Since at least 1970 it has been recognized that the ANoA staining pattern of ANA was associated with SSc. ANoA actually comprises a group of mutually exclusive and heterogeneous autoantibodies that exhibit a typical nucleolar staining pattern of ANA by IIF on various cells (most often HEp2 cells) [
1]. They include anti-PM-Scl, anti-Th/To, anti-U3-RNP, AFA, and anti-RNAP I, anti-RNAP II, and anti-RNAP III. Anti-RNAP II and anti-RNAP III do not always yield a nucleolar staining pattern by IIF.
ANoA have been reported in 15–40% of patients with SSc [
39,
73]. Unlike with ACA and anti-Scl-70, the number of published studies on frequency of ANoA is relatively small. Nevertheless, specific ANoA are rarely seen in healthy controls [
1,
74] nor in healthy non-affected relatives of patients with SSc [
75]. ANoA are perhaps less specific for SSc than was previously thought, because they can be found in patients with other diseases such as SLE and Sjögren syndrome [
76,
77].
Anti-PM-Scl antibodies were the first of the AnoA to be characterized in 1977. Originally discovered in patients with myositis/scleroderma overlap syndrome (PM/SSc) with the use of Ouchterlony ID techniques [
78], anti-PM-Scl are usually identified by IP techniques today [
77]. Recently, the anti-PM-Scl autoantibodies have been shown to target six human exosome components that make up an RNA-processing complex, namely hRrp4p, hRrp40p, hRrp41p, hRrp42p, hRrp46p and hCs14p. hRrp4p and hRrp42p are most frequently targeted by the anti-PM-Scl antibody [
79]. The frequency of anti-PM-Scl varies between different ethnic groups, ranging from about 3% of patients with SSc and 8% of patients with myositis in Caucasians [
1,
78], to being absent from a large series of 275 Japanese patients with SSc [
43].
Anti-PM-Scl antibodies have been associated with the PM/SSc overlap syndrome [
80,
81]. As many as 80% of patients with anti-PM-Scl antibodies will have a PM/SSc overlap syndrome [
81]. Anti-PM-Scl antibodies are found in as many as 50% of patients with PM/SSc overlap in comparison with less than 2% of patients with SSc in general [
2,
5]. The PM/SSc-associated overlap syndrome is associated with a more benign and chronic course of disease and responds to a low to moderate dose of corticosteroids [
80]. Anti-PM-Scl antibodies predict limited cutaneous involvement when they are present [
43,
75,
82], although less reliably than ACA. This is likely to be secondary to the relative infrequency of anti-PM-Scl antibodies compared with ACA, reported in less than 15% patients with lcSSc [
43,
75,
82]. Anti-PM-Scl antibodies are strongly linked to
HLA-DQA1*0501 and
HLA-DRB1*0301 [
54] (Table ).
After the discovery of anti-PM-Scl antibodies, the refinement of IP assays using [
32P]orthophosphate or [
35S]methionine-labeled cell extracts allowed the recognition of another ANoA, anti-Th/To, in 1983 [
4,
83]. The Th/To antigen has recently been identified. Anti-Th/To antibodies are directed against components of the ribonuclease MRP and ribonuclease P complexes, more frequently Rpp25 and hPop1. The Th40 autoantigen is identical to Rpp38 protein [
84]. Anti-Th/To are present in about 2–5% of patients with SSc, being perhaps more common in the Japanese, and were previously virtually never seen in healthy control patients (less than 1%) [
47]. This no longer seems to be so, because anti-Th/To antibodies have also been described in patients with SLE, PM and primary Raynaud's phenomenon [
76,
77]. Anti-Th/To antibodies are also almost never seen in the presence of ACA [
76]. Like ACA, their presence most specifically predicts limited skin involvement [
47,
75,
76,
84], although routine testing is hardly useful as anti-Th/To autoantibodies are found so infrequently (Fig. ).
