The objectives of this study were to identify efflux pump genes that are associated with antimicrobial resistance in
Campylobacter and to determine the roles of these efflux pumps and the DNA
gyrA point mutation in fluoroquinolone resistance in
Campylobacter. Ten putative efflux pump genes were identified based on bioinformatics data. We were not able to amplify these genes from all
Campylobacter strains tested, indicating a diverse genetic background within and between
C. jejuni and
C. coli. In strains that did amplify these genes by PCR, they did not show PCR bands with the same densities under common culture conditions. Some genes appeared to be constitutively expressed and were common in all the strains tested. These were the genes for Cj0035c, Cj1031/Cj1032/Cj1033, Cj0619, and CmeABC. In addition to the 10 pumps reported in the present study, we examined Cj1296/Cj1297/Cj1298 and Cj1375 but were not successful in generating insertional mutants. Cj1296/Cj1297/Cj1298 is a cluster of hypothetical antimicrobial efflux pumps that is absent in
C. jejuni 81-176. Cj1375 is a putative member of the MFS family of efflux pumps, which shared similarity with a quinolone resistance NorA protein in
Staphylococcus aureus (
27) and Cj0035c.
We further constructed individual insertional mutations at the 10 identified loci, representing a total of 16 efflux genes. Only mutations in
cmeB altered susceptibility to the tested antimicrobials, decreasing MICs by 4- to 256-fold. Additionally,
cmeB inactivation in several resistant strains converted MICs to susceptible levels for ciprofloxacin, erythromycin, and tetracycline. No significant changes in MICs were associated with the other nine putative efflux pumps. These pumps may be responsible for the extrusion of antimicrobials other than the tested or nonantimicrobial substrates. Our findings support the notion that CmeABC constitutes the major multidrug efflux pump system in
Campylobacter. A closely related gene cluster in the same RND family—
Cj1031/
Cj1032/
Cj1033, which also possesses structural similarity to AcrD in
E. coli—did not show anticipated decreases in MICs. This agrees with a recent study by Pumbwe et al. showing that Cj1033 (also termed CmeF, a component of the efflux system CmeDEF in
Campylobacter) does not transport ciprofloxacin (
34). In similar studies of
E. coli, only
acrAB or
tolC mutants resulted in significant increases in susceptibilities to a broad range of antimicrobials and compounds tested (
28,
41).
To confirm that the mutagenesis procedure did not affect two target genes,
gyrA and 23S rRNA, in which certain point mutations are associated with ciprofloxacin and erythromycin resistance in
Campylobacter, DNA sequencing of these genes of parent and mutant strains was conducted, and no change in the DNA sequences was identified. However, although no point mutations were found in 23S rRNA, the erythromycin MICs of
C. coli 124 and 241 and
C. jejuni 81-176ery were all above the MIC breakpoint (8 μg/ml), indicating the significant role of efflux pumps in erythromycin resistance in
Campylobater. This was further confirmed by a greater decrease in erythromycin MICs after the
cmeB gene was inactivated. Our results are similar to those of Mamelli et al., who reported possible efflux pump involvement in erythromycin resistance based on the finding that an efflux pump inhibitor resulted in significantly increased susceptibilities of the
C. jejuni reference strain NCTC11168 and several erythromycin-resistant isolates (
22).
In
C. jejuni, point mutation of Thr-86-Ile in
gyrA, which is homologous to Ser-83-Leu in
E. coli, was predominantly observed in both clinical and laboratory-derived strains with high-level resistance to ciprofloxacin. Other reported mutations of
gyrA in
C. jejuni included Ala-70-Thr (
46), Thr-86-Ala (low-level resistance to ciprofloxacin and high-level resistance to nalidixic acid) (
1,
24), Thr-86-Lys (
19), Asp-90-Asn (
1,
12,
31,
32,
46), and Pro-104-Ser (
12). Double mutations of
gyrA combining Thr-86-Ile and Asp-85-Tyr (
24), or Asp-90-Asn (
12,
31) or Pro-104-Ser (
12,
32), have been reported. The role of mutation in
gyrB has also been examined (
1,
31,
32) but is not yet documented in
Campylobacter. Mutation of Arg-139-Gln in
parC has been reported in
C. jejuni by Gibreel et al. (
10); however, subsequent studies reported by other investigators failed to confirm that
Campylobacter possesses a
parC gene (
1,
19,
29,
32). Despite all these observations, direct genetic evidence showing the cause-effect relationship between
gyrA mutation and fluoroquinolone resistance in
Campylobacter is lacking.
We adopted an insertional-mutagenesis method and introduced a Campylobacter Cmr cassette and a point mutation of gyrA at the chromosomal level to examine the effects of such alterations on the susceptibilities of C. jejuni to fluoroquinolones. It appears that the insertion of a Cmr cassette into the gyrA upstream gene Cj1028c did not have any detectable effect on the susceptibility of C. jejuni strains to either ciprofloxacin or nalidixic acid. Point mutation at codon 86 of gyrA significantly increased the MICs of the drugs for C. jejuni mutants. In addition, when the wild-type gyrA allele replaced the mutated copy in fluoroquinolone-resistant C. jejuni strains, the MICs showed significant decreases, although to a lesser extent for ciprofloxacin. This clearly demonstrated a direct causal effect between the Thr-86-Ile point mutation in gyrA and fluoroquinolone resistance.
In this study, we also conducted an in vitro spontaneous-mutation selection procedure for the parent strains
C. jejuni 81-176 and 81-176G. As expected,
C. jejuni 81-176cip and 81-176Gcip acquired 1,024- and 32- to 64-fold increases in the MICs of ciprofloxacin and nalidixic acid, respectively, and both strains possessed double mutations at codons 86 and 90 in
gyrA. When point mutation of
gyrA codon 86 was introduced into the parent strains
C. jejuni 81-176 and 81-176G, 128- and 32- to 64-fold increases were observed in the MICs of ciprofloxacin and nalidixic acid, respectively. The difference in changes of ciprofloxacin MICs between induction and genetic-manipulation mutants indicated that double mutations at both codons resulted in higher MICs and, more significantly, that other mechanisms, such as overexpression of efflux pumps, may have been involved during the induction procedure. In the study reported by Pumbwe et al., 9 out of 32 multidrug-resistant
C. jejuni isolates had a mutation at CmeR (Cj0368c, a putative regulator for CmeABC) and overexpressed CmeB and 8 out of 32 were ciprofloxacin resistant but had no mutation in
gyrA (
34).
To our knowledge, this is the first study that has examined the effect of cmeABC gene inactivation in Campylobacter wild-type strains resistant to clinically important drugs, ciprofloxacin and erythromycin, as well as in C. coli. Our findings provided genetic evidence that CmeABC is an important efflux pump in antimicrobial resistance in Campylobacter; that a single point mutation, Thr-86-Ile, can render Campylobacter resistant to fluoroquinolones; and that these two mechanisms work synergistically in conferring antimicrobial resistance on Campylobacter.