Search tips
Search criteria 


Logo of patsIssue Featuring ArticlePublisher's Version of ArticleSubmissionsAmerican Thoracic SocietyAmerican Thoracic SocietyProceedings of the American Thoracic Society
Proc Am Thorac Soc. 2005 December; 2(5): 403–411.
PMCID: PMC2713330

Innate Immunity in the Lungs


Innate immunity is a primordial system that has a primary role in lung antimicrobial defenses. Recent advances in understanding the recognition systems by which cells of the innate immune system recognize and respond to microbial products have revolutionized the understanding of host defenses in the lungs and other tissues. The innate immune system includes lung leukocytes and also epithelial cells lining the alveolar surface and the conducting airways. The innate immune system drives adaptive immunity in the lungs and has important interactions with other systems, including apoptosis pathways and signaling pathways induced by mechanical stretch. Human diversity in innate immune responses could explain some of the variability seen in the responses of patients to bacterial, fungal, and viral infections in the lungs. New strategies to modify innate immune responses could be useful in limiting the adverse consequences of some inflammatory reactions in the lungs.

Keywords: endotoxin, innate immunity, lung inflammation, Toll-like receptors

The alveolar membrane is the largest surface of the body in contact with the outside environment. Like the skin and the gastrointestinal mucosa, the lungs are continuously exposed to a diverse array of microbes and organic and inorganic particulate materials. As life evolved, strategies were needed to recognize material from the outside environment, and to distinguish potentially harmful agents from most innocuous foreign material. Higher vertebrates have developed two interactive protective systems: the innate and adaptive immune systems. The innate immune system is older and consists of soluble proteins, which bind microbial products, and phagocytic leukocytes resembling primitive amebae, which float through the bloodstream and migrate into tissues at sites of inflammation, or reside in tissue waiting for foreign material. The innate immune system is always active and is immediately responsive, ready to recognize and inactivate microbial products entering the lungs and other tissues. Its specificity is relatively broad, and based on the recognition of common microbial motifs. Higher animals have evolved an adaptive immune system of lymphocytes that respond specifically to signals from the innate immune system by producing high-affinity antibodies to very specific peptide sequences presented on specialized antigen-presenting cells. These antibodies opsonize microbes and viruses and facilitate their destruction by leukocytes in tissue and lymph nodes. Cytokines and growth factors produced by macrophages and dendritic cells of the innate immune system drive the specialized antibody responses of the adaptive immune system. The adaptive immune system has a memory component lacking in the innate immune system. Together, the innate and the adaptive immune systems enable the host to react to the array of microbial and other products encountered in everyday life.

This article provides an overview of new developments in innate immunity and shows their relevance for lung antimicrobial defenses.


The innate immune system includes soluble proteins that bind to microbial products and leukocytes that ingest particulates and kill microorganisms (Table 1) (1). The understanding of innate immunity began in 1774, when leukocytes were first identified at sites of inflammation (reviewed in Reference 2). Over 100 yr later, in 1882, Metchnikov identified mobile ameboid cells in sea anemones that could ingest particulate dyes, and similar cells in water fleas that could engulf fungal spores. Suspecting that these cells might have a defensive function, he inserted a rose thorn into a starfish larva to show that the mobile cells accumulated around the foreign body. He named these cells phagocytes, meaning “devouring cells” in Greek. In addition, a series of host proteins have evolved that bind bacteria and their products, and facilitate recognition by receptor complexes on the surface of leukocytes and other cells. The modern understanding of innate immunity accelerated dramatically with recent discoveries about proteins that bind bacterial products, and the receptor systems used by leukocytes to recognize bacterial, fungal, and viral products.


It has been known for many years that circulating proteins are important in the recognition of bacterial products by leukocytes. For example, complement components bind to bacterial cell walls and facilitate bacterial uptake by leukocytes by the C3bi receptor. Serum is an excellent opsonin that promotes phagocytosis of bacteria by neutrophils, and heat inactivation, which destroys complement, eliminates this opsonic effect. The complement component C5a is a potent chemotactic factor that interacts with a specific receptor on neutrophils to facilitate directed migration of neutrophils toward sites of inflammation (3). The collectins are a group of related proteins that serve as opsonins for bacterial products in plasma and tissues. The collectins have a common structure, including a globular-like domain and a collagen-like tail, and include mannose-binding protein in serum, conglutinin, and the lung surfactant proteins SP-A and SP-D. Binding of collectins to the bacterial surface promotes phagocytosis by macrophages and neutrophils. Mannose- binding protein recognizes mannose on the bacterial surface, and activates the alternate complement pathway, leading to the accumulation of C3b on the microbial surface. Children with mannose-binding protein deficiency have defective opsonic function in serum despite normal levels of immunoglobulins and complement (4).

A great deal has been learned from the study of LPS binding protein (LBP), a prototypical protein that prepares LPS shed from the outer membrane of gram-negative bacteria for recognition by specific protein receptor complexes on leukocytes. LBP is produced in the liver as an acute-phase reactant, circulates in plasma in relatively high concentrations (μg/ml), and is widely distributed in tissue fluids. LBP binds the lipid A portion of LPS with high affinity (Kd in the nanomolar range) and 1:1 stoichiometry, and solubilizes LPS aggregates to form stable LBP:LPS complexes that are extremely potent in cellular activation (5). LPS also binds to high-density lipoproteins in plasma with relatively high affinity, and in this form LPS is biologically inactive (6). LPS also binds nonspecifically to other constituents of plasma, including albumin, immunoglobulins, and other proteins, but there is no evidence that this affects the biologic activity of LPS. Although LBP is derived primarily from the liver, extrahepatic production of LBP has been reported, including production by pulmonary artery smooth muscle cells and type II pneumocytes in alveolar walls (7, 8).

