The molecular basis for prenyl pyrophosphate recognition by human Vγ2Vδ2 T cells is poorly understood due to the inability to identify an antigen presenting molecule or to measure binding of the Vγ2Vδ2 TCR to these compounds. We sought photoaffinity prenyl pyrophosphate antigens that would stably crosslink to the APC surface to aid in these studies. To achieve this goal, we have used
m/
p-BZ-(C)-C
5-OPP ester- and ether-linked photoaffinity analogs of FPP and HMBPP (
40). We had previously found that
m-BZ-C
5-OPP and
p-BZ-C
5-OPP were substrates for three bacterial prenyl transferases, and underwent efficient chain elongation to polyprenyl diphosphates (
40). We report here that these compounds also stimulate Vγ2Vδ2 T cells at lower concentrations than IPP. Recognition of the
m/
p-BZ-(C)-C
5-OPP ester- and ether-linked photoaffinity compounds was greatly affected by the type of linkage and the spacing from the benzophenone moiety and required the presence of the pyrophosphate moiety. Based on statin sensitivity and APC independence, recognition of
m/
p-BZ-(C)-C
5-OPP was clearly due to their direct antigenic activity rather than any ability to inhibit FPPS. Importantly,
m/
p-BZ-(C)-C
5-OPP antigens retained immunogenicity even after UV crosslinking to the APC surface. IPP and a non-stimulatory pyrophosphonate analog of BrHPP (BrHPCP) blocked the covalent crosslinking of
m-BZ-(C)-C
5-OPP to the APC cell surface suggesting that they bind to the same sites on the APC as do the
m-BZ-(C)-C
5-OPP antigens.
m-BZ-C
5-OPP was able to stably associate with the cell surface of human hematopoietic and non-hematopoietic cell lines, including ones lacking known antigen presenting molecules, for stimulation of Vγ2Vδ2 T cells. Thus, the molecule(s) that the photoaffinity antigens bind to are broadly distributed, functionally non-polymorphic, and not a known antigen presenting molecule.
Photoaffinity derivatives of antigens, GTP, and other ligands have been used to dissect various aspects of cellular functions, and to define the binding of antigenic peptides to MHC class I. For instance, photoreactive derivatives of cyclosporins have been used to demonstrate the binding of cyclosporins to cyclophilins, and subsequent complex formation with calcineurin (
58). Photoaffinity derivatives of antigenic peptides have been used to demonstrate that cell surface MHC class I glycoproteins do bind peptide antigens, and that this interaction takes place even in the absence of the αβ TCR (
59). Further, a photoreactive derivative of the
P. berghei antigenic peptide,
P.b. CS 249–260, bound to cell associated MHC class I molecules (
60), and was used to determine the peptide binding motif for the H-2K
d molecule (
61). The same photoreactive peptide has also been used to demonstrate that the avidity of TCR-ligand interactions is strengthened by CD8 on T cells (
62), and that CD8β (but not CD8α) was involved in p56 binding in lipid rafts. And recently, it was used to demonstrate that the α chain of the αβ TCR is involved not just in binding to the ligand, but is also involved in enhancing the CD8-TCR interaction (
63). Other photoreactive probes have been used to identify the nucleotide binding sites in human IL-2 (
64), GTP binding proteins that are biologically active in the T lymphocyte and thymocyte plasma membranes (
65), and the active sites of enzymes. These studies demonstrate the usefulness of photoaffinity ligands/antigens to identify and isolate interacting or binding proteins.
