In the year 2000, we identified the molecular cause of the most common among the micronodular BAHs, primary pigmented nodular adrenocortical disease (PPNAD) (
Kirschner et al., 2000). PPNAD is characterized by small, pigmented nodules that are surrounded by mostly atrophic cortex in an otherwise normal-sized gland (
Carney et al., 1985). Most cases of PPNAD, inherited or sporadic, are associated with Carney complex (CNC), a syndrome that causes abnormal skin and mucosal pigmentation in addition to a variety of tumors [myxomas of the skin, heart, breast and other sites, psammomatous melanotic schwannoma, growth hormone (GH)-producing pituitary adenomas, testicular Sertoli and Leydig cell neoplasms, thyroid tumors, breast adenomas, nevi, and, perhaps, colon and other cancers] (
Stratakis et al., 2001). CNC shares features with multiple endocrine neoplasia (MEN) and lentiginosis syndromes, such as MEN 1 and Peutz-Jeghers syndrome (PJS), and other hamartomatoses (
MRash and Stratakis, 2001). By linkage analysis we and others identified two loci harboring genes for CNC on 2p16 (
CNC2) and 17q22-24 (
CNC1) (
Stratakis et al., 2001). We then identified the
PRKAR1A gene from the
CNC1 17q22-24 locus (
Kirschner et al., 2000).
PRKAR1A encodes the regulatory subunit type 1A (R1α) of PKA, a molecule that is the main regulator of this cAMP-dependent protein kinase, one of the most important regulatory pathways in cellular signaling (
Amieux, 2002).
Following the identification of PRKAR1A gene mutations in PPNAD, we had, in addition to clinical and histopathological features, a molecular genetic marker that could be used to identify diagnostic subgroups of the BAH and CNC patients that we were working with (). This allowed us to identify significant genetic heterogeneity within patients that were previously thought to have one disease.
Before embarking on using the samples that were
PRKAR1A-mutation-negative to search for other genes, we wanted to eliminate the possibility that genetic defects that would not be identifiable by sequencing were present. Fluorescent in situ hybridization (FISH) with bacterial artificial chromosome (BAC) probes containing the
PRKAR1A gene did not show any large defects, but survey by restriction digestion and long-range PCR resulted in the identification of two chromosome 17q22-24 microdeletions among 36
PRKAR1A-mutation-negative unrelated kindreds (
Horvath et al., 2008). Based on this study, one would expect that about 6% of PPNAD and/or CNC patients that do not have a coding sequence mutation may still have a defect of the
PRKAR1A gene.
Among the remaining kindreds that did not have
PRKAR1A mutations, we then used the clinical and histopathological criteria that we developed and are listed in to identify subgroups of patients/families. First, we identified patients (10 kindreds) with micronodular adrenocortical disease (MAD) (
Gunther et al., 2004). Prior to the identification of the
PRKAR1A gene, MAD patients had been grouped together with those that had “classic” PPNAD, because even though pigment (lipofuscin) was not evident by regular microscopy, in some patients electron microscopy could identify pigment granules. It had been assumed, since most patients with MAD were very young (2 to 7 years old), that the lack of heavy pigmentation was a function of their age. However, following the identification of
PRKAR1A, it became clear that almost none of these patients had
PRKAR1A gene defects. Like PPNAD, MAD leads to corticotropin (ACTH)-independent hypercortisolism caused by small nodules randomly arising within the cortex of both adrenal glands of affected individuals. Most cases of non-pigmented MAD were isolated (iMAD – not associated with any other tumors or conditions), sporadic (patients did not have any family history) and occurred in very young children. Some patients had a presentation consistent with atypical Cushing syndrome; most patients were female; and, autosomal dominant inheritance could be documented in one kindred that had previously been mapped to the
CNC2 locus (CAR14).