Following the description of LBP, a search began to determine whether LBP:LPS complexes interacted with a specific receptor on leukocytes. Studies using LBP-coated erythrocytes and a panel of blocking monoclonal antibodies established that leukocytes recognize LBP:LPS complexes by the CD14 receptor on the cell surface (9), which was originally described as a monocyte differentiation antigen. As mononuclear cells mature, they express increasing amounts of CD14, and at the same time, they become steadily more responsive to LBP:LPS complexes (10). CD14 is anchored in the cell membrane by a glycosylphosphatidylinositol group and is shed from the cell membrane where it accumulates in tissue fluids and plasma. LBP transfers LPS to soluble CD14 and soluble LPS:CD14 complexes mediate LPS responsiveness by endothelial cells and other cells that do not bear much membrane CD14 (11). Soluble CD14 also enhances the binding of LPS to high-density lipoproteins, so plasma proteins can both enhance and reduce the bioactivity of LPS in plasma (12). Soon after the discovery of the role of CD14 in recognizing bacterial LPS it was recognized that CD14 was involved in the recognition of other bacterial products, and CD14 was designated as a pattern-recognition receptor (i.e., a receptor that recognizes common bacterial pattern motifs) (13). The observation that the membrane anchor portion of CD14 was not required for LPS-dependent cellular activation led to a search for one or more additional proteins that interact with CD14 to transduce signals into the cell.

The discovery of LBP in human plasma and the recognition of the critical role of the CD14 receptor for cellular activation by LPS were important clues to understanding microbial recognition mechanisms by the innate immune system. The next critical discovery came from the study of immunity in fruit flies. A family of proteins recognized to be important in embryonic dorsal ventral development in Drosophila were found to have a role in antifungal defenses (14). Medzhitov and colleagues found that one of these proteins, Drosophila Toll, had a human homolog (human Toll) that was a type 1 transmembrane protein whose intracellular portion was highly homologous with the interleukin (IL)-1 receptor (15). Activation of the human Toll molecule led to activation of nuclear factor (NF)-κB and the production of a variety of proinflammatory cytokines. At almost the same time, Poltorak and colleagues, using a genetic approach, discovered that mice naturally resistant to LPS had a mutation in the intracellular portion of a protein that was identical to murine Toll-4, and this established that Toll-4 was the signaling portion of the LPS receptor complex (16).

Subsequent studies showed that an additional protein, designated MD-2, was needed for full activation of Toll-4 by LBP:LPS complexes and membrane CD14 (17). The intracellular adaptor protein, MyD88, which was known to be important in intracellular signaling by the IL-1 receptor, was shown to be critical for TLR4-dependent signaling in response to LPS (18). Interestingly, the Toll receptors do not promote phagocytosis, but function in the membrane of the developing phagosome as receptors that sense what is being ingested, and initiate intracellular signaling (19). The importance of Toll-like receptors (TLRs) for innate immunity in human lungs was established when Arbour and colleagues found that humans with mutations in the extracellular portion of TLR4 were hyporesponsive to inhaled LPS (20). Subsequently, humans with TLR4 mutations were shown to be relatively protected against progression of atherosclerosis, providing a role for innate immunity in vascular disease (21).

Ten human TLRs have been identified in humans and a number of important principles have emerged. The first is that the TLRs recognize an array of bacterial, fungal, and viral products, including structural molecules in the microbial cell wall like LPS and lipoteichoic acid, secreted proteins like lipoproteins, unmethylated bacterial DNA, and double-stranded viral RNA (Table 2). For example, TLR2 recognizes gram-positive lipoteichoic acids, TLR4 recognizes gram-negative LPS, TLR5 recognizes flagellin, and TLR9 recognizes unmethylated bacterial DNA. A second principle is that cooperativity among TLRs provides a combinatorial mechanism to cope with the array of microbial products in nature. Although single TLRs recognize some bacterial products, TLRs combine together to increase the diversity of bacterial ligands that can be sensed by host cells.


A third principle is that all of the known TLRs signal via their intracellular tails by activating a cascade of intracellular kinases, leading to diverse gene expression. The intracellular portion of each known TLR contains a TIR domain (Toll–IL-1 receptor motif). Five different cytoplasmic adaptor proteins bind to the different TLRs and initiate intracellular signaling. These include myeloid differentiation factor 88 (MyD88), MyD88 adaptor-like protein (MAL) (Tirap), Toll receptor–associated activator of interferon (TRIF) (Ticam-1), MyD88-4 (Toll receptor–associated molecule [TRAM], and MyD88-5 (1). The signaling pathway involves recruitment and activation of IL-1 receptor-associated kinase (IRAK)-4, which phosphorylates IRAK-1 and IRAK-2. Activation of TNF receptor–associated factor (TRAF)-6 and TGF-β activated kinase (TAK)-1 leads to phosphorylation of I-kappa kinase (IKK)-γ and the phosphorylation and degradation of IκB, resulting in translocation of NF-κB to the nucleus and the transcription of a large number of proinflammatory and antiinflammatory gene products. IRAK-4 and TAK-1 also activate p38 mitogen-activated protein kinase and c-Jun N-terminal kinase (JNK), leading to broad intracellular kinase activation.

Signaling through some TLRs, like TLR4, is enhanced by additional membrane proteins like CD14 and MD-2. The MD-2 protein is an essential component of the CD-14–TLR4 signaling complex that is expressed in many different tissues, including the lungs (22). Like CD14, MD-2 is shed into plasma and circulating MD-2 is increased in patients with sepsis (23). The MyD88 intracellular adaptor mediates signaling through all of the known TLR receptors except TLR3, although its importance for individual TLRs varies. Mice deficient in MyD88 are highly susceptible to bacterial infections, particularly gram-negative infections (24). A fourth important principle is that membrane TLRs are not limited to leukocytes, but are found on the surface of somatic cells, such as airway and alveolar epithelial cells. The presence of TLR receptors on nonmyeloid cells broadens the cellular diversity of the innate immune system.

Beutler and coworkers have used “forward genetics” in mice to identify key components of the signaling pathways for the known murine TLRs (25). Germline mutations have been induced in mice by exposure to the mutagen N-ethyl-N-nitrosourea. By inbreeding progeny, rare nonlethal mutations in innate immunity pathways have been identified by exposing peritoneal macrophages to known TLR agonists and measuring tumor necrosis factor α (TNF-α) in a high throughput assay. This approach has led to the discovery of a number of key intermediates in TLR signaling, including two different pathways that diverge from TLR-4, designated LPS-1 and LPS-2. These two pathways are believed to account for all cellular activation by LPS (Figure 1) (26). The LPS-1 pathway is the classical LPS signaling pathway in leukocytes and is mediated by the MyD88 intracellular adapter molecule. The LPS-1 pathway activates the enzyme intermediates of the IL-1 receptor pathway, including IRAK4 and IRAK1, and leads to rapid NF-κB activation with the production of an array of proinflammatory cytokines, including IL-1, IL-6, IL-8, and the counterregulatory cytokine IL-10. By contrast, the LPS-2 pathway is mediated by different intracellular adapter proteins named TRAM and TRIF and produces slower and sustained activation of interferon (IFN) response elements with the production of Type I IFNs and the induction of inducible nitric oxide synthase. Although many of the intracellular signaling events are common among the various TLRs, increasing evidence suggests that important differences in intracellular signaling pathways exist. An important question is whether relatively specific inhibitors can be developed that block or dampen signaling through some TLR pathways without affecting others.

