L. Balmuth, Alexandre Robert-Seilaniantz, Kate Bailey, Eric Holub, David J. Studholme, Dan MacLean, Jonathan D. G. Jones
PLoS Biol. 2011 July; 9(7): e1001094. Published online 2011 July 5. doi: 10.1371/journal.pbio.1001094
PMCID:
PMC3130010
Abstract Full Text PDF–1.5M Supplementary Material
Experimental design and statistical rigor in phylogenomics of horizontal and endosymbiotic gene transfer
John W Stiller
BMC Evol Biol. 2011; 11: 259. Published online 2011 September 16. doi: 10.1186/1471-2148-11-259
PMCID:
PMC3190393
Abstract Full Text PDF–1.1M
Red and Problematic Green Phylogenetic Signals among Thousands of Nuclear Genes from the Photosynthetic and Apicomplexa-Related Chromera velia
Christian Woehle, Tal Dagan, William F. Martin, Sven B. Gould
Genome Biol Evol. 2011; 3: 1220–1230. Published online 2011 September 28. doi: 10.1093/gbe/evr100
Correction in:
Genome Biol Evol. 2012; 4(4): 617.
PMCID:
PMC3205606
Abstract Full Text PDF–822K Correction
An extended phylogenetic analysis reveals ancient origin of "non-green" phosphoribulokinase genes from two lineages of "green" secondary photosynthetic eukaryotes: Euglenophyta and Chlorarachniophyta
Yi Yang, Shinichiro Maruyama, Hiroyuki Sekimoto, Hidetoshi Sakayama, Hisayoshi Nozaki
BMC Res Notes. 2011; 4: 330. Published online 2011 September 7. doi: 10.1186/1756-0500-4-330
PMCID:
PMC3224528
Abstract Full Text PDF–1.0M Supplementary Material
Do Red and Green Make Brown?: Perspectives on Plastid Acquisitions within Chromalveolates
Richard G. Dorrell, Alison G. Smith
Eukaryot Cell. 2011 July; 10(7): 856–868. doi: 10.1128/EC.00326-10
PMCID:
PMC3147421
Abstract Full Text PDF–2.2M
Reconstruction of Oomycete Genome Evolution Identifies Differences in Evolutionary Trajectories Leading to Present-Day Large Gene Families
Michael F. Seidl, Guido Van den Ackerveken, Francine Govers, Berend Snel
Genome Biol Evol. 2012; 4(3): 199–211. Published online 2012 January 9. doi: 10.1093/gbe/evs003
PMCID:
PMC3318443
Abstract Full Text PDF–959K
Ancient gene transfer from algae to animals: Mechanisms and evolutionary significance
Ting Ni, Jipei Yue, Guiling Sun, Yong Zou, Jianfan Wen, Jinling Huang
BMC Evol Biol. 2012; 12: 83. Published online 2012 June 12. doi: 10.1186/1471-2148-12-83
PMCID:
PMC3494510
Abstract Full Text PDF–2.1M Supplementary Material
Re-evaluating the Green versus Red Signal in Eukaryotes with Secondary Plastid of Red Algal Origin
Fabien Burki, Pavel Flegontov, Miroslav Oborník, Jaromír Cihlář, Arnab Pain, Julius Lukeš, Patrick J. Keeling
Genome Biol Evol. 2012; 4(6): 738–747. Published online 2012 May 16. doi: 10.1093/gbe/evs049
PMCID:
PMC3516247
Abstract Full Text PDF–333K
Dynamics and Innovations within Oomycete Genomes: Insights into Biology, Pathology, and Evolution
Howard S. Judelson
Eukaryot Cell. 2012 November; 11(11): 1304–1312. doi: 10.1128/EC.00155-12
PMCID:
PMC3486027
Abstract Full Text PDF–1.4M