PMCCPMCCPMCC

Search tips
Search criteria 

Advanced

Logo of mmbrPermissionsJournals.ASM.orgJournalMMBR ArticleJournal InfoAuthorsReviewers
 
From:
doi: 10.1128/MMBR.70.1.157-176.2006
TABLE 3.
Consensus sequences of repeating units present in the N- and/or C-terminal domain of GS enzymes from LABa
RepeatsStrainsGene(s)Consensus sequenceDesignationReference(s)
N-terminalL. mesenteroides NRRL B-1355asrWYYFDNNGYAVTLGLQTINGQHLYFDANGVQVKGPartial A repeats79
L. mesenteroides NRRL B-512FdsrTTDDKA(A/T)TTA(A/D)TSMotif T56
L. mesenteroides NRRL B-1299dsrEPA(A/T)DKAVDTTP(A/T)TMotif S17
L. reuteri 121gtfAR(P/N)DV-X12-SGF-X19-22-R(Y/F)SRDV repeats97
L. sakei Kg15, L. fermentum Kg3gtfKg15, gtfKg3NDGYYFXXXGXXH°X(G/N)H°H°H°YG repeat95
L. parabuchneri 33gtf33TTTQN(A/T)(P/A)NN(S/G)N(D/G)PQSTTQ repeat95
C-terminalS. downei MFe28gtfSWYYFNXDGQAATGLQTIDGQTVFDDNGXQVKXGA repeats8, 61, 171
S. downei MFe28gtfIVNGKTYYFGSDGTAQTQANPKGQTFKDGSVLR FYNLEGQYVSGSGWYB repeats48
S. downei MFe28gtfSDGKIFFDPDSGEVVKNRFVC repeats8, 61
S. salivarius ATCC 25975gtfJGGVKNADGTYSKYD repeats60
S. mutans GS-5, S. downei MFe28, S. salivarius ATCC 25975, S. sobrinus 67158 genesNDGYYFXXXGXXH°X(G/N)H°H°H°YG repeat58, 87
L. parabuchneri 33gtf33AVK(T/A)A(K/Q)(A/T)(Q/K)(L/V)(A/N)K(T/A)KAQ(I/V) (A/T)KYQKALKKAKTTKAK(A/T)QARK(S/N) LKKA(E/N(T/S)S(F/L)(S/T)KA)KYQ repeat95
aBoldface indicates conserved amino acids; RDV, KYQ, and TTQ residues are underlined; X, nonconserved amino acid residue.
Articles from Microbiology and Molecular Biology Reviews : MMBR are provided here courtesy of
American Society for Microbiology (ASM)