Since most patients were sporadic, we teamed with investigators from a private bioinformatics enterprise to apply novel software (EXEMPLAR
®) for a GWA study that took into account the prior information of linkage to chromosome 2. Tetrads of samples were genotyped: the two unaffected parents, peripheral blood DNA and tumor DNA microdisected from the adrenal lesions of the proband; the single family (CAR14) and their tumor tissue were also genotyped. The Affymetrix
® 10K genechip was used (the study was done in 2006). By a combination of association analyses and the detection of gene dosage alterations, loss-of-heterozygosity (LOH) and amplification events, the 2q31-33 was identified as potentially harboring a susceptibility locus along with the previously identified 2p16-15 locus and other loci in the genome including regions on 5q, 8q, and others (these data are available on line at
http://www.nature.com/ng/journal/v38/n7/extref/ng1809-S8.pdf). These studies culminated in the identification of the phosphodiesterase (PDE) genes,
PDE11A (
Horvath et al., 2006) and, more recently,
PDE8B (Horvath et al., 2008b) from the 2q and 5q13 areas. Ongoing search includes the study of candidate genes from the locations that had the highest linkage
p values.
These published data and ongoing work suggest that
PDE11A inactivating defects are found in increased frequency in a subgroup of patients with PPNAD, iMAD and other forms of BAH and possibly other adrenal and endocrine tumors (Horvath et al., 2006b). Two frameshift mutations disrupting the
PDE11A4 adrenal-specific isoform protein (c.171Tdel/fs41X and c.1655_1657delTCTinsCC/fs15X) and a base pair substitution (c.919C>T p.R307X) were the first such
PDE11A gene variants that were reported (); in addition, two missense substitutions that are relatively frequent polymorphisms of the
PDE11A gene (c.2411G>A, p.R804H and c.2599C>G, p.R867G) were found in increased frequency among patients with adrenal lesions. We confirmed
PDE11A gene mapping to the 2q31-35 by FISH and tumors from patients with
PDE11A-inactivating mutations demonstrated 2q allelic losses (
Libe et al., 2008) ().
PDE11A is a dual-specificity PDE catalyzing the hydrolysis of both cAMP and cGMP; it is expressed in several endocrine tissues (
Boikos et al. 2008): the
PDE11A gene, like that of other PDEs, has a complex organization: only the A4 splice variant is expressed in adrenal, whereas A1 is ubiquitous, and A2 and A3 have a more limited expression pattern.
PDE8B codes for a PDE that has the highest affinity to cAMP among all known PDEs (Conti and Beavo, 2007). The locus harboring
PDE8B on 5q13 was also among the most likely regions to be associated with MAD in our GWA study and
PDE8B was highly expressed in the adrenal gland. We sequenced the
PDE8B-coding regions in all remaining patients with MAD and identified a single base substitution (c.914A>T or H305P) in a female (CAR559.03) who had Cushing syndrome () (
Horvath et al, 2008). The patient inherited the mutation from her father, who was obese and had hypertension, abnormal midnight cortisol levels, and on computed tomography mild hyperplasia (). The c.914A>T substitution was not present in more than 2,000 control chromosomes and the H305P mutation affects an evolutionary conserved residue ().
In vitro studies on HEK293 cells showed significantly higher cAMP levels after transfection with the mutant
PDE8B indicating an impaired ability of the protein to degrade cAMP ().
These studies identified mutations in a new class of genes, those coding for cAMP-binding PDEs, as predisposing to BAHs and possibly other adrenal tumors. The discovery reinforced the notion that aberrant cAMP signaling is tightly linked to genetic forms of cortisol excess that lead to Cushing syndrome. Ongoing work is aimed at testing other PDEs that bind cAMP for mutations in our patients. An important aspect of the
PDE11A studies was the recent identification of 3
PDE11A-inactivating (protein-truncating) mutations in a population of control patients that are being followed for the development of cancer (the New York Cancer Project, NYCP) with a combined frequency of 1.6%. Two functional
PDE11A missense substitutions, R804H and R867G, were present at much higher rates of 2.4% and 3%, respectively (Horvath et al., 2006b). These findings raised the possibility that carrying
PDE11A gene defects has wider implications that go beyond a predisposition to adrenocortical hyperplasia or tumors (
Libe et al., 2008).