For our study, we used benzophenone compounds that were originally developed as analogs of farnesyl pyrophosphate (
40). These compounds are photoactivatable substrates for isoprenoid pathway enzymes such as farnesyl pyrophosphate synthase, farnesyl transferase, geranylgeranyl pyrophosphate synthase, and undecaprenyl pyrophosphate synthase, and can label these enzymes. Since we had shown that Vγ2Vδ2 T cells recognize farnesyl pyrophosphate (
5,
24), we reasoned that these analogs might also be recognized. Indeed,
m-BZ-C
5-OPP stimulated Vγ2Vδ2 T cells to proliferate like other prenyl pyrophosphates, even after photocrosslinking to the cell surface. This stimulation by
m-BZ-C
5-OPP (which has a large aromatic benzophenone moiety at the end of the 5 carbon alkenyl chain ()) is consistent with our finding that the carbon chain closest to the pyrophosphate moiety plays the critical role in determining Vγ2Vδ2 T cell stimulation (
21). The type of linkage and spacing from the benzophenone group was very important in determining bioactivity with the highest activity noted with ester linkage of the alkenyl pyrophosphate spaced 1 carbon from the benzophenone group. In many cases, Vγ2Vδ2 T cells could also distinguish between the
meta and
para isomers of BZ-(C)-C
5-OPP compounds similar to their ability to distinguish between the (
R)- and (
S)-stereoisomers of the chiral phosphoantigens, bromohydrin pyrophosphate and 3,4-epoxy-3-methyl-1-butyl pyrophosphate (
66) and the (
E)- and (
Z)- forms of HMBPP (
67). Recognition of
m-BZ-C
5-OPP also requires the pyrophosphate moiety, since the benzophenone (BZ) photophore and the 4-maleimide derivative of benzophenone (both lacking the pyrophosphate moiety) failed to stimulate Vγ2Vδ2 T cell proliferation. Thus, like synthetic and natural phosphoantigens (
21), recognition of
m/
p-BZ-(C)-C
5-OPP antigens is critically dependent on the phosphate moiety and adjacent alkenyl chain. Large moieties such as a benzophenone attached to the alkenyl chain or a ribonucleotide phosphate attached to the pyrophosphate group do not interfere with recognition if spaced sufficiently far away from the C
5-OPP structure.
Although, like bisphosphonates,
m-BZ-C
5-OPP binds to FPPS, it has only very low activity as an inhibitor requiring 250 μM for 20% inhibition of FPPS activity as compared with 20% stimulation of Vγ2Vδ2 T cells at a 2,500-fold lower concentration of 0.1 μM. Thus, it is likely to function as a direct antigen. Supporting this mechanism of stimulation of Vγ2Vδ2 T cells, the response of Vγ2Vδ2 T cells to
m-BZ-C
5-OPP is highly resistant to mevastatin inhibition. This is identical to prenyl pyrophosphate responses (
A, B) and unlike bisphosphonate and alkylamine responses which are very sensitive to statin inhibition ( and Wang and Morita, manuscript in preparation). The photoaffinity antigens can also stimulate Vγ2Vδ2 T cells in the absence of additional antigen presenting cells like prenyl pyrophosphates ( and ref.
24). Thus,
m/
p-BZ-(C)-C
5-OPP antigens function as direct antigens for Vγ2Vδ2 T cells rather than as indirect stimulators through pharmacological inhibition of FPPS.
Although recognition of
m-BZ-C
5-OPP by Vγ2Vδ2 T cells was specific and direct, it was not clear if the benzophenone photophore was crosslinking specifically or nonspecifically to the cell surface. To address this question, we used IPP and the biologically inactive pyrophosphonate analog of BrHPP, BrHPCP, to compete with
m-BZ-(C)-C
5-OPP antigens for binding to the APC surface. As expected if
m-BZ-(C)-C
5-OPP and IPP/BrHPCP were competing for the same specific binding sites, the stimulatory activity of photocrosslinked
m-BZ-(C)-C
5-OPP for γδ T cells was diminished in a dose dependent manner by the presence of IPP or BrHPCP during ultraviolet crosslinking. This result strongly suggests that IPP and
m-BZ-C
5-OPP compete for the same binding sites on the APC surface. Our results also would suggest an alternative explanation for the specific inhibitory activity of pyrophosphonate (methylene diphosphonate) and difluorodiphosphonate analogs of bromohydrin and iodohydrin pyrophosphate (
20). Since BrHPCP prevents the crosslinking of
m/
p-BZ-(C)-C
5-OPP compounds (), it likely competes for the same binding sites on the cell surface like IPP. We speculate that rather than blocking dephosphorylation of phosphoantigens due to their non-hydrolyzable phosphonate bonds, these phosphonate compounds compete for binding with prenyl pyrophosphate antigens to the proposed presenting molecule. Unlike phosphoantigens, bound pyrophosphonate compounds are not recognized by the Vγ2Vδ2 TCR because of their structural differences from pyrophosphate compounds. Such inhibition of binding would be predicted to result in antigen specific antagonism but not to affect Vγ2Vδ2 T cell mitogen responsiveness identical to what was observed (
20).
