Tissue processing
Brain tissue through the entire rostrocaudal extent of the amygdaloid complex from ten human cases was acquired for this study. Eight cases were acquired from the Brain and Tissue Bank for Developmental Disorders at the University of Miami School of Medicine in contract to the National Institute of Child Health and Development. Two cases were acquired from the Department of Pathology at the University of California, Davis School of Medicine. This study was approved by the Institutional Review Board of the University of California, Davis. Clinical characteristics of the ten cases are summarized in .
| Table 1Clinical characteristics of ten human cases in which the amygdaloid complex was analyzed. |
After removal of the brain from the skull, each brain was immersed in 10% buffered formalin for at least eight weeks prior to transfer to our laboratory. A proton-density weighted magnetic resonance imaging (MRI) scan was acquired on each of the ten brains with a 1.5 Tesla magnet at the UC Davis Imaging Research Center as previously described (
Schumann et al., 2001). A four centimeter block containing the entire rostrocaudal extent of the amygdala () was cut from one hemisphere and returned to 10% buffered formalin at 4 degrees Celsius. The amygdala tissue block was placed into a cryoprotectant solution (10% glycerol for two days and 20% glycerol for five days) in preparation for freezing. The tissue block was frozen with 2-methyl butane (isopentane) and serially sectioned into six series of 50 μm thick sections and two series of 100 μm thick sections. One 100 μm series was stained with 0.25% thionin (standard Nissl method) for further analyses.
The amygdaloid complex was outlined on every 100 μm Nissl section in which it was present (approximately 20-25 sections per case). The amygdaloid complex was further partitioned into five subdivisions: 1. lateral nucleus, 2. basal nucleus, 3. accessory basal nucleus, 4. central nucleus, and 5. remaining nuclei. A tenet of design based stereological techniques is that the entire area of interest must be reliably sampled. The first four individual nuclei could reliably be defined from case-to-case. Other regions of the amygdala, such as the periamygdaloid cortex, were highly variable across cases. Since a goal of this study was to get an estimate of total neuron number in the amygdala, all remaining regions of the amygdala were grouped into “remaining nuclei” that could be accurately outlined. Since there is no published protocol for outlining the entire human amygdala or its major subdivisions, a detailed description of our strategy is provided below.
Nissl-stained brightfield photomicrograph images () were acquired with a Nikon Photomacrography Multiphot system, the amygdaloid complex was outlined with Canvas 9 (ACD Systems Inc., Miami, FL), and images were adjusted for brightness and contrast with Adobe Photoshop 10 (Adobe systems Inc., San Jose, CA).
Definition of the human amygdaloid complex outer border
The rostral most section in which the amygdaloid complex was initially outlined was defined as the section in which the first appearance of either the lateral or basal nucleus occurred (). In this section, the periamygdaloid cortex, anterior cortical nucleus, and/or paralaminar nucleus, if present, were included in the outline. In some cases, portions of what appeared to be the periamygdaloid cortex, anterior cortical nucleus, and/or paralaminar nucleus were present rostral to this section. But these regions were not clearly definable and therefore were not included in the amygdala outline.
The starting point of the outline was the dorsolateral point of where the medial surface of the temporal lobe curves laterally (). From this point, a line was drawn ventrolaterally, including the anterior cortical nucleus, to the top of the lateral nucleus (or basal nucleus if no lateral nucleus was present). One exception to the above occurred if the ventral claustrum extended into the temporal lobe dorsal to the lateral nucleus and ventral to the anterior cortical nucleus. If the cluster of neurons in this area appeared continuous with the ventral claustrum, it was excluded as part of the amygdala outline. The outline continued along the lateral and ventral borders of the lateral and basal nucleus, then extended to the medial surface of the brain at the semiannular sulcus. The outline was completed by drawing along the medial surface of the temporal lobe to the starting point.
In progressively more caudal sections, additional nuclei appeared within the amygdaloid complex (). These included the accessory basal nucleus, located dorsomedial to the basal nucleus, and the nucleus of the lateral olfactory tract, which was visible in some cases ventral to the anterior cortical nucleus. The anterior amygdaloid area was also present dorsal to the lateral nucleus and ventrolateral to the anterior cortical nucleus. The outline was drawn from the dorsolateral most point of the medial surface of the brain to the dorsal border of the anterior amygdaloid area, then ventrolateral to the dorsal most point of the lateral nucleus and completed as described above.