Figure 1.
Simplified diagram of some Toll-like receptor (TLR) signaling pathways. Flagellin binds to TLR5; lipoproteins bind to cooperative clusters of TLR2, -1, and -6; LPS binds to the complex formed by CD14, MD-2, and TLR4; and bacterial DNA binds to TLR9, which ...

The innate immune system has a critical role in activating and coordinating the adaptive immune system (reviewed in Reference 27). Macrophages and dendritic cells in tissue process microbial antigens and present them in association with class I and class II molecules to responding T lymphocytes. Macrophage-derived IL-1 promotes lymphocyte proliferation, and IL-6 promotes B-cell growth and antibody production. The complement cascade and natural killer cells provide non–TLR-dependent mechanisms to activate adaptive immunity. In addition, the NOD proteins (nucleotide binding, oligomerization domains) serve as intracellular sensors of gram-positive peptidoglycans and directly activate NF-κB and the production of Type I IFNs (IFN-α and IFN-β) (28). LPS and other microbial products have well-known adjuvant effects for adaptive immunity, enhancing antibody production in response to microbial antigens. It seems that the LPS-2 pathway mediates the adjuvant effect of LPS, suggesting that the adjuvant effect of LPS is not completely dependent on the cytokine responses induced by LPS (29).


Innate immune mechanisms defend the air spaces from the array of microbial products that enter the lungs on a daily basis and are evident from the nasopharynx to the alveolar membrane. Large particles deposit in the nasopharynx and tonsillar regions when inertial forces carry them out of the bending airstream and against the posterior pharyngeal wall. Particles that are carried into the conducting airways sediment onto the mucociliary surface of the airways under the influence of gravity, where they encounter soluble constituents in airway fluids and the upward propulsive force of the mucociliary system. Particles 1 μm in size and smaller, the size of bacteria and viral particles, are carried to the alveolar surface where they interact with soluble components in alveolar fluids (e.g., IgG, complement, surfactant, and surfactant-associated proteins) and alveolar macrophages (Figure 2). Normally, alveolar macrophages account for approximately 95% of airspace leukocytes, with 1 to 4% lymphocytes and only about 1% neutrophils, so that the alveolar macrophage is the sentinel phagocytic cell of the innate immune system in the lungs. Other cells in the airways and alveolar environment can sense microbial products, because pattern recognition receptors in the TLR family are found on alveolar walls and the ciliated epithelium of the conducting airways (Figure 3).

Figure 2.
The alveolar environment in the lungs. Scanning electron micrograph of a rat lung showing the images of erythrocytes in the alveolar wall capillaries and two ruffled alveolar macrophages (MP) in the alveolar space (ALV). Alveolar macrophages make up approximately ...
Figure 3.
TLR2 and CD14 in the lungs of a rabbit. TLR2 is labeled red and CD14 is labeled green. Colocalization of TLR2 and CD14 is shown in yellow. TLR2 is visible on the alveolar epithelium and on alveolar macrophages in the airspace. CD14 is visible on alveolar ...

The soluble constituents of airway and alveolar fluids have an important role in innate immunity in the lungs. In the conducting airways, constituents of airway aqueous fluids include lysozyme, which is lytic to many bacterial membranes; lactoferrin, which excludes iron from bacterial metabolism; IgA and IgG; and defensins, which are antimicrobial peptides released from leukocytes and respiratory epithelial cells (30, 31). IgG is the most abundant immunoglobulin in alveolar fluids, and complement proteins and surfactant-associated proteins serve as additional microbial opsonins. In particular, SP-A and SP-D are members of the collectin family and promote phagocytosis of particulates by alveolar macrophages. Alveolar surfactant lipids and SP-A and SP-D bind LPS and prevent its interaction with LBP in alveolar fluids and the CD14:TLR4 complex on alveolar macrophages (32, 33). Alveolar fluids contain high concentrations of LBP and soluble CD14 (sCD14), which are key molecules in the recognition of LPS by alveolar macrophages and other cells in the alveolar environment (34, 35). LBP and sCD14 have molecular weights of approximately 60 and 50 kD, respectively, and probably diffuse from the plasma compartment into alveolar fluids much like albumin (molecular weight, 67 kD). LBP can be produced locally by type II pneumocytes, however, and LBP production has been reported in pulmonary artery smooth muscle cells in vitro (7, 8, 36). Soluble CD14 is released from the surface of alveolar macrophages by proteases, and this is enhanced by IL-6, which is abundant in the bronchoalveolar lavage (BAL) fluids of patients with lung injury (3739). Blood monocytes and newly recruited monocyte-macrophages express considerably more membrane CD14 than mature alveolar macrophages, so newly recruited cells are likely to be an additional source of soluble CD14 in alveolar fluids (40).

Alveolar macrophages are avidly phagocytic and ingest all types of inhaled particulates that reach the alveolar spaces. Remarkably, one of the primary roles of the alveolar macrophage is to keep the airspaces quiet, and they ingest large numbers of inert particulates like amorphous silicates and carbon-graphite particles without triggering inflammatory responses. When bacteria are opsonized by IgG, complement, or SP-A and SP-D in the airspaces, they are ingested by alveolar macrophages and the TLRs in the phagosomal membrane provide discrimination among the various microbial products entering the cell (19). The proinflammatory cytokines produced by macrophages, notably IL-8 and related CXC chemokines, initiate a localized inflammatory response by recruiting neutrophils from the lung capillary networks into the alveolar space. Alveolar macrophages are poor antigen-presenting cells, but carry microbial antigens into the interstitium and to regional lymph nodes where they are taken up by specialized dendritic cells and presented to responding lymphocytes to initiate adaptive immune responses. Alveolar macrophages also have an important role in producing CC chemokines, such as MCP-1 and RANTES (regulated on activation, normal T-cell expressed and secreted), which recruit activated monocytes and lymphocytes into sites of inflammation in the lungs.