Prenyl pyrophosphates may bind to a plasma protein prior to their presentation at the APC cell surface. A soluble protein could bind IPP or HMBPP and inhibit presentation, to limit Vγ2Vδ2 T cell responses. Alternatively, a soluble protein could enhance presentation by binding IPP or HMBPP, and then transferring them to cell surface molecules for presentation. For example, apolipoprotein E binds the exogenous α–galactosyl ceramide lipid antigen for uptake and presentation by CD1d to αβ NKT cells (
68). In this study, we found that binding of
m-BZ-C
5-OPP to the APC, as measured by stimulation of γδ T cell proliferation, was inhibited by serum and by non-protein components of RPMI media. In the absence of serum and media components, natural prenyl pyrophosphate antigens, which were earlier reported not to associate with the APC cell surface (
24), could be shown to stably associate with APC. However, this association is not very efficient, since it required 100–1,000 fold more antigen during pulsing to achieve the same stimulation as observed when the antigen was continuously present. These results suggest that unknown components of serum and media can diminish the binding of the negatively charged prenyl pyrophosphate antigens to the APC surface. Apolipoprotein A1 has been proposed to bind to the Vγ2Vδ2 TCR to enhance recognition of the F1 ATPase β subunit (
69). It is possible that this lipoprotein interferes with prenyl pyrophosphate antigen binding to the putative presenting molecule. Serum albumin binding of the hydrophobic alkenyl chain of prenyl pyrophosphate could also compete for binding. Alternatively, this inhibition could be due to dephosphorylation of the antigens by alkaline phosphatase that is present in serum, since incubation of BrHPP with cells resulted in hydrolysis of the pyrophosphate moiety presumably through the action of cell surface alkaline phosphatase (
20). RPMI media contains divalent cations, amino acids, and other compounds that are absent in PBS and that might interfere with binding of pyrophosphate antigens to the APC surface.
In the absence of serum and media components, we found that the binding of prenyl pyrophosphate antigens with APC was rapid, being detectable within 5 minutes (the least amount of time required for experimental manipulation) (). This binding of pyrophosphate antigens with the APC likely takes seconds since we found that
14C-IPP binding with APC was extremely rapid, taking only 30 seconds (minimum time required for experimental manipulation) to achieve near maximal binding. Although rapid, IPP binding showed very low affinity and was difficult to accurately measure (data not shown). It is unlikely that the prenyl pyrophosphate antigens require internalization for presentation since they can be pulsed onto APC that have been fixed with glutaraldehyde, supporting our previous observations (
24).
Most tumor cells of human origin can present prenyl pyrophosphate antigens to Vγ2Vδ2 T cells (). These results, taken together with previous studies, might suggest that prenyl pyrophosphates associate nonspecifically with the APC cell surface for recognition. However, we and others have found that only APC of human origin can present nonpeptide prenyl pyrophosphate antigens to γδ T cells, since APC from mice and other species fail to stimulate Vγ2Vδ2 T cells (Table 1 and ref.