At midrostrocaudal levels through the amygdaloid complex, the anterior amygdaloid area was no longer present (). Fiber tracts cut across the dorsolateral portion of the lateral nucleus. The basal nucleus also developed a large dorsal portion that appeared separated from the rest of the nucleus due to fiber tracts. The central nucleus appeared dorsal to the basal and accessory basal nuclei. The anterior cortical nucleus was replaced by the medial nucleus on the medial surface of the brain. The amygdala also had scattered intercalated nuclei that were included in the outline. The outline was drawn from the same starting point to the dorsal most point of the central nucleus, around the lateral surface of the central nucleus, until its ventrolateral extent was reached. The outline was then drawn to the dorsal extent of the lateral or basal nucleus, whichever extended further dorsal, and completed as described above.
When the optic tract extended further laterally than the medial surface of the brain, or extended the same distance laterally, the starting point of the outline became the dorsolateral extent of the optic tract (). The outline extended laterally from the starting point, dorsal to the medial nucleus and ventral to the substantia innominata, to the dorsal extent of the central nucleus and completed as described above. At this level, the amygdala was bordered dorsomedially by the substantia innominata, dorsolaterally by white matter, and ventrally by the hippocampus. The amygdala formed a portion of the medial surface of the brain adjacent to the optic tract. The temporal horn of the lateral ventricle often appeared along the lateral border of the lateral nucleus. The hippocampus was clearly separated from the lateral and basal nucleus by the paralaminar nucleus and the temporal horn of the lateral ventricle. The lateral and basal nuclei decreased in size in subsequent caudal sections. The outline at this level was drawn as described above.
At the caudal extent of the amygdaloid complex (), the amygdalohippocampal area appeared ventromedial to the basal and accessory basal nuclei and ventrolateral to periamygdaloid cortex. The amygdalohippocampal transition area was present medial to the basal nucleus and ventral to the posterior cortical nucleus as a dorsomedial extension of the hippocampus, and was not included in the amygdala outline. The outline at the caudal extent of the amygdala was drawn essentially as just described above for adjacent rostral sections. The ventromedial limit of the amygdaloid complex was located just ventral to the posterior cortical nucleus and dorsal to the amygdalohippocampal transition area. Sections were outlined until both the basal and accessory basal nuclei could no longer be identified. Although some variable portion of central nucleus, amygdalohippocampal area, and/or posterior cortical nucleus may still be present in sections located caudal to the basal and accessory basal nuclei, these were not clearly definable and therefore not included within the outline.
Delineation of the lateral nucleus
The lateral and ventral boundaries of the lateral nucleus were previously defined in the process of making the amygdala outer border outline. To define the dorsal and medial border, a line was drawn from the dorsolateral extent of the lateral nucleus at the existing outline and extended medially until the basal nucleus was reached to form the dorsal border (). This point was identified in two ways: 1) the dorsal extent of the border between the lateral and basal nucleus was marked by white matter slightly dipping ventrally between the two nuclei and 2) neurons in the dorsal portion of the basal nucleus were larger and darker than those of the adjacent lateral nucleus. The outline continued ventrally between the lateral and basal nucleus until the existing outline of the amygdala was reached.
At midrostrocaudal levels, the dorsolateral division of the lateral nucleus extended further dorsal than in rostral sections (). The dorsal and medial outline was drawn as described above for rostral sections. The medial border of the lateral nucleus, particularly in the ventral portion, was difficult to define. In addition to the suggestions above, another aid to delineate the lateral and basal nuclei was to find where the paralaminar nucleus, along the existing ventral border of the amygdala, extended dorsally between the two nuclei.
In more caudal sections, the lateral nucleus continued to decrease in size and was less fragmented by fiber tracts (). The outline was drawn as described above until the last section in which lateral nucleus was present ().
Delineation of the basal nucleus
Most of the lateral border of the basal nucleus was already present from the definition of the medial border of the lateral nucleus. The paralaminar nucleus remains ventral to the basal nucleus throughout most of the amygdala and the two nuclei are often difficult to distinguish. Therefore, for this study, the basal and paralaminar nuclei were combined into one contour and referred to as the basal nucleus. The ventral border of the basal nucleus was already present from the outer amygdala border outline.
In rostral sections, the outline of the basal nucleus began at the dorsolateral extent of the basal nucleus on the existing lateral border (). The outline then extended slightly dorsal to include the dorsal portion of the basal nucleus before continuing medially to complete the dorsal border. The outline continued ventrally to form the medial border of the basal nucleus until the existing ventral border of the amygdala was reached.
In more caudal sections, the basal nucleus increased in size (). The accessory basal nucleus formed the dorsomedial border with the basal nucleus and ventral to this, the basal nucleus was bordered medially by the periamygdaloid cortex. The ventromedial limit of the basal nucleus was associated with the medial extent of the paralaminar nucleus.