Another important principle is that acute inflammation alters the set point for the induction of innate immune reactions in the lungs. Normally, the airspace environment is a relatively quiet place despite the array of microbial and other products that enter the airspaces by inhalation or subclinical oropharyngeal aspiration. Surfactant lipids and proteins are present in very high concentrations as compared with LBP and sCD14. Surfactant lipids, and SP-A and SP-D, bind LPS and reduce its biological effects (41). When inflammation occurs, the concentrations of SP-A and SP-D fall, whereas the concentrations of LBP and sCD14 rise markedly, enhancing the effects of LPS in lung fluids (42, 43). TLRs are expressed on alveolar and airway epithelial cells, but the responsiveness of these cells to LPS is limited because of low expression of membrane MD-2 (22, 44). CD14 is shed from macrophage membranes at sites of inflammation, in part by the action of proteases like matrix metalloproteinase (MMP)-9 and MMP-12 (37, 45). Innate immune responses in the airspaces initiate local inflammatory responses, and these inflammatory responses change the threshold for subsequent inflammatory responses to bacterial products entering the lungs.

Recent studies have defined an important role for airway epithelial cells in innate immune responses in the lungs (46). The airway epithelium restrains the growth of microbes in the conducting airways by several different mechanisms. The ciliated epithelial cells move fluid, mucus, and trapped particulates upward and out of the lungs. Airway fluids contain soluble proteins that contain bacterial growth, including lysozyme, lactoferrin, and the antimicrobial defensins. Airway epithelial cells express low levels of CD14 and TLR1-6 and -9, and sense bacteria in the mucociliary fluid by the same TLR-dependent mechanisms used by leukocytes. Engagement of pattern recognition receptors enhances the production of antimicrobial defensins by airway epithelial cells, and stimulates epithelial cells to produce CXC and CC chemokines, which recruit neutrophils into the airway lumen (31). Airway epithelial cells produce IL-1β, IL-6, IL-8, RANTES, granulocyte-macrophage colony–stimulating factor, and transforming growth factor β, in addition to other proinflammatory cytokines (46). Airway epithelial cells also recognize unmethylated bacterial DNA by membrane TLR-9, leading to NF-κB activation and production of IL-6, IL-8, and β2-defensin in the airways (47). Skerrett and coworkers have shown that mice expressing a dominant negative IκB construct in distal airway epithelial cells, which prevents NF-κB activation, do not recruit PMNs normally into the airways in response to inhaled LPS (48). This experiment verifies the importance of LPS recognition by distal airway epithelial cells in vivo, and shows that epithelium-derived cytokines are probably just as important as macrophage-derived cytokines in driving innate inflammatory responses in the airspaces. Alveolar macrophages probably have a considerable amount of help in initiating innate immune responses in the airspaces.

Despite the critical role of TLR family members in recognition of bacterial products in vitro, lung innate immune responses in vivo are very complex and more progress is needed in translating discoveries about innate immunity in simplified laboratory systems to lung antimicrobial defenses in vivo. Lung inflammatory gene expression in response to LPS is regulated by TLR4, and TLR4 mediates virtually all of the observed gene expression in response to inhaled gram-negative bacteria in mice (49). Although TLR4-deficient mice have blunted inflammatory responses to inhaled LPS, the clearance of live Escherichia coli from the lungs over 6 h is normal, supporting the redundancy of antibacterial defense mechanisms in the lungs (50). Furthermore, although the MyD88 adaptor has a key role in mediating intracellular signaling by most of the TLRs, the sensitivity of MyD88-deficient mice to bacterial infection differs by the organism studied. For example, MyD88 is critical for TLR4 and TLR2 signaling, yet whereas MyD88-deficient animals fail to clear gram-negative Pseudomonas aeruginosa from the lungs and die within 24 h of inhalation challenge, the same MyD88-deficient animals clear the gram-positive Staphylococcus aureus normally (Figure 4) (24). More precise information is needed about the roles of the different Toll pathways in models of respiratory infection in vivo.

Figure 4.
(A–D) Clearance of gram-positive and gram-negative bacteria from the lungs and spleens of mice deficient in the MyD88 intracellular adaptor protein, which mediates intracellular signaling from TLRs. Mice deficient in MyD88 had markedly impaired ...


Innate immune pathways have important intersections with other intracellular pathways, such as the mechanotransduction pathways activated by cellular stretch, and apoptosis pathways triggered by membrane death receptors, but the molecular mechanisms involved are not completely clear. Mechanical stretch stimulates cytokine production by human alveolar macrophages in vitro, and simultaneous exposure to LPS enhances this effect (51). Similarly, rat lungs produce proinflammatory cytokines when ventilated with large tidal volumes ex vivo, and pretreatment of the animals with intravenous LPS enhances the proinflammatory response to any given level of stretch (52). This effect is demonstrable in anesthetized rabbits ventilated with moderately high tidal volumes (15 ml/kg), which might occur locally in damaged lungs, or with tidal volumes commonly used in humans without clinical lung injury (10 ml/kg) (53, 54). Whereas LPS sensitizes the lungs to the effects of mechanical stretch, additional evidence suggests that mechanical stretch can sensitize the lungs to bacterial products by enhancing innate immune pathways. When anesthetized rabbits were ventilated with large tidal volumes (20 ml/kg), CD14 expression increased in lung tissues, and the alveolar macrophages recovered by BAL had increased responsiveness to LPS in vitro (55). These bidirectional effects of mechanical stretch and LPS-dependent cellular activation raise the possibility that lessening mechanical stretch in the lungs and also blocking the effects of LPS are two complementary strategies to protect ventilated patients from lung injury. Consistent with this interpretation, the ARDSnet clinical trials have shown that reducing tidal volumes in humans with lung injury is associated with improved clinical outcome and with less systemic inflammation (56, 57). Manipulating innate immunity in humans at risk for ventilator-associated lung injury has not been tried.

