The results presented herein add further support to the concept that the competence regulons of
S. mutans are interconnected with critical virulence attributes and that competence pathways have evolved to efficiently detect environmental cues and quorum-sensing molecules to govern a complex regulatory network. In this study, two TCS, CiaRH and ComED, have been shown to coordinate multiple environmental signals to control the expression of
com genes and development of competence. The involvement and interrelationship of these two regulatory systems in competence for natural genetic transformation has been studied in
S. pneumoniae (
2,
10) but has not been examined in detail in
S. mutans. Clearly, CiaRH and ComED function in a hierarchical and cooperative fashion to optimize expression of selected competence genes. Our results also highlight critical differences between strains of
S. mutans in terms of the importance and requirement for ComC and ComED in acquisition of exogenous DNA, as well as in biofilm formation and growth at low pH.
Interestingly, strains with mutations in
ciaH and
ciaR in
S. mutans UA159 showed obviously different behaviors in various cellular functions, such as acid tolerance, biofilm formation, and competence development. Also, inactivation of
ciaH caused up-regulation of
htrA expression by about 2 logs, revealing a molecular connection between the stress response pathways, signal transduction, and competence development. Importantly, though, the behavior of the
ciaH mutant was dramatically different than that of the
ciaR mutant. These results strongly support the possibility that CiaH, which is believed to act on its cognate RR CiaR, can also regulate gene expression via at least one additional RR to control competence development, biofilm formation, and stress tolerance. Different behaviors of
ciaH and
ciaR mutants have previously been observed in strain UA140 of
S. mutans with some minor differences (
57) from our findings. The
ciaR mutant of UA159 significantly reduced acid tolerance at pH 5.4, but not at pH 6.4. Also, the
ciaH mutant of UA159 reduced sucrose-independent biofilm formation by about 80%, but in medium supplemented with sucrose, biofilm formation was enhanced by about 20%. The
ciaH strain derived from UA140 displayed a defect in sucrose-dependent biofilm that was ascribed to poor adhesion to the substratum.
In our study, a double mutant of
ciaR and
ciaH was also constructed. Surprisingly, this strain behaved more like a
ciaR single mutant in terms of acid tolerance but did not behave uniformly like the CiaH-deficient strain in terms of biofilm formation, competence development, and expression of
htrA (data not shown). The basis for this behavior is likely complex and could arise from the fact that loss of one response regulator could impact the utilization of remaining effectors. Nonetheless, a reasonable interpretation of our results is that CiaR has roles in regulation of acid tolerance and possibly other cellular physiology functions that are independent of the CiaH signaling cascade and arise as a result of cross talk between the Cia system and other TCS. This idea is clearly supported by our results showing effects of CiaH on expression of ComCDE. It is also noteworthy that inactivation of
ciaH could have effects on the phenotypic behavior of
S. mutans UA159 through changes in the level of expression of
htrA. We previously showed that the levels of HtrA in the cell are tightly controlled and that overexpression of
htrA on a plasmid had a profound impact on growth. Also consistent with this idea is that some phenotypes caused by deficiency of CiaRH in
S. pneumoniae were apparently due to alterations in the levels of HtrA, a surface-localized serine protease (
22). The effects on cell behavior could arise through changes in the efficiency of secretion of selected molecules or by alterations in the posttranslational modification of signaling molecules or sensing systems catalyzed by HtrA (
11,
44,
54,
59), which has also been implicated in processing of the CSP precursor (
59).
Our results also demonstrate that the ComED TCS, which has been shown to be essential for development of competence in
S. mutans NG8 (
39), is regulated by CiaR/H. Mutation of
ciaH significantly reduced the expression of
comED, which appears to be negatively regulated by CiaH in
S. pneumoniae (
14,
45), suggesting that the
cia regulatory system may be located upstream of ComED in the regulatory cascade. Our results also support that expression of
comED can be autoregulated by ComE, indicating that there are at least two points for control of ComE/D production. Unlike what we observed for CiaRH, ComED does not seem to control other critical virulence attributes beside competence in strain UA159. This finding contrasts with previous reports for
S. mutans NG8 (
36,
39), in which mutations in
comD or
comE were shown to significantly affect biofilm formation and acid tolerance. Clearly though, the role of
comCDE in transformation in UA159 has been conserved, as it has for
S. mutans NG8 (
36,
39) and
S. pneumoniae (
9), as evidenced by diminished transformation frequencies in strains with mutations in
comE or
comD. ComD- or ComE-deficient strains of UA159 fail to respond to exogenous CSP with enhanced transformability, unlike the
ciaH mutant. Thus, ComED in UA159 has retained the quorum-sensing function for competence development, but control of virulence attributes by these two TCS occurs primarily through CiaH.