At midrostrocaudal levels, the dorsolateral portion of the basal nucleus was often encapsulated by white matter (). The outline was drawn from the dorsolateral extent of the main body of the basal nucleus on the existing outline as described above, continued to the dorsal tip of the main body, and extended to include the additional dorsolateral portion. The outline was drawn around the additional portion of the basal nucleus and continued back to the main body of the basal nucleus. The remaining outline of the basal nucleus was drawn as described above.
In more caudal sections, the basal nucleus decreased in size and the additional dorsolateral portion of the basal was fused with the main body (). The central nucleus was present at this level and separated from the dorsomedial portion of the basal nucleus by fibers.
In caudal sections, the amygdalohippocampal area replaced the periamygdaloid cortex as the ventromedial border of the basal nucleus (). The border between the amygdalohippocampal area and the ventral portion of the basal nucleus was often difficult to distinguish. Neurons of the amygdalohippocampal area were more homogeneously distributed, appeared darker, and more densely-packed than adjacent basal nucleus neurons. The medial extent of the basal nucleus continued to be defined by the medial extent of the paralaminar nucleus along the ventral surface of the amygdala. The outline at this level was drawn as described for rostral sections.
When the lateral nucleus was no longer present, the dorsal, lateral, and ventral borders of the basal nucleus formed part of the existing outer amygdala outline (). Surrounding structures included the central nucleus dorsally, accessory basal nucleus dorsomedially, temporal horn of the lateral ventricle laterally, and hippocampus ventrally. The outline of the basal nucleus at its caudal extent began at the existing outer amygdala outline, continued dorsomedially to the accessory basal nucleus, then ventromedially until the existing amygdala boundary was reached.
Delineation of accessory basal nucleus
The rostral extent of the accessory basal nucleus first appears dorsomedial to the basal nucleus (). The existing medial border of the basal nucleus forms the lateral border of the accessory basal nucleus. In general, accessory basal neurons are slightly smaller and more lightly stained than cells of the basal nucleus, and gradually decrease in size from dorsolateral to ventromedial. The periamygdaloid cortex was located medial to the accessory basal nucleus for the rostral two-thirds of the amygdala. The outline of the accessory basal nucleus began at its dorsolateral extent at the existing basal nucleus outline. The outline continued medially around the dorsal extent of the accessory basal nucleus, then ventromedially along the fiber tracts, and completed along the ventral border until the preexisting outline of the basal nucleus was reached.
At midrostrocaudal levels, the accessory basal nucleus was bordered dorsomedially by the medial nucleus and medially by the periamygdaloid cortex (). The central nucleus was located dorsomedial to the accessory basal, but was clearly separated from it by fiber bundles. The dorsal and medial boundaries of the accessory basal nucleus were drawn as described above for rostral sections.
In more caudal sections, the accessory basal nucleus was bordered dorsolaterally by the central nucleus, dorsomedially by the medial nucleus, medially by the posterior cortical nucleus, and ventromedially by the amygdalohippocampal area (). The outline began at the dorsolateral extent of the accessory basal nucleus on the existing border of the basal nucleus as described in previous sections, continued dorsally around the dorsal tip of the accessory basal nucleus, continued medially and ventrally to the amygdalohippocampal area, then completed ventrolaterally to the previously defined lateral border.
In most cases, the accessory basal nucleus extended to the caudal pole of the amygdala and, at these levels, was nearly completely surrounded by fiber tracts (). At this level, the basal nucleus appeared more ventral than lateral to the accessory basal nucleus. The outline of the accessory basal nucleus at the caudal extent began at the existing basal nucleus outline along the ventrolateral border of the accessory basal nucleus, continued dorsally around the dorsal tip of the accessory basal nucleus, then ventrally until the existing basal nucleus outline was reached.
Delineation of the central nucleus
The central nucleus was located in the dorsocaudal portion of the amygdala, and was nearly completely encapsulated by fiber tracts. A band of fibers also separated the nucleus into two subdivisions. The lateral subdivision was made up of small, more lightly stained neurons relative to most of the amygdaloid complex, but homogeneous and densely packed. The polymorphic neurons of the medial subdivision stained slightly darker than the lateral subdivision and they were more loosely packed.
At the rostral extent of the central nucleus, the lateral division generally appeared before the medial division (). The dorsolateral portion of the basal nucleus was present ventrolaterally and the accessory basal nucleus was situated ventromedially. The dorsolateral border of the central nucleus was part of the outer amygdala outline. The remaining outline began at the most lateral extent of the central nucleus on the existing outline and continued ventrally, medially, then dorsally around the central nucleus until the existing outline was reached.