Innate immunity pathways also intersect with receptor-mediated cell death pathways. Apoptosis can be triggered by a series of membrane receptors in the tumor necrosis factor receptor family, or by direct mitochondrial injury. The Fas pathway is activated when the membrane Fas receptor is clustered by Fas ligand on the surface of lymphocytes or soluble Fas ligand that is shed from the cell surface by the action of metalloproteinase, such as MMP-7 and others. The Fas pathway activates a sequence of caspases that lead to DNA cleavage and controlled cell death, but Fas pathway intermediates also are involved in NF-κB activation in some cells (58). Mice with a naturally occurring inactivating mutation in Fas have a blunted proinflammatory response to intrapulmonary LPS (59). Overexpression of a key intracellular adaptor protein (Fas-associated death domain [FADD]) suppresses LPS-induced signaling through TLR-4 (60). Fas-associated death domain is known to associate with the intracellular portion of Fas, where it activates Fas-dependent apoptosis. In the current paradigm, FADD also can associate with the TLR4 adapter MyD88, and suppress TLR4-mediated signaling (58). Activation of Fas is believed to draw FADD away from the TLR4 signaling complex and enhance TLR4 signaling, so that death signals potentiate inflammatory signals in response to bacterial products.


Innate immune responses are very diverse in humans. Clinicians realize that some patients tolerate relatively severe infections and respond promptly to antibiotics and supportive care, whereas others rapidly develop septic shock. It has been found consistently that there is a wide range of cytokine concentrations in the BAL fluid of patients with acute lung injury (39). Although the causes of acute lung injury are heterogeneous and the time when patients reach medical care after the onset of symptoms varies, inherent differences in the activation of innate immune pathways also are likely to be important. Wurfel and colleagues have used a simple assay in which whole blood is incubated with LPS or other bacterial products to create an intermediate cytokine response phenotype to study the distribution of innate immune responses in the normal population (61). By ranking individuals according to the production of a number of different proinflammatory cytokines, subgroups of consistently high or consistently low responders can be identified (Figure 5). Gene expression analysis identified clusters of common genes expressed in the high and the low responders to LPS. The high responders tended to activate regulators of cytokine production more rapidly, whereas the lower responders preferentially activated IFN-responsive pathways. In addition, there are strong suggestions that innate immune responsiveness is an inheritable trait, providing further support for the possibility that subjects with high or low responsiveness might be identifiable before the onset of illness. For example, the family members of patients with severe meningococcal sepsis who died were more likely to produce lower levels of TNF-α and higher levels of IL-10 when their blood was stimulated with LPS ex vivo, and point mutations in the TLR4 gene are linked with susceptibility to severe meningococcemia (62, 63). In a study of monozygotic and dizygotic twins, the heritability of LPS-induced cytokine responses exceeded 50% for TNF-α responses and 80% for IL-1β responses (64).

Figure 5.
High- and low-response phenotypes in the human population using LPS as the defined stimulus in whole blood ex vivo. Peripheral venous blood from normal human volunteers was stimulated with LPS (10 ng/ml) for 6 h and cytokines were measured in the plasma ...


Great progress has been made in the last decade in understanding the molecular basis of innate immunity and the relevance of these discoveries for lung defenses. The important clinical question now is whether strategies should be developed to manipulate innate immunity in the clinical setting. Until the late 19th century, inflammation was viewed as harmful, and pus formation at the site of a wound was a bad omen (2). Metchnikoff recognized that phagocytes might have a defensive role in ingesting and digesting microbes. Now it is recognized that innate immunity is critical in defending the host from microbial invasion, but at the same time it is known that innate immune reactions can directly and indirectly damage tissues. Striking the right balance at the right time is one of the great clinical challenges in managing innate immunity. The key questions are whether one should enhance or inhibit innate immunity, and if so, at what point in a clinical illness, particularly when the host was normal before the illness began.

Several strategies to enhance innate immunity have been tried in normal subjects, including using granulocyte colony–stimulating factor to increase the number and activation state of circulating neutrophils, and IFN-γ to enhance macrophage-dependent immunity. When granulocyte colony–stimulating factor was used to enhance immunity in nonneutropenic patients with community-acquired pneumonia, the number of circulating neutrophils increased dramatically, but there was no improvement in clinical outcome (65). Interestingly, this strategy did not increase the extent of lung injury that was seen, and the chest radiographs actually improved slightly faster in the treated patients. Granulocyte colony–stimulating factor did not improve the outcome of patients with pneumonia and severe sepsis (66). IFN-γ has been proposed as a treatment to improve the systemic inflammatory downregulation that occurs after the onset of sepsis. It has been shown to improve markers of macrophage activation in patients with sepsis, but beneficial effects on clinical outcome in humans have yet been proved (67). Direct manipulation of TLR responsiveness has not yet been tried in humans with serious infections. In a model of severe E. coli pneumonia and sepsis in rabbits, intravenous treatment with an anti-CD14 antibody improved systemic hemodynamics and reduced nitric oxide production, but it worsened lung bacterial clearance in non–antibiotic-treated animals (68). This experiment supports the paradigm that local innate immunity pathways are critical for host responses to the bacterial infection, but that systemic innate immune responses are deleterious for the host. A reasonable strategy that merits testing is to use appropriate antibiotics to control bacterial growth at the local site of infection, and block systemic innate immune pathways to protect the systemic compartment of the host.

An additional strategy might be to inhibit innate immunity to prevent the sensitizing effects of innate immunity pathways on other stimuli, such as mechanical stretch in patients at risk for ventilator-induced lung injury. Because bacterial products, such as LPS, are commonly present in the lower airways of intubated patients (35), it might be possible to reduce the incidence or outcome of ventilator-induced lung injury by carefully reducing the responsiveness of lung innate immune pathways to aspirated bacterial products for a limited period of time. An antibody to TLR4 protects mice from the inflammatory effects of LPS in the lungs (69). The effect of this strategy on the synergistic effects of bacterial products and mechanical ventilation merits further study.

Effective innate immunity is critical for humans to resist the myriad microbes and microbial products encountered in daily life. The discovery of penicillin showed the lifesaving effects of using drugs to destroy bacteria. Whether further ground can be gained by manipulating innate immunity is an important question waiting to be answered.


Supported in part by the Medical Research Service of the U.S. Department of Veterans Affairs and by grants HL73996, GM37696, and HL65892 from the National Institutes of Health.

Conflict of Interest Statement: T.R.M. is a coinvestigator on a grant for $25,000 from Novimmune to study innate immunity and mechanical ventilation. He receives no personal compensation for this work. C.W.F. is a coinvestigator on a grant from Novimmune to study innate immunity and mechanical ventilation. He receives no personal compensation for this work.