28,
30). Moreover, we now demonstrate that IPP and HMBPP can be pulsed onto the APC cell surface. Although the lack of presentation by xenogeneic cells could reflect species differences in accessory and/or costimulatory molecules (
28), these results rule out the simple model where prenyl pyrophosphate antigens associate with the APC cell surface nonspecifically to stimulate Vγ2Vδ2 T cells.
Earlier studies could not rule out that Vγ2Vδ2 T cells were presenting nonpeptide antigens to daughter Vγ2Vδ2 T cells since recognition required the continuous presence of antigen. Since we could covalently-link m-BZ-C5-OPP to the APC surface, human cell lines lacking known antigen presenting molecules could be tested for presentation of m-BZ-C5-OPP to Vγ2Vδ2 T cells in the absence of soluble antigen, thus ruling out antigen presentation by the Vγ2Vδ2 T cells. Using the m-BZ-C5-OPP photoaffinity antigen, we find that Vγ2Vδ2 T cells do not require classical MHC class I (HLA-A, HLA-B, and HLA-C), MHC class II, or CD1a, CD1b, CD1c, or CD1d molecules on APC for prenyl pyrophosphate recognition. These findings suggest that a novel cell surface molecule is functioning to present these antigens. However, this putative presenting molecule would be predicted to be widely distributed and non-polymorphic, given that most tumor cells (except for those lacking accessory molecules) can present antigen to Vγ2Vδ2 T cells despite coming from different tissues and different individuals.
Further supporting the existence of a presenting molecule is the restriction of recognition of prenyl pyrophosphate antigens to Vγ2Vδ2 T cells. We have shown that recognition is TCR mediated since transfection of Vγ2Vδ2 TCR cDNAs into the TCR
− mutant of the αβ T cell tumor, Jurkat, confers responsiveness to prenyl pyrophosphate antigens (
11), and since recognition is blocked by mAbs to the γδ TCR (
39,
70). Moreover, only Vγ2Vδ2 γδ T cell clones respond to the prenyl pyrophosphate antigens (
39,
71,
72). Mutation of the Vγ2Vδ2 TCR in the Vγ2 and Vδ2 CDR3 regions and other CDRs can abolish prenyl pyrophosphate recognition while preserving anti-TCR mAb responses (Wang and Morita, manuscript in preparation and 73, 74, 75). However, there is no evidence for direct binding to prenyl pyrophosphates to soluble Vγ2Vδ2 TCRs (data not shown and 19). And, unlike murine γδ TCR recognition of T22 MHC class Ib molecules (
76), there is no conserved amino acid motif in the Vδ2 CDR3 region that could mediate antigen binding. These results coupled with the small size of phosphoantigens (minimum recognition unit is methyl phosphate (
21)), support the existence of an antigen presenting molecule.
Among the various stimulating compounds for γδ T cells, we hypothesize that only prenyl pyrophosphates are directly presented on the APC cell surface to the Vγ2Vδ2 TCR. Supporting this assertion, prenyl pyrophosphate recognition can be extremely rapid (10 seconds) (
24,
25) and is not abolished by glutaraldehyde fixation of the APC (
24). In contrast, we and others have found that stimulation of human Vγ2Vδ2 T cells by bisphosphonates (
14–
16), alkylamines (
77,
78), and certain tumor cells (
16) is indirect and mediated by the intracellular accumulation of isopentenyl pyrophosphate. However, it is unclear how this intracellular isopentenyl pyrophosphate is detected at the cell surface. We speculate that there exists an intracellular pathway where the putative antigen presenting molecule encounters IPP (and perhaps HMBPP from intracellular pathogens) in the cell leading to their transport to the cell surface. Evidence that this pathway utilizes transport by multi-drug related protein 5 transport has recently been reported (
79). The ability to covalently attach a prenyl pyrophosphate analog to a molecule on the APC surface using photocrosslinking is, therefore, a significant advance and should assist in identifying this putative antigen presenting molecule for Vγ2Vδ2 T cells.