The treatment of
S. mutans with CSP dramatically increases induction of competence (
1,
39), and many competence-associated genes have been known to be CSP responsive (
53). However, our real-time PCR and transformation data clearly show that treatment with exogenous CSP, in the absence of horse serum or BSA, dramatically enhances the transformation frequency in the absence of induction of competence genes. Interestingly, mutation of
comC in UA159 had no effect on transformation, in contrast to
S. mutans NG8, in which inactivation of
comC resulted in a competence-deficient phenotype (
19,
39,
41). In addition, the
comC mutant of UA159 had no effect on biofilm formation and a slightly reduced growth rate, which is also different from what was reported for strain NG8. These results suggest that
comC is not absolutely required for genetic transformation of UA159, despite the fact that addition of excess synthetic CSP has a profound effect on the frequency of transformation. We also found that expression of
com genes, including
comED,
-X, and -
YA, showed no significant differences between the wild type and the
comC mutant over different cell densities (data not shown). Thus, there is likely a basal level of transcription of the genes for competence development that occurs independently of ComC peptide sensing. This is supported by our real-time PCR data showing constitutive expression of selected
com genes in the absence of CSP, horse serum, or BSA. We have not been able to identify a second
comC gene in the
S. mutans genome, although recent studies with pneumococci indicate that this is a distinct possibility and also reveal that there are genetic polymorphisms in the competence quorum-sensing systems of streptococci (
21,
55). Moreover, we also found that the expression of the
comC gene is controlled by CiaH, which was shown to be involved in regulation of
comED. Thus, the deficiency of transformation arising from mutation of
ciaH may involve changes in the basal expression level of
comC when the assays are performed in the absence of CSP and HS.
A particularly important discovery in this study is that induction of the competence genes with CSP treatment was achieved only in the presence of serum proteins, such as HS or BSA. In previous studies (
12,
49,
56), serum proteins from horses, calves, and swine, as well as serum albumin, have been reported to stimulate the transformation of
S. mutans; however, this does not appear to be the case for
S. mutans UA159. On the other hand, the addition of CSP, the processed form of ComC, clearly induces a dramatic increase in transformation efficiency. However, CSP alone is not sufficient to signal major changes in competence gene expression. Therefore, our studies reveal that
S. mutans requires two inputs to achieve marked changes in
com gene expression, perhaps reflecting a need in vivo to integrate CSP-dependent quorum sensing with the detection of specific host molecules.
Based on our results and existing evidence, we present a working model of the way in which exogenous signals are integrated into gene networks controlling transformation, biofilm formation, and stress tolerance in S. mutans UA159 through CiaRH and ComED (Fig. ). In this working model, the network is separated into two circuits, CSP dependent and CSP independent. CiaRH and ComED control competence development and com gene expression in a hierarchical and cooperative fashion, responding to CSP and a serum-rich environment. We hypothesize that ComED is the primary conduit for sensing of CSP, while CiaH integrates signals detected in serum components and possibly other peptide/protein-rich environments. We also hypothesize the presence of a third response regulator which integrates the signals derived from CiaH. The model does not exclude the possibility that ComE is also a target for CiaH, but evidence we have accumulated to date supports that the effects of inactivation of ciaH on stress resistance are, at least in large part, CiaR independent. Also, unlike in strain NG8, the ComCDE pathway is not linked to the stress tolerance and biofilm component of our model. We have not yet integrated the role of processing of the CSP precursor into our model, which has been suggested to be performed by ComA/B but is also possibly influenced by HtrA levels. It should also be noted that we cannot exclude the existence of the secondary CSP(s).
Clearly, S. mutans has evolved to integrate quorum and environmental sensing through TCS, not only for control of the acquisition of exogenous DNA but also as regulatory systems that are critical to expression of key virulence attributes: formation of tenacious biofilms and tolerance of low pH. One reason for maintenance of these pathways for detection of these signals may be to integrate endogenously produced quorum signals, such as ComC, with detection of host molecules. For example, CiaH may modulate gene expression in response to the presence of peptides released from salivary proteins or from other bacteria in the complex biofilms on the tooth surface, or even another peptide quorum-sensing molecule produced by S. mutans that is mimicked by serum preparations. Similarly, CiaH could serve to detect serum-specific components present in gingival crevicular fluid or to which the organisms are exposed when they enter the circulation. Identification of the extracellular targets of CiaH and the RR that may be modified by CiaH will be essential to completely dissect the regulatory network so as to understand fully how these systems coordinate competence, biofilm formation, and stress tolerance.