1. Beutler B. Innate immunity: an overview. Mol Immunol 2004;40:845–859. [PubMed]
2. Silverstein AM. History of immunology: cellular versus humoral immunity: determinants and consequences of an epic 19th century battle. Cell Immunol 1979;42:208–221. [PubMed]
3. Guo RF, Ward PA. Role of C5a in inflammatory responses. Annu Rev Immunol 2005;23:821–852. [PubMed]
4. Super M, Thiel S, Lu J, Levinsky RJ, Turner MW. Association of low levels of mannan-binding protein with a common defect of opsonisation. Lancet 1989;2:1236–1239. [PubMed]
5. Schumann RR, Leong SR, Flaggs GW, Gray PW, Wright SD, Mathison JC, Tobias PS, Ulevitch RJ. Structure and function of lipopolysaccharide binding protein. Science 1990;249:1429–1431. [PubMed]
6. Wurfel MM, Wright SD. Lipopolysaccharide (LPS) binding protein catalyzes binding of LPS to lipoproteins. Prog Clin Biol Res 1995;392:287–295. [PubMed]
7. Wong HR, Pitt BR, Su GL, Rossignol DP, Steve AR, Billiar TR, Wang SC. Induction of lipopolysaccharide-binding protein gene expression in cultured rat pulmonary artery smooth muscle cells by interleukin 1 beta. Am J Respir Cell Mol Biol 1995;12:449–454. [PubMed]
8. Dentener MA, Vreugdenhil AC, Hoet PH, Vernooy JH, Nieman FH, Heumann D, Janssen YM, Buurman WA, Wouters EF. Production of the acute-phase protein lipopolysaccharide-binding protein by respiratory type II epithelial cells: implications for local defense to bacterial endotoxins. Am J Respir Cell Mol Biol 2000;23:146–153. [PubMed]
9. Wright SD, Ramos RA, Tobias PS, Ulevitch RJ, Mathison JC. CD14, a receptor for complexes of lipopolysaccharide (LPS) and LPS binding protein. Science 1990;249:1431–1433. [PubMed]
10. Martin TR, Mongovin SM, Tobias PS, Mathison JC, Moriarty AM, Leturcq DJ, Ulevitch RJ. The CD14 differentiation antigen mediates the development of endotoxin responsiveness during differentiation of mononuclear phagocytes. J Leukoc Biol 1994;56:1–9. [PubMed]
11. Pugin J, Shurer-Maly C-C, Leturcq D, Moriarty A, Ulevitch RJ, Tobias PS. Lipopolysaccharide activation of human endothelial and epithelial cells is mediated by lipopolysaccharide-binding protein and soluble CD14. Proc Natl Acad Sci USA 1993;90:2744–2748. [PubMed]
12. Wurfel MM, Hailman E, Wright SD. Soluble CD14 acts as a shuttle in the neutralization of lipopolysaccharide (LPS) by LPS-binding protein and reconstituted high density lipoprotein. J Exp Med 1995;181:1743–1754. [PMC free article] [PubMed]
13. Pugin J, Heumann ID, Tomasz A, Kravchenko VV, Akamatsu Y, Nishijima M, Glauser MP, Tobias PS, Ulevitch RJ. CD14 is a pattern recognition receptor. Immunity 1994;1:509–516. [PubMed]
14. Lemaitre B, Nicolas E, Michaut L, Reichhart JM, Hoffmann JA. The dorsoventral regulatory gene cassette spatzle/Toll/cactus controls the potent antifungal response in Drosophila adults. Cell 1996;86:973–983. [PubMed]
15. Medzhitov R, Preston-Hurlburt P, Janeway CAJ. A human homologue of the Drosophila Toll protein signals activation of adaptive immunity. Nature 1997;388:394–397. [PubMed]
16. Poltorak A, He X, Smirnova I, Liu MY, Huffel CV, Du X, Birdwell D, Alejos E, Silva M, Galanos C, et al. Defective LPS signaling in C3H/HeJ and C57BL/10ScCr mice: mutations in Tlr4 gene. Science 1998;282:2085–2088. [PubMed]
17. Shimazu R, Akashi S, Ogata H, Nagai Y, Fukudome K, Miyake K, et al. MD-2, a molecule that confers lipopolysaccharide responsiveness on Toll-like receptor 4. J Exp Med 1999;189:1777–1782. [PMC free article] [PubMed]
18. Medzhitov R, Preston-Hurlburt P, Kopp E, Stadlen A, Chen C, Ghosh S, Janeway CAJ. MyD88 is an adaptor protein in the hToll/IL-1 receptor family signaling pathways. Mol Cell 1998;2:253–258. [PubMed]
19. Underhill DM, Ozinsky A, Hajjar AM, Stevens A, Wilson CB, Bassetti M, Aderem A. The Toll-like receptor 2 is recruited to macrophage phagosomes and discriminates between pathogens. Nature 1999;401:811–815. [PubMed]
20. Arbour NC, Lorenz E, Schutte BC, Zabner J, Kline JN, Jones M, Frees K, Watt JL, Schwartz DA. TLR4 mutations are associated with endotoxin hyporesponsiveness in humans. Nat Genet 2000;25:187–191. [PubMed]
21. Kiechl S, Lorenz E, Reindl M, Wiedermann CJ, Oberhollenzer F, Bonora E, Willeit J, Schwartz DA. Toll-like receptor 4 polymorphisms and atherogenesis. N Engl J Med 2002;347:185–192. [PubMed]
22. Kajikawa O, Frevert CW, Lin SM, Goodman RB, Mongovin SM, Wong V, Ballman K, Daubeuf B, Elson G, Martin TR. Gene expression of Toll-like receptor-2, Toll-like receptor-4, and MD2 is differentially regulated in rabbits with Escherichia coli pneumonia. Gene 2005;344:193–202. [PubMed]
23. Pugin J, Stern-Voeffray S, Daubeuf B, Matthay MA, Elson G, Dunn- Siegrist I. Soluble MD-2 activity in plasma from patients with severe sepsis and septic shock. Blood 2004;104:4071–4079. [PubMed]
24. Skerrett SJ, Liggitt HD, Hajjar AM, Wilson CB. Cutting edge: myeloid differentiation factor 88 is essential for pulmonary host defense against Pseudomonas aeruginosa but not Staphylococcus aureus. J Immunol 2004;172:3377–3381. [PubMed]
25. Beutler B. The Toll-like receptors: analysis by forward genetic methods. Immunogenetics 2005;57:1–8. [PubMed]