Because of the low frequency of anti-Th/To antibodies, few studies have addressed their clinical significance. One report found that no particular clinical features were associated with anti-Th/To [
47]. In another, anti-Th/To-positive patients with lcSSc carried a worse prognosis [
85] with a smaller frequency of joint involvement but a greater frequency of puffy fingers, small bowel involvement, hypothyroidism, and a greater risk for reduced survival at 10 years [
85], succumbing primarily to pulmonary arterial hypertension. In still another study, anti-Th/To antibodies were described in those patients with SSc who developed the combination of scleroderma renal crisis and pulmonary hypertension without interstitial lung disease [
86]. In a study of sera from 172 patients with various CTD [
77], anti-Th/To antibodies were increased in those patients with xerophthalmia, esophageal dysmotility and decreased DL
CO. The presence of anti-Th/To antibodies has been associated with
HLA-DRB1*11 [
55,
87] (Table ).
Anti-RNAP I, anti-RNAP II, and anti-RNAP III were not discovered until 1987 and 1993 [
7,
88]. Determined by IP techniques, these specific autoantibodies are found in about 20% of patients with SSc [
5,
82,
89] and, like other disease-specific autoantibodies, carry diagnostic and prognostic value. The specificity of anti-RNAP I and anti-RNAP III for SSc is similar and higher than that of anti-RNAP II, which can also be found in patients with SLE/SSc and overlap syndrome [
90]. Anti-RNAP I and anti-RNAP III almost invariably coexist [
5,
82,
89].
Anti-RNAP antibodies are associated with diffuse cutaneous involvement and have the highest likelihood of being associated with dcSSc than any other disease-specific autoantibodies apart from anti-Scl-70 [
7,
43,
82,
88,
91,
92]. They are found in about 40% of patients with dcSSc. The presence of anti-RNAP II antibodies has been found to independently predict lower lung function, even when ethnicity, age, smoking history, and disease duration were considered simultaneously [
64], although this is not uniformly seen [
7].
Anti-RNAP antibodies, like anti-Scl-70 antibodies, are correlated with a higher rate of SSc-related mortality, though not independently so. There exists a highly significant association between anti-RNAP antibodies and right heart failure unrelated to pulmonary fibrosis (probably related to pulmonary hypertension), which accounts for this increase [
66].
Anti-RNAP I, anti-RNAP II, and anti-RNAP III were found to be associated with
HLA-DQB1*0201 in one study, and no HLA association was seen in another [
91,
93] (Table ).
In 1985, anti-U3-RNP antibodies were isolated by IP techniques [
94]. More recently it was shown that the mammalian U3 small nuclear RNP (snRNP) is one member of a family of nucleolar snRNPs that are immunoprecipitable by anti-fibrillarin autoantibodies [
95]. AFA are present in about 4% of patients with SSc and are mutually exclusive with ACA, anti-Scl-70, and anti-RNAP [
96]. AFA have also been described in patients with SLE, UCTD, and primary Raynaud's phenomenon [
77]. The frequency of AFA is much higher in patients of African descent with SSc and is reported to be as high as 16–22% compared with only 4% in Caucasian patients with SSc [
40,
88,
95]. AFA are highly specific for dcSSc [
1,
40,
43,
47,
92,
96] and when found in African American patients with SSc are virtually always associated with dcSSc [
40,
89,
96]. Their presence in Caucasian patients with SSc is associated with diffuse skin involvement, but the correlation is not nearly as strong [
96]. AFA-positivity in those patients with dcSSc also has been associated with myositis, pulmonary hypertension, and renal disease. These autoantibodies also identify a younger subset of SSc patients with frequent internal organ involvement. However, in patients with lcSSc the presence of AFA did not predict pulmonary hypertension. Strangely, for its degree of internal organ involvement, AFA were not associated with a higher mortality rate, although those who died tended to succumb to pulmonary hypertension [
96].
Although not seen in all studies [
93], the autoantibody response to U3-RNP was associated in one study with
HLA-DQB1*0604 [
40] (Table ).