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Logo of bmcgenoBioMed Centralsearchsubmit a manuscriptregisterthis articleBMC Genomics
 
From:
Published online 2009 May 16. doi: 10.1186/1471-2164-10-227

Table 2

Genes data statistics in plantsUPS

E1E2FboxSKPRING fingerBTBCullinUboxHECTRBX*DDB*Total
Arabidopsis247654214657910627251354
Rice6497022737812610768231387
Poplar670335153998113937351027
Soybean610741818725772412019231519
Grape34515310330638569nullnull677
Medicago240539362944112389nullnull1011
Maize**95932531401129611921nullnull1100

Six species have > 1000 UPS members. F-box and RING finger families are the most abundant gene families.

*BLAST search for RBX or DDB families may find no qualified hits in some species, and we present 'null' for such situations.

**For reasons of ongoing annotating and unexpected complexity in maize, the numbers here may not reflect the integrated UPS profile for maize.