26. Hoebe K, Du X, Georgel P, Janssen E, Tabeta K, Kim SO, Goode J, Lin P, Mann N, Mudd S, et al. Identification of Lps2 as a key transducer of MyD88-independent TIR signaling. Nature 2003;424:743–748. [PubMed]
27. Hoebe K, Janssen E, Beutler B. The interface between innate and adaptive immunity. Nat Immunol 2004;5:971–974. [PubMed]
28. Inohara N, Nunez G. NODs: intracellular proteins involved in inflammation and apoptosis. Nat Rev Immunol 2003;3:371–382. [PubMed]
29. Hoebe K, Janssen EM, Kim SO, Alexopoulou L, Flavell RA, Han J, Beutler B. Upregulation of costimulatory molecules induced by lipopolysaccharide and double-stranded RNA occurs by Trif-dependent and Trif-independent pathways. Nat Immunol 2003;4:1223–1229. [PubMed]
30. Lehrer RI. Primate defensins. Nat Rev Microbiol 2004;2:727–738. [PubMed]
31. Becker MN, Diamond G, Verghese MW, Randell SH. CD14-dependent lipopolysaccharide-induced beta-defensin-2 expression in human tracheobronchial epithelium. J Biol Chem 2000;275:29731–29736. [PubMed]
32. Borron P, McIntosh JC, Korfhagen TR, Whitsett JA, Taylor J, Wright JR. Surfactant-associated protein A inhibits LPS-induced cytokine and nitric oxide production in vivo. Am J Physiol Lung Cell Mol Physiol 2000;278:L840–L847. [PubMed]
33. Sano H, Chiba H, Iwaki D, Sohma H, Voelker DR, Kuroki Y. Surfactant proteins A and D bind CD14 by different mechanisms. J Biol Chem 2000;275:22442–22451. [PubMed]
34. Martin TR, Mathison JC, Tobias PS, Leturcq DJ, Moriarty AM, Maunder RJ, Ulevitch RJ. Lipopolysaccharide binding protein enhances the responsiveness of alveolar macrophages to bacterial lipolysaccharide: implications for cytokine production in normal and injured lungs. J Clin Invest 1992;90:2209–2219. [PMC free article] [PubMed]
35. Martin TR, Rubenfeld GD, Ruzinski JT, Goodman RB, Steinberg KP, Leturcq DJ, Moriarty AM, Raghu G, Baughman RP, Hudson LD. Relationship between soluble CD14, lipopolysaccharide binding protein, and the alveolar inflammatory response in patients with acute respiratory distress syndrome. Am J Respir Crit Care Med 1997;155:937–944. [PubMed]
36. Su GL, Freeswick PD, Geller DA, Wang Q, Shapiro RA, Wan YH, Billiar TR, Tweardy DJ, Simmons RL, Wang SC. Molecular cloning, characterization, and tissue distribution of rat lipopolysaccharide binding protein: evidence for extrahepatic expression. J Immunol 1994;153:743–752. [PubMed]
37. Lin SM, Frevert CW, Kajikawa O, Wurfel MM, Ballman K, Mongovin S, Wong VA, Selk A. Martin TR. Differential regulation of membrane CD14 expression and endotoxin-tolerance in alveolar macrophages. Am J Respir Cell Mol Biol 2004;31:162–170. [PubMed]
38. Hasday JD, Dubin W, Mongovin S, Goldblum SE, Swoveland P, Leturcq DJ, Moriarty AM, Bleeker ER, Martin TR. Bronchoalveolar macrophage CD14 expression: shift between the membrane-associated and soluble pools. Am J Physiol Lung Cell Mol Physiol 1997;272:L925–L933. [PubMed]
39. Park WY, Goodman RB, Steinberg KP, Ruzinski JT, Radella F, Park DR, Pugin J, Skerrett SJ, Hudson LD, Martin TR. Cytokine balance in the lungs of patients with acute respiratory distress syndrome. Am J Respir Crit Care Med 2001;164:1896–1903. [PubMed]
40. Maus U, Herold S, Muth H, Maus R, Ermert L, Ermert M, Weissmann N, Rosseau S, Seeger W, Grimminger F, et al. Monocytes recruited into the alveolar air space of mice show a monocytic phenotype but upregulate CD14. Am J Physiol Lung Cell Mol Physiol 2001;280:L58–L68. [PubMed]
41. Martin TR. Recognition of bacterial endotoxin in the lungs. Am J Respir Cell Mol Biol 2000;23:128–132. [PubMed]
42. Martin TR, Rubenfeld GD, Ruzinski JT, Goodman RB, Steinberg KP, Leturcq DJ, Moriarty AM, Raghu G, Baughman RP, Hudson LD. Relationship between soluble CD14, lipopolysaccharide binding protein, and the alveolar inflammatory response in patients with acute respiratory distress syndrome. Am J Respir Crit Care Med 1997;155:937–944. [PubMed]
43. Greene KE, Wright JR, Steinberg KP, Ruzinski JT, Caldwell E, Wong WB, Hull W, Whitsett JA, Akino T, Kuroki Y, et al. Serial changes in surfactant-associated proteins in lung and serum before and after onset of ARDS. Am J Respir Crit Care Med 1999;160:1843–1850. [PubMed]
44. Jia HP, Kline JN, Penisten A, Apicella MA, Gioannini TL, Weiss J, McCray PB, Jr. Endotoxin responsiveness of human airway epithelia is limited by low expression of MD-2. Am J Physiol Lung Cell Mol Physiol 2004;287:L428–L437. [PubMed]
45. Senft AP, Korfhagen TR, Whitsett JA, Shapiro SD, LeVine AM. Surfactant protein-D regulates soluble CD14 through matrix metalloproteinase-12. J Immunol 2005;174:4953–4959. [PubMed]
46. Diamond G, Legarda D, Ryan LK. The innate immune response of the respiratory epithelium. Immunol Rev 2000;173:27–38. [PubMed]
47. Platz J, Beisswenger C, Dalpke A, Koczulla R, Pinkenburg O, Vogelmeier C, Bals R. Microbial DNA induces a host defense reaction of human respiratory epithelial cells. J Immunol 2004;173:1219–1223. [PubMed]
48. Skerrett SJ, Liggitt HD, Hajjar AM, Ernst RK, Miller SI, Wilson CB. Respiratory epithelial cells regulate lung inflammation in response to inhaled endotoxin. Am J Physiol Lung Cell Mol Physiol 2004;287:L143–L152. [PubMed]