At midrostrocaudal levels, the central nucleus increased in size and both the lateral and medial divisions were present (). The dorsal surfaces of the accessory basal and basal nucleus formed a groove into which the central nucleus fit. The existing outer amygdala outline formed the dorsal and lateral border of the central nucleus. The central nucleus outline began at the ventrolateral extent of the central nucleus along the existing outer amygdala outline. The outline continued dorsomedially along the fiber tracts that separate the central nucleus from the basal and accessory basal nucleus, then dorsally along the lateral boundary of the medial nucleus until the existing outline was reached.
The caudal most section in which the total amygdala was traced was also the last section in which the central nucleus was outlined. The outer amygdala outline formed the dorsal and lateral borders of the central nucleus at this level. The remaining ventral and medial borders of the central nucleus were marked by the encapsulating white matter. The outline began at the ventrolateral extent of the central nucleus on the existing outer amygdala outline. The outline then continued medially and dorsally, along the white matter. The outline was completed along the white matter to the existing outer amygdala outline.
Delineation of remaining nuclei
The remaining amygdala nuclei were all other nuclei within the outer boundary of the amygdaloid complex that were not individually outlined. The remaining nuclei included the anterior cortical nucleus, anterior amygdaloid area, nucleus of the lateral olfactory tract, periamygdaloid cortex (), medial nucleus, posterior cortical nucleus, amygdalohippocampal area, and intercalated nuclei ().
Stereological sampling techniques
All measurements were made using a Nikon Eclipse 600 microscope attached to an Optronics camera with Microfire software (Goleta, CA), which was connected to a Dell Precision 450 workstation using Stereoinvestigator software (Microbrightfield, Inc, Williston, VT). The neuroanatomical limits of each of the regions were first defined, as described above, at low magnification with a 1× (0.04 NA) objective.
The volume of each region was estimated using the Cavalieri method. This tool is implemented by randomly overlaying a lattice of points over each section and then counting the number of points in the lattice that lie within the region being measured. A grid spacing area of .04 mm2 (200 μm distance between points) was used to measure the area of each region. Volume was calculated by multiplying the area by the average measured section thickness for each region and subject.
An optical fractionator method was used to estimate the number of neurons in each subdivision of the amygdaloid complex at high magnification with a 100× (1.30 NA) oil objective (). This technique involved counting neurons with optical disectors, a three-dimensional probe placed through a reference space (
Gundersen, 1986;
West et al., 1991). This method is independent of volume measurements and therefore unaffected by tissue shrinkage that takes place during any stage of tissue preparation. A neuron was counted if the nucleus associated with that neuron first came into focus within the optical disector counting frame (i.e. a neuron was not counted if the nucleus associated with that neuron came into focus within the guard zone or if the nucleus was touching the left or bottom side of the disector frame). The guard zone is an area at the top and bottom of the histological section in which neurons are not counted to avoid errors in estimation due to cutting artifact. Total section thickness was measured at every other counting frame site.
A pilot study of three cases was first carried out to determine an optimal sampling scheme. The precision of the estimate expressed as the coefficient of sampling error (CE) was calculated to determine the appropriate number and size of disector counting frames (
Gundersen and Jensen, 1987;
Gundersen et al., 1999). The CE is the variation in sampling within each individual and reflects the precision based on how intensely each individual is sampled. The CE may be improved by sampling more sections within each individual or sampling more disector sites within each section. Our goal was to reach a CE (Gundersen CE where m=1) of less than 10% (
Gundersen and Jensen, 1987;
Gundersen et al., 1999).
Optimal spacing of the counting frames (grid size) depended on the area of the amygdala subdivision being measured. The counting frame area (in μm2) and grid size (in mm2) for each region is summarized in . The optical disector height (thickness) was 9 μm with a 3 μm top and bottom guard zone. Optimal disector and guard zone height was determined after measuring that the average post-processing thickness of the tissue ranged from 15-20 μm per section. The mean section thickness measured at each disector site was used for final calculation of neuron number for each subdivision of the amygdaloid complex. The estimation of neuron number was calculated by the product of the total number of neurons counted at the disectors, the section sampling fraction (number of sections/total area), the area sampling fraction (area of section sampled/total area), and the thickness sampling fraction (section thickness/disector height).
| Table 2Stereological sampling parameters for neuron number measurement with the optical fractionator method in each subdivision of the human amygdaloid complex. |