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Published online 2009 May 16. doi: 10.1186/1471-2164-10-227
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Copyright © 2009 Du et al; licensee BioMed Central Ltd.
This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
Table 2
Genes data statistics in plantsUPS
E1E2FboxSKPRING fingerBTBCullinUboxHECTRBX*DDB*Total
Arabidopsis247654214657910627251354
Rice6497022737812610768231387
Poplar670335153998113937351027
Soybean610741818725772412019231519
Grape34515310330638569nullnull677
Medicago240539362944112389nullnull1011
Maize**95932531401129611921nullnull1100
Six species have > 1000 UPS members. F-box and RING finger families are the most abundant gene families.
*BLAST search for RBX or DDB families may find no qualified hits in some species, and we present 'null' for such situations.
**For reasons of ongoing annotating and unexpected complexity in maize, the numbers here may not reflect the integrated UPS profile for maize.
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