49. Schurr JR, Young E, Byrne P, Steele C, Shellito JE, Kolls JK. Central role of Toll-like receptor 4 signaling and host defense in experimental pneumonia caused by gram-negative bacteria. Infect Immun 2005;73:532–545. [PMC free article] [PubMed]
50. Lee JS, Frevert CW, Matute-Bello G, Wurfel MM, Wong VA, Lin SM Ruzinski J, Mongovin S, Goodman RB, Martin TR. TLR-4 pathway mediates the inflammatory response but not bacterial elimination in E. coli pneumonia. Am J Physiol Lung Cell Mol Physiol 2005;289:L731–L738. [PubMed]
51. Pugin J, Dunn I, Jolliet P, Tassaux D, Magnenat J-L, Nicod LP, Chevrolet J-C. Activation of human macrophages by mechanical ventilation in vitro. Am J Physiol Lung Cell Mol Physiol 1999;275:L1040–L1050. [PubMed]
52. Tremblay L, Valenza F, Ribeiro S, Li J, Slutsky AS. Injurious ventilatory strategies increase cytokines and cfos mRNA in an isolated rat lung model. J Clin Invest 1997;5:944–952. [PMC free article] [PubMed]
53. Altemeier WA, Matute-Bello G, Frevert CW, Kawata Y, Kajikawa O, Martin TR, Glenny RW. Mechanical ventilation with moderate tidal volumes synergistically increases lung cytokine response to systemic endotoxin. Am J Physiol Lung Cell Mol Physiol 2004;287:L533–L542. [PubMed]
54. Bregeon F, Delpierre S, Chetaille B, Kajikawa O, Martin TR, Utillo-Touati A, Jammes Y, Pugin J. Mechanical ventilation affects lung function and cytokine production in an experimental model of endotoxemia. Anesthesiology 2005;102:331–339. [PubMed]
55. Moriyama K, Ishizaka A, Nakamura M, Kubo H, Kotani T, Yamamoto S, Ogawa EN, Kajikawa O, Frevert CW, Kotake Y, et al. Enhancement of the endotoxin recognition pathway by ventilation with a large tidal volume in rabbits. Am J Physiol Lung Cell Mol Physiol 2004;286:L1114–L1121. [PubMed]
56. NIH ARDSNet Group. Ventilation with lower tidal volumes as compared with traditional tidal volumes for acute lung injury and the acute respiratory distress syndrome. The Acute Respiratory Distress Syndrome Network. N Engl J Med 2000;342:1301–1308. [PubMed]
57. Parsons PE, Eisner MD, Thompson BT, Matthay MA, Ancukiewicz M, Bernard GR, Wheeler AP. Lower tidal volume ventilation and plasma cytokine markers of inflammation in patients with acute lung injury. Crit Care Med 2005;33:1–6. [PubMed]
58. Ma Y, Liu H, Tu-Rapp H, Thiesen HJ, Ibrahim SM, Cole SM, Pope RM. Fas ligation on macrophages enhances IL-1R1-Toll-like receptor 4 signaling and promotes chronic inflammation. Nat Immunol 2004;5:380–387. [PubMed]
59. Matute-Bello G, Winn RK, Martin TR, Liles WC. Sustained LPS-induced lung inflammation in mice is attenuated by functional deficiency of the Fas/Fas ligand system. Clin Diag Lab Immunol. 2004;11:358–361. [PMC free article] [PubMed]
60. Bannerman DD, Tupper JC, Kelly JD, Winn RK, Harlan JM. The Fas-associated death domain protein suppresses activation of NF-kappa B by LPS and IL-1 beta. J Clin Invest 2002;109:419–425. [PMC free article] [PubMed]
61. Wurfel MM, Park WY, Radella F, Ruzinski J, Sandstrom A, Strout J, Bumgarner RE, Martin TR. Identification of high and low responders to lipopolysaccharide in normal subjects: an unbiased approach to identify modulators of innate immunity. J Immunol 2005;175:2570–2578. [PubMed]
62. Westendorp RG, Langermans JA, Huizinga TW, Elouali AH, Verweij CL, Boomsma DI, Vandenbrouke JP. Genetic influence on cytokine production and fatal meningococcal disease. Lancet 1997;349:170–173. [PubMed]
63. Smirnova I, Mann N, Dols A, Derkx HH, Hibberd ML, Levin M, Beutler B. Assay of locus-specific genetic load implicates rare Toll-like receptor 4 mutations in meningococcal susceptibility. Proc Natl Acad Sci USA 2003;100:6075–6080. [PubMed]
64. de Craen AJ, Posthuma D, Remarque EJ, van den Biggelaar AH, Westendorp RG, Boomsma DI. Heritability estimates of innate immunity: an extended twin study. Genes Immun 2005;6:167–170. [PubMed]
65. Nelson S, Farkas S, Fotheringham N, Ho H, Marrie T, Movahhed H. Filgrastim in the treatment of hospitalized patients with community-acquired pneumonia (CAP) [abstract]. Am J Respir Crit Care Med 1996;153S:A536.
66. Wunderink R, Leeper K Jr, Schein R, Nelson S, DeBoisblanc B, Fotheringham N, Logan E. Filgrastim in patients with pneumonia and severe sepsis or septic shock. Chest 2001;119:523–529. [PubMed]
67. Docke WD, Randow F, Syrbe U, Krausch D, Khusru A, Reinke P, Volk HD, Koy W. Monocyte deactivation in septic patients: restoration by IFN-γ treatment. Nat Med 1997;3:678–681. [PubMed]
68. Frevert CW, Matute-Bello G, Skerrett SJ, Goodman RB, Kajikawa O, Sittipunt C, Martin TR. Effect of CD14 blockade in rabbits with Escherichia coli pneumonia and sepsis. J Immunol 2000;164:5439–5445. [PubMed]
69. Jeyaseelan S, Chu HW, Young SK, Freeman MW, Worthen GS. Distinct roles of pattern recognition receptors CD14 and Toll-like receptor 4 in acute lung injury. Infect Immun 2005;73:1754–1763. [PMC free article] [PubMed]
70. Beutler B. Inferences, questions and possibilities in Toll-like receptor signaling. Nature 2004;430:257–263. [PubMed]

Articles from Proceedings of the American Thoracic Society are provided here courtesy of American Thoracic Society